RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 PHKG2P15735 406 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 PTENP60484 403 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 PPARDQ03181 441 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 DHX34Q14147 1143 aaKnown RBP14.09□□□□□ -0.15
VEGFA-215ENST00000497139 OR52E8Q6IFG1 317 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 NCAPG2Q86XI2 1143 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 NBPF15Q8N660 670 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 RBBP8NLQ8NC74 664 aaPredicted RBP14.09□□□□□ -0.15
VEGFA-215ENST00000497139 MIPOL1Q8TD10 442 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 FBXO41Q8TF61 875 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 MAIP1Q8WWC4 291 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 FGD4Q96M96 766 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 ZSCAN10Q96SZ4 725 aaPredicted RBP14.09□□□□□ -0.15
VEGFA-215ENST00000497139 RIC8AQ9NPQ8 531 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 PARP2Q9UGN5 583 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 PVALEFA0A1B0GWK0 134 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 POTEFA5A3E0 1075 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 PENKP01210 267 aaPredicted RBP14.08□□□□□ -0.15
VEGFA-215ENST00000497139 POTEIP0CG38 1075 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 POTEJP0CG39 1038 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 RANBP1P43487 201 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 GNAQP50148 359 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 PFKFB3Q16875 520 aaPredicted RBP14.08□□□□□ -0.15
VEGFA-215ENST00000497139 POTEEQ6S8J3 1075 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 FITM2Q8N6M3 262 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 KIAA0895Q8NCT3 520 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 KCNV2Q8TDN2 545 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 FAM136AQ96C01 138 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 ERP44Q9BS26 406 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 KLHL14Q9P2G3 628 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 LRCH1Q9Y2L9 728 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 AXIN2Q9Y2T1 843 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 CD2APQ9Y5K6 639 aa14.08□□□□□ -0.15
VEGFA-215ENST00000497139 KIF13BQ9NQT8 1826 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 A0A087X0T9 212 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 EYA4O95677 639 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 SHBGP04278 402 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 FAM228BP0C875 321 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 FLT1P17948 1338 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 ATP5DP30049 168 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 KLHL30Q0D2K2 578 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 KCNMA1Q12791 1236 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 TROAPQ12815 778 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 IFIT1BQ5T764 474 aaKnown RBP14.08□□□□□ -0.16
VEGFA-215ENST00000497139 ENAHQ8N8S7 591 aaPredicted RBP14.08□□□□□ -0.16
VEGFA-215ENST00000497139 DYDC1Q8WWB3 177 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 TSG101Q99816 390 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 TCP11L1Q9NUJ3 509 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.08□□□□□ -0.162e-7■■■□□ 15.9
VEGFA-215ENST00000497139 RASAL2Q9UJF2 1139 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 STXBP5LQ9Y2K9 1186 aa14.08□□□□□ -0.16
VEGFA-215ENST00000497139 NOL4O94818 638 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 KLRC3Q07444 240 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 ASIC2Q16515 512 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 SPDYAQ5MJ70 313 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 LRRC55Q6ZSA7 311 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 BLIDQ8IZY5 108 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 RPS6KC1Q96S38 1066 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 MTFR1LQ9H019 292 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 ZWILCHQ9H900 591 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 ARMT1Q9H993 441 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 LRRC4CQ9HCJ2 640 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 INTUQ9ULD6 942 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 SLC4A7Q9Y6M7 1214 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 FCER1AP12319 257 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 PLCG1P19174 1290 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 TUBP50607 506 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 ZRSR2Q15696 482 aaKnown RBP14.07□□□□□ -0.16
VEGFA-215ENST00000497139 CABP7Q86V35 215 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 RNF25Q96BH1 459 aaPredicted RBP14.07□□□□□ -0.16
VEGFA-215ENST00000497139 EEF2KMTQ96G04 330 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 DCAF5Q96JK2 942 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 RUNDC3BQ96NL0 473 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 TIPINQ9BVW5 301 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 DPH5Q9H2P9 285 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 ETNK1Q9HBU6 452 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 ATP8A2Q9NTI2 1148 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 FGFR1OP2Q9NVK5 253 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 NKX1-2Q9UD57 310 aaPredicted RBP14.07□□□□□ -0.16
VEGFA-215ENST00000497139 RGPD5Q99666 1765 aa14.07□□□□□ -0.16
VEGFA-215ENST00000497139 IFI35P80217 286 aaPredicted RBP14.06□□□□□ -0.16
VEGFA-215ENST00000497139 HHATQ5VTY9 493 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 LMOD2Q6P5Q4 547 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 PEX26Q7Z412 305 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 PROSER2Q86WR7 435 aaPredicted RBP14.06□□□□□ -0.16
VEGFA-215ENST00000497139 TPCN2Q8NHX9 752 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 MMTAG2Q9BU76 263 aaKnown RBP14.06□□□□□ -0.16
VEGFA-215ENST00000497139 ISCA1Q9BUE6 129 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.06□□□□□ -0.16
VEGFA-215ENST00000497139 VCX3BQ9H321 246 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 PIDD1Q9HB75 910 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 VCX3AQ9NNX9 186 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 NLRC4Q9NPP4 1024 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 USP40Q9NVE5 1235 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 PDP2Q9P2J9 529 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 DAAM1Q9Y4D1 1078 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 DUOX1Q9NRD9 1551 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 TCP11X1B4DZS4 312 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 NKRFO15226 690 aaKnown RBP eCLIP14.06□□□□□ -0.162e-6■□□□□ 8.4
VEGFA-215ENST00000497139 PYGBP11216 843 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms