RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 IL9P15248 144 aa16.31■□□□□ 0.2
CXCL12-208ENST00000496375 KRT76Q01546 638 aa16.31■□□□□ 0.2
CXCL12-208ENST00000496375 RABEP1Q15276 862 aa16.31■□□□□ 0.2
CXCL12-208ENST00000496375 PKN1Q16512 942 aa16.31■□□□□ 0.2
CXCL12-208ENST00000496375 SWSAP1Q6NVH7 229 aa16.31■□□□□ 0.2
CXCL12-208ENST00000496375 MIS18BP1Q6P0N0 1132 aa16.31■□□□□ 0.2
CXCL12-208ENST00000496375 PDXDC2PQ6P474 469 aa16.31■□□□□ 0.2
CXCL12-208ENST00000496375 NPAS4Q8IUM7 802 aa16.31■□□□□ 0.2
CXCL12-208ENST00000496375 REXO1Q8N1G1 1221 aaKnown RBP16.31■□□□□ 0.2
CXCL12-208ENST00000496375 CCDC12Q8WUD4 166 aaPredicted RBP16.31■□□□□ 0.2
CXCL12-208ENST00000496375 PHKBQ93100 1093 aa16.31■□□□□ 0.2
CXCL12-208ENST00000496375 PABPC5Q96DU9 382 aaKnown RBP16.31■□□□□ 0.2
CXCL12-208ENST00000496375 ZNF577Q9BSK1 485 aa16.31■□□□□ 0.2
CXCL12-208ENST00000496375 COL1A2P08123 1366 aa16.3■□□□□ 0.2
CXCL12-208ENST00000496375 EVPLQ92817 2033 aa16.3■□□□□ 0.2
CXCL12-208ENST00000496375 MYH9P35579 1960 aaKnown RBP16.3■□□□□ 0.2
CXCL12-208ENST00000496375 ATP4AP20648 1035 aa16.3■□□□□ 0.2
CXCL12-208ENST00000496375 GNA11P29992 359 aa16.3■□□□□ 0.2
CXCL12-208ENST00000496375 SETQ01105 290 aaPredicted RBP16.3■□□□□ 0.2
CXCL12-208ENST00000496375 AKAP17AQ02040 695 aaKnown RBP16.3■□□□□ 0.2
CXCL12-208ENST00000496375 TMEM266Q2M3C6 531 aa16.3■□□□□ 0.2
CXCL12-208ENST00000496375 MCTP2Q6DN12 878 aa16.3■□□□□ 0.2
CXCL12-208ENST00000496375 FAM178BQ8IXR5 827 aa16.3■□□□□ 0.2
CXCL12-208ENST00000496375 CMTR2Q8IYT2 770 aaKnown RBP16.3■□□□□ 0.2
CXCL12-208ENST00000496375 CRIPAKQ8N1N5 446 aa16.3■□□□□ 0.2
CXCL12-208ENST00000496375 LMAN2LQ9H0V9 348 aa16.3■□□□□ 0.2
CXCL12-208ENST00000496375 TMX1Q9H3N1 280 aa16.3■□□□□ 0.2
CXCL12-208ENST00000496375 NCOA5Q9HCD5 579 aaKnown RBP16.3■□□□□ 0.2
CXCL12-208ENST00000496375 GINS2Q9Y248 185 aa16.3■□□□□ 0.2
CXCL12-208ENST00000496375 MRPL42Q9Y6G3 142 aaKnown RBP16.3■□□□□ 0.2
CXCL12-208ENST00000496375 KIAA1671Q9BY89 1806 aa16.3■□□□□ 0.2
CXCL12-208ENST00000496375 GRXCR2A6NFK2 248 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 PPFIA3O75145 1194 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 CSPG5O95196 566 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 STAG3L1P0CL83 205 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 IBSPP21815 317 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-208ENST00000496375 CCT2P78371 535 aaKnown RBP16.29■□□□□ 0.2
CXCL12-208ENST00000496375 SCRN1Q12765 414 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 NFX1Q12986 1120 aaKnown RBP16.29■□□□□ 0.2
CXCL12-208ENST00000496375 COL19A1Q14993 1142 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 PUS10Q3MIT2 529 aaKnown RBP16.29■□□□□ 0.2
CXCL12-208ENST00000496375 PAN2Q504Q3 1202 aaKnown RBP16.29■□□□□ 0.2
CXCL12-208ENST00000496375 PRR16Q569H4 304 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 ZNF484Q5JVG2 852 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 ZNF746Q6NUN9 644 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-208ENST00000496375 CKAP2LQ8IYA6 745 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 KIAA0319LQ8IZA0 1049 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 FAM177A1Q8N128 213 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-208ENST00000496375 GJD3Q8N144 294 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 RASGRP4Q8TDF6 673 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 PLVAPQ9BX97 442 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 CDHR5Q9HBB8 845 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 TBC1D22BQ9NU19 505 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 CLDND1Q9NY35 253 aa16.29■□□□□ 0.2
CXCL12-208ENST00000496375 STK36Q9NRP7 1315 aa16.28■□□□□ 0.2
CXCL12-208ENST00000496375 ZBTB42B2RXF5 422 aa16.28■□□□□ 0.2
CXCL12-208ENST00000496375 ME3Q16798 604 aa16.28■□□□□ 0.2
CXCL12-208ENST00000496375 BICD2Q8TD16 824 aa16.28■□□□□ 0.2
CXCL12-208ENST00000496375 GTF3C6Q969F1 213 aa16.28■□□□□ 0.2
CXCL12-208ENST00000496375 LARP6Q9BRS8 491 aaKnown RBP16.28■□□□□ 0.2
CXCL12-208ENST00000496375 LRFN3Q9BTN0 628 aa16.28■□□□□ 0.2
CXCL12-208ENST00000496375 SLC26A6Q9BXS9 759 aa16.28■□□□□ 0.2
CXCL12-208ENST00000496375 SLKQ9H2G2 1235 aaPredicted RBP16.28■□□□□ 0.2
CXCL12-208ENST00000496375 ERVK-5Q9HDB9 667 aa16.28■□□□□ 0.2
CXCL12-208ENST00000496375 ALG13Q9NP73 1137 aaKnown RBP16.28■□□□□ 0.2
CXCL12-208ENST00000496375 TCEAL9Q9UHQ7 104 aa16.28■□□□□ 0.2
CXCL12-208ENST00000496375 LRFN2Q9ULH4 789 aa16.28■□□□□ 0.2
CXCL12-208ENST00000496375 PLAGL2Q9UPG8 496 aa16.28■□□□□ 0.2
CXCL12-208ENST00000496375 NOC2LQ9Y3T9 749 aaKnown RBP16.28■□□□□ 0.2
CXCL12-208ENST00000496375 NCK2O43639 380 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 MGEA5O60502 916 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 RPS6KA5O75582 802 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 LARGE1O95461 756 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 MMP1P03956 469 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 SSTR3P32745 418 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-208ENST00000496375 CIITAP33076 1130 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 GATMP50440 423 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 HYAL1Q12794 435 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 TMEM31Q5JXX7 168 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 CPLX2Q6PUV4 134 aaKnown RBP16.27■□□□□ 0.2
CXCL12-208ENST00000496375 TRMT1LQ7Z2T5 733 aaKnown RBP16.27■□□□□ 0.2
CXCL12-208ENST00000496375 SMAP1Q8IYB5 467 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-208ENST00000496375 CCDC148Q8NFR7 591 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 TMEM40Q8WWA1 233 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 BBXQ8WY36 941 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-208ENST00000496375 P2RX5Q93086 422 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 PPP1R16BQ96T49 567 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 VPS54Q9P1Q0 977 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 LIMCH1Q9UPQ0 1083 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 PCDHA10Q9Y5I2 948 aa16.27■□□□□ 0.2
CXCL12-208ENST00000496375 MAFBQ9Y5Q3 323 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-208ENST00000496375 C5orf42Q9H799 3197 aa16.27■□□□□ 0.19
CXCL12-208ENST00000496375 WDR81Q562E7 1941 aa16.26■□□□□ 0.19
CXCL12-208ENST00000496375 PI4K2BG5E9Z4 385 aa16.26■□□□□ 0.19
CXCL12-208ENST00000496375 CPLX1O14810 134 aa16.26■□□□□ 0.19
CXCL12-208ENST00000496375 CDKL5O76039 1030 aa16.26■□□□□ 0.19
CXCL12-208ENST00000496375 C22orf31O95567 290 aa16.26■□□□□ 0.19
CXCL12-208ENST00000496375 PSAPP07602 524 aa16.26■□□□□ 0.19
CXCL12-208ENST00000496375 LTBRP36941 435 aa16.26■□□□□ 0.19
CXCL12-208ENST00000496375 SARSP49591 514 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms