RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 PER2O15055 1255 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 HBP1O60381 514 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 SP100P23497 879 aaPredicted RBP10.95□□□□□ -0.66
UBR4-216ENST00000494503 SARSP49591 514 aaKnown RBP10.95□□□□□ -0.66
UBR4-216ENST00000494503 KIZQ2M2Z5 673 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 CTC1Q2NKJ3 1217 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 ODR4Q5SWX8 454 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 TYW1BQ6NUM6 668 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 SWSAP1Q6NVH7 229 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 ZBTB33Q86T24 672 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 NME8Q8N427 588 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 RNF169Q8NCN4 708 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 SPPL3Q8TCT6 385 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 RPGRIP1Q96KN7 1286 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 MFSD14AQ96MC6 490 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 OSMRQ99650 979 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 ADAM2Q99965 735 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 ZNF577Q9BSK1 485 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 APOL5Q9BWW9 433 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 AKT3Q9Y243 479 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 SQORQ9Y6N5 450 aa10.95□□□□□ -0.66
UBR4-216ENST00000494503 C19orf67A6NJJ6 358 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 GPR182O15218 404 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 VTNP04004 478 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 MRE11P49959 708 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 SLC26A2P50443 739 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 AP3B2Q13367 1082 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 ADAM15Q13444 863 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 COL19A1Q14993 1142 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 NECTIN1Q15223 517 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 NAALADL2Q58DX5 795 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 FAM102BQ5T8I3 360 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 PLPP4Q5VZY2 271 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 LLGL2Q6P1M3 1020 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 SGMS1Q86VZ5 419 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 CCDC60Q8IWA6 550 aaPredicted RBP10.94□□□□□ -0.66
UBR4-216ENST00000494503 SUGP1Q8IWZ8 645 aaKnown RBP10.94□□□□□ -0.66
UBR4-216ENST00000494503 ABI1Q8IZP0 508 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 EFHBQ8N7U6 833 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 ATP8B4Q8TF62 1192 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 FBXL18Q96ME1 805 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 GLT8D2Q9H1C3 349 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 TMX1Q9H3N1 280 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 ATP6V0A4Q9HBG4 840 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 ENTPD7Q9NQZ7 604 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 TLR9Q9NR96 1032 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 RNF216Q9NWF9 866 aaPredicted RBP10.94□□□□□ -0.66
UBR4-216ENST00000494503 HCSTQ9UBK5 93 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 ST3GAL5Q9UNP4 418 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 NOC2LQ9Y3T9 749 aaKnown RBP10.94□□□□□ -0.66
UBR4-216ENST00000494503 TECTAO75443 2155 aa10.94□□□□□ -0.66
UBR4-216ENST00000494503 ZNF318Q5VUA4 2279 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 ZDBF2Q9HCK1 2354 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 hCG_1984214I3L0E3 225 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 IPO5O00410 1097 aaKnown RBP10.93□□□□□ -0.66
UBR4-216ENST00000494503 MGEA5O60502 916 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 FGF18O76093 207 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 CCNE2O96020 404 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 SRGAP2BP0DMP2 458 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 FGFR1P11362 822 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 SREBF1P36956 1147 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 METAP2P50579 478 aaKnown RBP eCLIP10.93□□□□□ -0.66
UBR4-216ENST00000494503 RBM10P98175 930 aaKnown RBP10.93□□□□□ -0.66
UBR4-216ENST00000494503 AKAP17AQ02040 695 aaKnown RBP10.93□□□□□ -0.66
UBR4-216ENST00000494503 NHLH1Q02575 133 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 APOBRQ0VD83 1088 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 CAMK1Q14012 370 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 ZNF484Q5JVG2 852 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 SLC24A5Q71RS6 500 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 ZNF713Q8N859 430 aaPredicted RBP10.93□□□□□ -0.66
UBR4-216ENST00000494503 TMEM40Q8WWA1 233 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 PBXIP1Q96AQ6 731 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 ZNF668Q96K58 619 aaPredicted RBP10.93□□□□□ -0.66
UBR4-216ENST00000494503 MAP7D2Q96T17 732 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 CDHR5Q9HBB8 845 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 ERVK-5Q9HDB9 667 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 TSHZ2Q9NRE2 1034 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 C1orf112Q9NSG2 853 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 BARHL2Q9NY43 387 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 BRPF3Q9ULD4 1205 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 USP15Q9Y4E8 981 aaPredicted RBP10.93□□□□□ -0.66
UBR4-216ENST00000494503 WDFY4Q6ZS81 3184 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 TRIOO75962 3097 aa10.93□□□□□ -0.66
UBR4-216ENST00000494503 COL1A2P08123 1366 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 WDR81Q562E7 1941 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 KDM3AQ9Y4C1 1321 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 FAM86B1E9PN63 330 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 MEIS1O00470 390 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 CHMP2AO43633 222 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 PSAPP07602 524 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 FAM86B2P0C5J1 330 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 ZSCAN20P17040 1043 aaPredicted RBP10.92□□□□□ -0.66
UBR4-216ENST00000494503 CLCN3P51790 818 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 PRR16Q569H4 304 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 HERC4Q5GLZ8 1057 aaPredicted RBP10.92□□□□□ -0.66
UBR4-216ENST00000494503 ABHD15Q6UXT9 468 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 DHX32Q7L7V1 743 aaKnown RBP10.92□□□□□ -0.66
UBR4-216ENST00000494503 SKAP1Q86WV1 359 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 KIAA0319LQ8IZA0 1049 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 REXO1Q8N1G1 1221 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms