RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 TM4SF20Q53R12 229 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 MIIPQ5JXC2 388 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 LRSAM1Q6UWE0 723 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 MAMDC4Q6UXC1 1216 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 RNF207Q6ZRF8 634 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 USP30Q70CQ3 517 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 ASB15Q8WXK1 588 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 DLG3Q92796 817 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 ZNF503Q96F45 646 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 MAGEB10Q96LZ2 347 aaPredicted RBP5.41□□□□□ -1.54
CBX3-208ENST00000497498 MRIQ9BWK5 157 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 PLA2G12BQ9BX93 195 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 KIAA1683Q9H0B3 1180 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 PCED1AQ9H1Q7 454 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 OR10A5Q9H207 317 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 KCNH7Q9NS40 1196 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 UCKL1Q9NWZ5 548 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 SNTG2Q9NY99 539 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 NDOR1Q9UHB4 597 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 CDC42EP3Q9UKI2 254 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 COQ6Q9Y2Z9 468 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 B3GALT1Q9Y5Z6 326 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 A0A0G2JNJ9 132 aa5.4□□□□□ -1.54
CBX3-208ENST00000497498 PLSCR1O15162 318 aa5.4□□□□□ -1.54
CBX3-208ENST00000497498 SUV39H1O43463 412 aa5.4□□□□□ -1.54
CBX3-208ENST00000497498 MAFO75444 373 aaPredicted RBP5.4□□□□□ -1.54
CBX3-208ENST00000497498 RASGRP1O95267 797 aa5.4□□□□□ -1.54
CBX3-208ENST00000497498 ACO1P21399 889 aaKnown RBP5.4□□□□□ -1.54
CBX3-208ENST00000497498 SDHAP31040 664 aa5.4□□□□□ -1.54
CBX3-208ENST00000497498 RPS19P39019 145 aaKnown RBP5.4□□□□□ -1.54
CBX3-208ENST00000497498 PCOLCEQ15113 449 aa5.4□□□□□ -1.54
CBX3-208ENST00000497498 FSTL4Q6MZW2 842 aa5.4□□□□□ -1.54
CBX3-208ENST00000497498 OTOP2Q7RTS6 562 aa5.4□□□□□ -1.54
CBX3-208ENST00000497498 OVCH1Q7RTY7 1134 aa5.4□□□□□ -1.54
CBX3-208ENST00000497498 CISD2Q8N5K1 135 aaKnown RBP5.4□□□□□ -1.54
CBX3-208ENST00000497498 SCLYQ96I15 445 aa5.4□□□□□ -1.54
CBX3-208ENST00000497498 OR10A2Q9H208 303 aa5.4□□□□□ -1.54
CBX3-208ENST00000497498 Q9UFV3 132 aa5.4□□□□□ -1.54
CBX3-208ENST00000497498 ASB1Q9Y576 335 aa5.4□□□□□ -1.54
CBX3-208ENST00000497498 HS3ST3A1Q9Y663 406 aa5.4□□□□□ -1.54
CBX3-208ENST00000497498 CCDC163A0A0D9SF12 145 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 PMS2P1A4D2B8 440 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 RASSF10A6NK89 507 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 SCDO00767 359 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 FOXP2O15409 715 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 KCNA6P17658 529 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 MRE11P49959 708 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 HGFACQ04756 655 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 MOGSQ13724 837 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 USP39Q53GS9 565 aaKnown RBP5.39□□□□□ -1.55
CBX3-208ENST00000497498 WDR48Q8TAF3 677 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 EXTL1Q92935 676 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 MKL1Q969V6 931 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 FAM89AQ96GI7 184 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 GBP4Q96PP9 640 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 OR14A2Q96R54 314 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 DNAJC7Q99615 494 aa5.39□□□□□ -1.55
CBX3-208ENST00000497498 C12orf65Q9H3J6 166 aaKnown RBP5.39□□□□□ -1.55
CBX3-208ENST00000497498 PUF60Q9UHX1 559 aaKnown RBP5.39□□□□□ -1.55
CBX3-208ENST00000497498 TCRBV16S1A1N1A0A5B0 115 aa5.38□□□□□ -1.55
CBX3-208ENST00000497498 GOLGA6L22H0YM25 854 aa5.38□□□□□ -1.55
CBX3-208ENST00000497498 NPTXRO95502 500 aa5.38□□□□□ -1.55
CBX3-208ENST00000497498 APPP05067 770 aa5.38□□□□□ -1.55
CBX3-208ENST00000497498 NRN1LQ496H8 165 aa5.38□□□□□ -1.55
CBX3-208ENST00000497498 GRAMD4Q6IC98 578 aa5.38□□□□□ -1.55
CBX3-208ENST00000497498 FILIP1Q7Z7B0 1213 aa5.38□□□□□ -1.55
CBX3-208ENST00000497498 ZSWIM2Q8NEG5 633 aa5.38□□□□□ -1.55
CBX3-208ENST00000497498 MRPL4Q9BYD3 311 aaKnown RBP5.38□□□□□ -1.55
CBX3-208ENST00000497498 SFMBT1Q9UHJ3 866 aa5.38□□□□□ -1.55
CBX3-208ENST00000497498 SLC12A8A0AV02 714 aa5.37□□□□□ -1.55
CBX3-208ENST00000497498 PRAMEF22A3QJZ6 481 aa5.37□□□□□ -1.55
CBX3-208ENST00000497498 NPIPB8E9PQR5 432 aa5.37□□□□□ -1.55
CBX3-208ENST00000497498 MEOX1P50221 254 aa5.37□□□□□ -1.55
CBX3-208ENST00000497498 FOXL1Q12952 345 aa5.37□□□□□ -1.55
CBX3-208ENST00000497498 KLF10Q13118 480 aa5.37□□□□□ -1.55
CBX3-208ENST00000497498 CATSPEREQ5SY80 951 aa5.37□□□□□ -1.55
CBX3-208ENST00000497498 ABHD17CQ6PCB6 329 aa5.37□□□□□ -1.55
CBX3-208ENST00000497498 GPR135Q8IZ08 494 aa5.37□□□□□ -1.55
CBX3-208ENST00000497498 HIPK4Q8NE63 616 aa5.37□□□□□ -1.55
CBX3-208ENST00000497498 THAP3Q8WTV1 239 aaPredicted RBP5.37□□□□□ -1.55
CBX3-208ENST00000497498 ZNF341Q9BYN7 854 aa5.37□□□□□ -1.55
CBX3-208ENST00000497498 NELFAQ9H3P2 528 aa5.37□□□□□ -1.55
CBX3-208ENST00000497498 PLA2G3Q9NZ20 509 aa5.37□□□□□ -1.55
CBX3-208ENST00000497498 ZBTB48P10074 688 aaPredicted RBP5.36□□□□□ -1.55
CBX3-208ENST00000497498 TMEM177Q53S58 311 aa5.36□□□□□ -1.55
CBX3-208ENST00000497498 SOGA3Q5TF21 947 aa5.36□□□□□ -1.55
CBX3-208ENST00000497498 IGFL4Q6B9Z1 124 aa5.36□□□□□ -1.55
CBX3-208ENST00000497498 OTOP1Q7RTM1 612 aa5.36□□□□□ -1.55
CBX3-208ENST00000497498 BRAPQ7Z569 592 aa5.36□□□□□ -1.55
CBX3-208ENST00000497498 FGD2Q7Z6J4 655 aa5.36□□□□□ -1.55
CBX3-208ENST00000497498 RTKN2Q8IZC4 609 aa5.36□□□□□ -1.55
CBX3-208ENST00000497498 BCL6BQ8N143 479 aaPredicted RBP5.36□□□□□ -1.55
CBX3-208ENST00000497498 CALML6Q8TD86 181 aa5.36□□□□□ -1.55
CBX3-208ENST00000497498 FOXRED1Q96CU9 486 aaPredicted RBP5.36□□□□□ -1.55
CBX3-208ENST00000497498 SRPK1Q96SB4 655 aaKnown RBP5.36□□□□□ -1.55
CBX3-208ENST00000497498 TRIM39Q9HCM9 518 aa5.36□□□□□ -1.55
CBX3-208ENST00000497498 ING1Q9UK53 422 aaPredicted RBP5.36□□□□□ -1.55
CBX3-208ENST00000497498 SLC26A4O43511 780 aa5.35□□□□□ -1.55
CBX3-208ENST00000497498 ACRV1P26436 265 aa5.35□□□□□ -1.55
CBX3-208ENST00000497498 APEX1P27695 318 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms