RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CEP131Q9UPN4 1083 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 MAPK8IP1Q9UQF2 711 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 SSX2IPQ9Y2D8 614 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 SOS1Q07889 1333 aaPredicted RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 MYO1CO00159 1063 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 MUSKO15146 869 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 TBX1O43435 398 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 KDM1AO60341 852 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 CLASP2O75122 1294 aaKnown RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 TCEA3O75764 348 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 PAPLNO95428 1278 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 ZNF865P0CJ78 1059 aaPredicted RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 ATF7P17544 494 aaPredicted RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 KCNA6P17658 529 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 MCM5P33992 734 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 NF2P35240 595 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 ETFBP38117 255 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 MASP1P48740 699 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 HNRNPH2P55795 449 aaKnown RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 HDAC4P56524 1084 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 CTAG1AP78358 180 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 MPP3Q13368 585 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 TSHZ3Q63HK5 1081 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 CDCA2Q69YH5 1023 aaPredicted RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 INTS5Q6P9B9 1019 aaKnown RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 MAATS1Q7Z4T9 603 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 SLITRK4Q8IW52 837 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 GBP7Q8N8V2 638 aaPredicted RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 GIMAP7Q8NHV1 300 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 BICD2Q8TD16 824 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 TMEM40Q8WWA1 233 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 GPRASP2Q96D09 838 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 PGBD4Q96DM1 585 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 CCDC74BQ96LY2 380 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 SERINC2Q96SA4 455 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 SELENOOQ9BVL4 669 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 OSBPL10Q9BXB5 764 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 PRDM14Q9GZV8 571 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 VCX3BQ9H321 246 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 MRGBPQ9NV56 204 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 POGKQ9P215 609 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 ZNF69Q9UC07 566 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 GTF2IRD1Q9UHL9 959 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 ZNRF3Q9ULT6 936 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 NOSIPQ9Y314 301 aaKnown RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 SNX5Q9Y5X3 404 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 CGNL1Q0VF96 1302 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 CARMIL2Q6F5E8 1435 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 PRRT4C9JH25 899 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 NME1P15531 152 aaKnown RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 LTKP29376 864 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 HPDP32754 393 aaPredicted RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 USP8P40818 1118 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 NEK2P51955 445 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 EGR3Q06889 387 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 SMC1AQ14683 1233 aaKnown RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 SYCP1Q15431 976 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 ZNF124Q15973 351 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 ARMC4Q5T2S8 1044 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 MEX3CQ5U5Q3 659 aaKnown RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 MMS22LQ6ZRQ5 1243 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 BEND5Q7L4P6 421 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 TTC6Q86TZ1 520 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 TEX9Q8N6V9 391 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 LILRB1Q8NHL6 650 aaPredicted RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 BRSK1Q8TDC3 778 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 IPCEF1Q8WWN9 437 aaPredicted RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 LRRC45Q96CN5 670 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 VWCEQ96DN2 955 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 EPSTI1Q96J88 318 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 NT5C1AQ9BXI3 368 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 MMADHCQ9H3L0 296 aaPredicted RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 RXFP1Q9HBX9 757 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 C9orf78Q9NZ63 289 aaPredicted RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 ZIM2Q9NZV7 527 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 APEX2Q9UBZ4 518 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 PGAP2Q9UHJ9 254 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 GTF2A1LQ9UNN4 478 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 WDR37Q9Y2I8 494 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 ESYT3A0FGR9 886 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 A6NCN8 305 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 PRNPP04156 253 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 CYP1A2P05177 515 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 PYGLP06737 847 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 EPHX1P07099 455 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 IFNGR1P15260 489 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 RPL10P27635 214 aaKnown RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 KDRP35968 1356 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 RAB27AP51159 221 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 IRAK1P51617 712 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 DDX10Q13206 875 aaKnown RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 NMIQ13287 307 aaPredicted RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 WDR45BQ5MNZ6 344 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 FAM83BQ5T0W9 1011 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 FKBP15Q5T1M5 1219 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 ZNF648Q5T619 568 aaPredicted RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 NBPF12Q5TAG4 269 aaPredicted RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 MTHFD1LQ6UB35 978 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms