RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	RAB30	Q15771	203 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	NCAPH2	Q6IBW4	605 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	GDF6	Q6KF10	455 aa	Predicted RBP	13.37	□□□□□ -0.27
APTX-233	ENST00000496030	IGSF22	Q8N9C0	903 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	KATNAL1	Q9BW62	490 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	PPP1R12C	Q9BZL4	782 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	AZI2	Q9H6S1	392 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	SLC28A3	Q9HAS3	691 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	TRMT13	Q9NUP7	481 aa	Known RBP	13.37	□□□□□ -0.27
APTX-233	ENST00000496030	RGL1	Q9NZL6	768 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	TFIP11	Q9UBB9	837 aa	Known RBP	13.37	□□□□□ -0.27
APTX-233	ENST00000496030	GTF2IRD1	Q9UHL9	959 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	SAMM50	Q9Y512	469 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	WDFY4	Q6ZS81	3184 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	KAT6A	Q92794	2004 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	B4GALT4	O60513	344 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	SPATA31C1	P0DKV0	1188 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	INSRR	P14616	1297 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	MYOG	P15173	224 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	NASP	P49321	788 aa	Predicted RBP	13.36	□□□□□ -0.27
APTX-233	ENST00000496030	SLC26A2	P50443	739 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	RABGGTB	P53611	331 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	PDIA5	Q14554	519 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	MARCH8	Q5T0T0	291 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	FAM160B1	Q5W0V3	765 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.36	□□□□□ -0.27
APTX-233	ENST00000496030	PDXDC2P	Q6P474	469 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	C7orf31	Q8N865	590 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	BANK1	Q8NDB2	785 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	ATP8B4	Q8TF62	1192 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	CHAMP1	Q96JM3	812 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.36	□□□□□ -0.27
APTX-233	ENST00000496030	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.36	□□□□□ -0.27
APTX-233	ENST00000496030	SETD4	Q9NVD3	440 aa		13.36	□□□□□ -0.27
APTX-233	ENST00000496030	ZNF215	Q9UL58	517 aa	Predicted RBP	13.36	□□□□□ -0.27
APTX-233	ENST00000496030	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.36	□□□□□ -0.27
APTX-233	ENST00000496030	BRWD1	Q9NSI6	2320 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	POTEB3	A0JP26	581 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	RFXAP	O00287	272 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	GPR37L1	O60883	481 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	P4HB	P07237	508 aa	Known RBP	13.35	□□□□□ -0.27
APTX-233	ENST00000496030	CYP2C18	P33260	490 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	GRIN1	Q05586	938 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	SLC39A14	Q15043	492 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	SKIV2L	Q15477	1246 aa	Known RBP	13.35	□□□□□ -0.27
APTX-233	ENST00000496030	AAK1	Q2M2I8	961 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	FAM47C	Q5HY64	1035 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.35	□□□□□ -0.27
APTX-233	ENST00000496030	POTEB	Q6S5H4	581 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	LMBR1	Q8WVP7	490 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	HERVK_113	Q902F9	699 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	DYDC2	Q96IM9	177 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	CEP89	Q96ST8	783 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	MMTAG2	Q9BU76	263 aa	Known RBP	13.35	□□□□□ -0.27
APTX-233	ENST00000496030	TCEAL9	Q9UHQ7	104 aa		13.35	□□□□□ -0.27
APTX-233	ENST00000496030	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.34	□□□□□ -0.27
APTX-233	ENST00000496030	PP2D1	A8MPX8	630 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	ZBTB39	O15060	712 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	TREH	O43280	583 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	TLL1	O43897	1013 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	MED24	O75448	989 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	LYPLA2	O95372	231 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	BMP15	O95972	392 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	CDC25A	P30304	524 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	QARS	P47897	775 aa	Known RBP	13.34	□□□□□ -0.27
APTX-233	ENST00000496030	PSMC5	P62195	406 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	PRKCE	Q02156	737 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	CEBPZ	Q03701	1054 aa	Known RBP	13.34	□□□□□ -0.27
APTX-233	ENST00000496030	DNM1	Q05193	864 aa	Known RBP	13.34	□□□□□ -0.27
APTX-233	ENST00000496030	PPFIA1	Q13136	1202 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	CTTN	Q14247	550 aa	Known RBP	13.34	□□□□□ -0.27
APTX-233	ENST00000496030	TARBP2	Q15633	366 aa	Known RBP	13.34	□□□□□ -0.27
APTX-233	ENST00000496030	GRIK4	Q16099	956 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	PTGIS	Q16647	500 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	TRIM71	Q2Q1W2	868 aa	Known RBP	13.34	□□□□□ -0.27
APTX-233	ENST00000496030	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.34	□□□□□ -0.27
APTX-233	ENST00000496030	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.34	□□□□□ -0.27
APTX-233	ENST00000496030	DTHD1	Q6ZMT9	781 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	ANO5	Q75V66	913 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	CATSPER3	Q86XQ3	398 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	TMEM199	Q8N511	208 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	LINC00301	Q8NCQ3	95 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	TRAPPC12	Q8WVT3	735 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	DHX38	Q92620	1227 aa	Known RBP	13.34	□□□□□ -0.27
APTX-233	ENST00000496030	WNT8B	Q93098	351 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	ZBTB10	Q96DT7	871 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	SNX27	Q96L92	541 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.34	□□□□□ -0.27
APTX-233	ENST00000496030	NIFK	Q9BYG3	293 aa	Known RBP	13.34	□□□□□ -0.27
APTX-233	ENST00000496030	IL23A	Q9NPF7	189 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	DAXX	Q9UER7	740 aa	Predicted RBP	13.34	□□□□□ -0.27
APTX-233	ENST00000496030	LRWD1	Q9UFC0	647 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	FBXO2	Q9UK22	296 aa	Predicted RBP	13.34	□□□□□ -0.27
APTX-233	ENST00000496030	MROH7	Q68CQ1	1323 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	NRCAM	Q92823	1304 aa		13.34	□□□□□ -0.27
APTX-233	ENST00000496030	TCHH	Q07283	1943 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	C17orf102	A2RUQ5	167 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	TMEM150B	A6NC51	233 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	VWA3A	A6NCI4	1184 aa		13.33	□□□□□ -0.28
APTX-233	ENST00000496030	HBP1	O60381	514 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms