RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CENPTQ96BT3 561 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 CPVLQ9H3G5 476 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 TOPAZ1Q8N9V7 1692 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 TMEM120BA0PK00 339 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 TMEM110-MUSTN1A8MSY1 372 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 ALDH3A1P30838 453 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 DYNLL1P63167 89 aaKnown RBP14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 MRPS35P82673 323 aaKnown RBP14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 ZNF513Q8N8E2 541 aaPredicted RBP14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 TTC8Q8TAM2 541 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 PABPC3Q9H361 631 aaKnown RBP14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 PICK1Q9NRD5 415 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 METTL5Q9NRN9 209 aaKnown RBP14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 HAO1Q9UJM8 370 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 hCG_2014768A0A024R1R8 64 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 LIN7AO14910 233 aaPredicted RBP14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 CALML3P27482 149 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 RCN2Q14257 317 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 CNGA2Q16280 664 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 SLC5A9Q2M3M2 681 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 TCERG1LQ5VWI1 586 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 CCDC24Q8N4L8 307 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 ACTRT1Q8TDG2 376 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 DNAJC9Q8WXX5 260 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 FGD4Q96M96 766 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 GORASP1Q9BQQ3 440 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 STX2P32856 288 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 SCNN1BP51168 640 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 TAOK1Q7L7X3 1001 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 ZC3H18Q86VM9 953 aaKnown RBP14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 GALNT15Q8N3T1 639 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 TEX9Q8N6V9 391 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 ERP27Q96DN0 273 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 VCXQ9H320 206 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 ARL2BPQ9Y2Y0 163 aa14.15□□□□□ -0.14
GAPVD1-220ENST00000497580 MYMKA6NI61 221 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 FLOT1O75955 427 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 GH1P01241 217 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 CENPPQ6IPU0 288 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 BARGINQ6ZT62 677 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 SUPT20HQ8NEM7 779 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 ARHGEF2Q92974 986 aaKnown RBP14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 RAB3IPQ96QF0 476 aaPredicted RBP14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 ARHGEF3Q9NR81 526 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 LMCD1Q9NZU5 365 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 WTIPA6NIX2 430 aaPredicted RBP14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 TSPY2A6NKD2 308 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 ENTPD5O75356 428 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 SP100P23497 879 aaPredicted RBP14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 GCLCP48506 637 aaPredicted RBP14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 AADACL2Q6P093 401 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 SYCP3Q8IZU3 236 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 TGS1Q96RS0 853 aaKnown RBP14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 SLITRK6Q9H5Y7 841 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 RNPEPL1Q9HAU8 725 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 MAGEB6P1A0A0J9YX57 407 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 PPFIA2O75334 1257 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 NOL4O94818 638 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 PLCG2P16885 1265 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 GNAT2P19087 354 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 SERPINB4P48594 390 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 PPP2R5BQ15173 497 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 PFKFB3Q16875 520 aaPredicted RBP14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 C6orf118Q5T5N4 469 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 ZNF571Q7Z3V5 609 aaPredicted RBP14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 GBP7Q8N8V2 638 aaPredicted RBP14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 CCSER1Q9C0I3 900 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 TMOD4Q9NZQ9 345 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 CTNNAL1Q9UBT7 734 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 COL4A3BPQ9Y5P4 624 aa14.14□□□□□ -0.15
GAPVD1-220ENST00000497580 OR52Z1P0C646 297 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 CALM1P0DP23 149 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 CALM2P0DP24 149 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 CALM3P0DP25 149 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 SLC5A1P13866 664 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 ADGRA1Q86SQ6 560 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 PIGOQ8TEQ8 1089 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 VAT1LQ9HCJ6 419 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 BSDC1Q9NW68 430 aaPredicted RBP14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 AMFRQ9UKV5 643 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 INTUQ9ULD6 942 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 PCDHA4Q9UN74 947 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 USP17L12C9JPN9 530 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 USP17L21D6R901 530 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 DCAF17Q5H9S7 520 aaPredicted RBP14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 TPCN2Q8NHX9 752 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 ATP8B4Q8TF62 1192 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 ERVK-5Q9HDB9 667 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 OSGEPQ9NPF4 335 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 SCOCQ9UIL1 159 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 UBR1Q8IWV7 1749 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 AGTP01019 485 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 MYL1P05976 194 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 CALB2P22676 271 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 PTDSS1P48651 473 aaKnown RBP14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 PEX5P50542 639 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 RASIP1Q5U651 963 aa14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 TMX4Q9H1E5 349 aaPredicted RBP14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 BIN2Q9UBW5 565 aaPredicted RBP14.13□□□□□ -0.15
GAPVD1-220ENST00000497580 USH1CQ9Y6N9 552 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms