RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 GAS7O60861 476 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 CA3P07451 260 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 LINC00271P0C7V0 271 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 UGCGQ16739 394 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 IER5Q5VY09 327 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 KRT40Q6A162 431 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 TSHZ1Q6ZSZ6 1077 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 ZNF710Q8N1W2 664 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 GJA10Q969M2 543 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 UIMC1Q96RL1 719 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 NAP1L4Q99733 375 aaKnown RBP12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 TEKT3Q9BXF9 490 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 IFIH1Q9BYX4 1025 aaKnown RBP12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 CELF4Q9BZC1 486 aaKnown RBP12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 SH2B1Q9NRF2 756 aaPredicted RBP12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 DDX25Q9UHL0 483 aaKnown RBP12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 TRPC6Q9Y210 931 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 CDY2AQ9Y6F7 541 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 BDP1A6H8Y1 2624 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 CCDC194A0A1B0GVG4 234 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 LCHNA4D1U4 455 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 FAM205CA6NFA0 338 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 KIF28PB7ZC32 967 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 EML1O00423 815 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 BACH1O14867 736 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 MAGEB2O15479 319 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 GPR32O75388 356 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 CTSHP09668 335 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 KRT2P35908 639 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 KCNJ6P48051 423 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 ERVK-21P61565 698 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 RABEP1Q15276 862 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 PIK3AP1Q6ZUJ8 805 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 FBXO18Q8NFZ0 1043 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 LINC01599Q8WXQ3 324 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 FAM167AQ96KS9 214 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 MTMR9Q96QG7 549 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 PRDM12Q9H4Q4 367 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 CEP131Q9UPN4 1083 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 INSL6Q9Y581 213 aa12.3□□□□□ -0.44
SHROOM3-210ENST00000497440 LOXHD1Q8IVV2 1947 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 WNT7AO00755 349 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 TLL1O43897 1013 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 OATP04181 439 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 GHRP10912 638 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 IGBP1P78318 339 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 FAM189BP81408 668 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 LETM2Q2VYF4 491 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 XKR3Q5GH77 459 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 PPP2R2DQ66LE6 453 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 SPRED2Q7Z698 418 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 TMCO2Q7Z6W1 182 aaPredicted RBP12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 DIS3L2Q8IYB7 885 aaKnown RBP12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 TMEM40Q8WWA1 233 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 ZNF689Q96CS4 500 aaPredicted RBP12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 TBC1D32Q96NH3 1257 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 HSD17B14Q9BPX1 270 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 FTHL17Q9BXU8 183 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 ADAMTS10Q9H324 1103 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 TMX1Q9H3N1 280 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 CDHR5Q9HBB8 845 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 NRBP2Q9NSY0 501 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 PADI3Q9ULW8 664 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 TRPV2Q9Y5S1 764 aa12.29□□□□□ -0.44
SHROOM3-210ENST00000497440 LINC01553A4QN01 128 aa12.28□□□□□ -0.44
SHROOM3-210ENST00000497440 EPOPA6NHQ4 379 aa12.28□□□□□ -0.44
SHROOM3-210ENST00000497440 AMHP03971 560 aa12.28□□□□□ -0.44
SHROOM3-210ENST00000497440 U2AF2P26368 475 aaKnown RBP eCLIP12.28□□□□□ -0.44
SHROOM3-210ENST00000497440 CRYBB1P53674 252 aaPredicted RBP12.28□□□□□ -0.44
SHROOM3-210ENST00000497440 HMGN5P82970 282 aaKnown RBP12.28□□□□□ -0.44
SHROOM3-210ENST00000497440 EPHA7Q15375 998 aa12.28□□□□□ -0.44
SHROOM3-210ENST00000497440 ANO5Q75V66 913 aa12.28□□□□□ -0.44
SHROOM3-210ENST00000497440 MAFAQ8NHW3 353 aaPredicted RBP12.28□□□□□ -0.44
SHROOM3-210ENST00000497440 FOXP1Q9H334 677 aaPredicted RBP12.28□□□□□ -0.44
SHROOM3-210ENST00000497440 ERVK-5Q9HDB9 667 aa12.28□□□□□ -0.44
SHROOM3-210ENST00000497440 LMCD1Q9NZU5 365 aa12.28□□□□□ -0.44
SHROOM3-210ENST00000497440 WRAP73Q9P2S5 460 aaPredicted RBP12.28□□□□□ -0.44
SHROOM3-210ENST00000497440 MYO7AQ13402 2215 aa12.27□□□□□ -0.44
SHROOM3-210ENST00000497440 CCNT1O60563 726 aaKnown RBP12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 MAFO75444 373 aaPredicted RBP12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 SLITRK3O94933 977 aa12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 LYPLA2O95372 231 aa12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 CD2BP2O95400 341 aaKnown RBP12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 P4HBP07237 508 aaKnown RBP12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 FOSL2P15408 326 aa12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 CD52P31358 61 aa12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 QARSP47897 775 aaKnown RBP12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 PSMC5P62195 406 aa12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 PRKCEQ02156 737 aa12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 ORC2Q13416 577 aaPredicted RBP12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 DSC3Q14574 896 aa12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 MIER3Q7Z3K6 550 aa12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 CCDC83Q8IWF9 413 aa12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 C4orf19Q8IY42 314 aa12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 SLFN12Q8IYM2 578 aa12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 CLP1Q92989 425 aaKnown RBP12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 FAM49AQ9H0Q0 323 aaPredicted RBP12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 SUGCTQ9HAC7 445 aa12.27□□□□□ -0.45
SHROOM3-210ENST00000497440 NOC2LQ9Y3T9 749 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms