RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 NPEPPSP55786 919 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 SIK1P57059 783 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 IFI16Q16666 785 aaKnown RBP16.72■□□□□ 0.27
SDF4-207ENST00000494748 SLC30A5Q8TAD4 765 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 EYA3Q99504 573 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 RAB34Q9BZG1 259 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 EMILIN3Q9NT22 766 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 TAF1LQ8IZX4 1826 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 PPP1R11O60927 126 aaPredicted RBP16.72■□□□□ 0.27
SDF4-207ENST00000494748 EIF3BP55884 814 aaKnown RBP16.72■□□□□ 0.27
SDF4-207ENST00000494748 PTENP60484 403 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 CRYMQ14894 314 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 SLC10A5Q5PT55 438 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 LNX1Q8TBB1 728 aaPredicted RBP16.72■□□□□ 0.27
SDF4-207ENST00000494748 SWAP70Q9UH65 585 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 IGSF9BQ9UPX0 1349 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 STRCQ7RTU9 1775 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 COL16A1Q07092 1604 aaPredicted RBP16.72■□□□□ 0.27
SDF4-207ENST00000494748 CTNND1O60716 968 aaKnown RBP16.71■□□□□ 0.27
SDF4-207ENST00000494748 GSTA1P08263 222 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 SLC8A1P32418 973 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 ADCY7P51828 1080 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 ITIH4Q14624 930 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 TNFAIP8L3Q5GJ75 292 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 CCDC197Q8NCU1 140 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 PGM2Q96G03 612 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 FMO2Q99518 471 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 CCDC134Q9H6E4 229 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 AGAP1Q9UPQ3 857 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 NBPF9Q3BBW0 867 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 MAPKAPK5Q8IW41 473 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 BANK1Q8NDB2 785 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 CCDC26Q8TAB7 109 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 CUL5Q93034 780 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 OSGEPQ9NPF4 335 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 PPATQ06203 517 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 INTUQ9ULD6 942 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 PPP1R9AQ9ULJ8 1098 aa16.71■□□□□ 0.27
SDF4-207ENST00000494748 NCANO14594 1321 aa16.71■□□□□ 0.26
SDF4-207ENST00000494748 AFF2P51816 1311 aa16.71■□□□□ 0.26
SDF4-207ENST00000494748 RPTORQ8N122 1335 aa16.71■□□□□ 0.26
SDF4-207ENST00000494748 ZNF831Q5JPB2 1677 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 hCG_1984214I3L0E3 225 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 FGGP02679 453 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 ANXA13P27216 316 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 COPB2P35606 906 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 RPS8P62241 208 aaKnown RBP16.7■□□□□ 0.26
SDF4-207ENST00000494748 RIPK1Q13546 671 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 UBE2SQ16763 222 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 GJB7Q6PEY0 223 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 EPM2AIP1Q7L775 607 aaPredicted RBP16.7■□□□□ 0.26
SDF4-207ENST00000494748 FRMD5Q7Z6J6 570 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 LRRC34Q8IZ02 419 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 ZNF713Q8N859 430 aaPredicted RBP16.7■□□□□ 0.26
SDF4-207ENST00000494748 SYT11Q9BT88 431 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 TRAF3IP3Q9Y228 551 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 UTP11Q9Y3A2 253 aaKnown RBP16.7■□□□□ 0.26
SDF4-207ENST00000494748 OAS1P00973 400 aaKnown RBP16.7■□□□□ 0.26
SDF4-207ENST00000494748 MMEP08473 750 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 PLA2G4BP0C869 781 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 EZRP15311 586 aaKnown RBP16.7■□□□□ 0.26
SDF4-207ENST00000494748 PAX7P23759 505 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 NR2F2P24468 414 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 SLC12A3P55017 1021 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 IFI35P80217 286 aaPredicted RBP16.7■□□□□ 0.26
SDF4-207ENST00000494748 HIBCHQ6NVY1 386 aaPredicted RBP16.7■□□□□ 0.26
SDF4-207ENST00000494748 PPP4R3CPQ6ZMV5 832 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 DAAM2Q86T65 1068 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 TEX11Q8IYF3 940 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 RTFDC1Q9BY42 306 aaPredicted RBP16.7■□□□□ 0.26
SDF4-207ENST00000494748 FRMPD2Q68DX3 1309 aaPredicted RBP16.7■□□□□ 0.26
SDF4-207ENST00000494748 BUB1BO60566 1050 aaPredicted RBP16.7■□□□□ 0.26
SDF4-207ENST00000494748 CLEC4GQ6UXB4 293 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 STAMBPL1Q96FJ0 436 aa16.7■□□□□ 0.26
SDF4-207ENST00000494748 PABPC3Q9H361 631 aaKnown RBP16.7■□□□□ 0.26
SDF4-207ENST00000494748 DDX25Q9UHL0 483 aaKnown RBP16.7■□□□□ 0.26
SDF4-207ENST00000494748 POTEB3A0JP26 581 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 POTECB2RU33 542 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 ECM2O94769 699 aaPredicted RBP16.69■□□□□ 0.26
SDF4-207ENST00000494748 AFPP02771 609 aaKnown RBP16.69■□□□□ 0.26
SDF4-207ENST00000494748 ALADP13716 330 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 POTEBQ6S5H4 581 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 CRELD2Q6UXH1 353 aaPredicted RBP16.69■□□□□ 0.26
SDF4-207ENST00000494748 CCDC65Q8IXS2 484 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 MAB21L3Q8N8X9 362 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 TRIM31Q9BZY9 425 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 GRHL1Q9NZI5 618 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 KIAA1024Q9UPX6 916 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 FLOT1O75955 427 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 H2AFZP0C0S5 128 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 GALCP54803 685 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 HERC4Q5GLZ8 1057 aaPredicted RBP16.69■□□□□ 0.26
SDF4-207ENST00000494748 SPTY2D1Q68D10 685 aaPredicted RBP16.69■□□□□ 0.26
SDF4-207ENST00000494748 H2AFVQ71UI9 128 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 GPBP1Q86WP2 473 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 KIRREL3Q8IZU9 778 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 L3MBTL3Q96JM7 780 aaPredicted RBP16.69■□□□□ 0.26
SDF4-207ENST00000494748 ERP44Q9BS26 406 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 PCDHA3Q9Y5H8 950 aa16.69■□□□□ 0.26
SDF4-207ENST00000494748 PPP1R12BO60237 982 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms