RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 MYCT1Q8N699 235 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 LRRN4CLQ8ND94 238 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 CHST13Q8NET6 341 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 CLMNQ96JQ2 1002 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 SENP7Q9BQF6 1050 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 STRA6Q9BX79 667 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 IKZF4Q9H2S9 585 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 ELP3Q9H9T3 547 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 FAM207AQ9NSI2 230 aaPredicted RBP11.73□□□□□ -0.53
CLCN6-208ENST00000494028 BTBD7Q9P203 1132 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 TCEAL9Q9UHQ7 104 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 ZNF215Q9UL58 517 aaPredicted RBP11.73□□□□□ -0.53
CLCN6-208ENST00000494028 FAM184BQ9ULE4 1060 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 IGSF9BQ9UPX0 1349 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.73□□□□□ -0.53
CLCN6-208ENST00000494028 ZC3H4Q9UPT8 1303 aaKnown RBP11.72□□□□□ -0.53
CLCN6-208ENST00000494028 TMEM150BA6NC51 233 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 LRRC53A6NM62 1247 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 SFI1A8K8P3 1242 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 K7ENM7 598 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 IRF6O14896 467 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 PPP1R12BO60237 982 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-208ENST00000494028 AKAP3O75969 853 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 NOL4O94818 638 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 SLU7O95391 586 aaKnown RBP11.72□□□□□ -0.53
CLCN6-208ENST00000494028 EPHX2P34913 555 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 CASP4P49662 377 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 GNG11P61952 73 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 PSMC5P62195 406 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 PPP2R3AQ06190 1150 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 ADAM9Q13443 819 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 PLS1Q14651 629 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 ZC2HC1CQ53FD0 456 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-208ENST00000494028 PLA2G4FQ68DD2 849 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 GADL1Q6ZQY3 521 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 STXBP4Q6ZWJ1 553 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 FRMD5Q7Z6J6 570 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 FAM178BQ8IXR5 827 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 PROCA1Q8NCQ7 364 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-208ENST00000494028 NEK11Q8NG66 645 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 NSUN6Q8TEA1 469 aaKnown RBP11.72□□□□□ -0.53
CLCN6-208ENST00000494028 ANKRD7Q92527 254 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 OTUD5Q96G74 571 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 ERO1AQ96HE7 468 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 EDEM3Q9BZQ6 932 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 MMRN2Q9H8L6 949 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 LZTFL1Q9NQ48 299 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 AGPAT3Q9NRZ7 376 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 CEP72Q9P209 647 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 KCNH4Q9UQ05 1017 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 SAMM50Q9Y512 469 aa11.72□□□□□ -0.53
CLCN6-208ENST00000494028 EPN1Q9Y6I3 576 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-208ENST00000494028 PFASO15067 1338 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 EIF3CLB5ME19 914 aaKnown RBP11.71□□□□□ -0.53
CLCN6-208ENST00000494028 PEX10O60683 326 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 CNMDO75829 334 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 STAM2O75886 525 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 MAPTP10636 758 aaKnown RBP11.71□□□□□ -0.53
CLCN6-208ENST00000494028 EPB41P11171 864 aaKnown RBP11.71□□□□□ -0.53
CLCN6-208ENST00000494028 CASQ1P31415 396 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 YWHABP31946 246 aaKnown RBP11.71□□□□□ -0.53
CLCN6-208ENST00000494028 CYLC1P35663 651 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-208ENST00000494028 ALDH5A1P51649 535 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-208ENST00000494028 PPATQ06203 517 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 PPIL2Q13356 520 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 ALCAMQ13740 583 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 ODR4Q5SWX8 454 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 DPY19L2P1Q6NXN4 242 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 USP50Q70EL3 339 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-208ENST00000494028 MOB2Q70IA6 237 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 ZNF720Q7Z2F6 126 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 ERO1BQ86YB8 467 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 RIOX2Q8IUF8 465 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 KSR1Q8IVT5 923 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 EIF3CQ99613 913 aaKnown RBP11.71□□□□□ -0.53
CLCN6-208ENST00000494028 MKNK1Q9BUB5 465 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 TIPINQ9BVW5 301 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 IRX2Q9BZI1 471 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-208ENST00000494028 ANKEF1Q9NU02 776 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 ZNHIT6Q9NWK9 470 aaKnown RBP11.71□□□□□ -0.53
CLCN6-208ENST00000494028 HOXC10Q9NYD6 342 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 ARHGAP20Q9P2F6 1191 aa11.71□□□□□ -0.53
CLCN6-208ENST00000494028 ARMCX3Q9UH62 379 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-208ENST00000494028 ZNF236Q9UL36 1845 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 CLIC2O15247 247 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 KIF5CO60282 957 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 ZNF862O60290 1169 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 STBD1O95210 358 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 AFPP02771 609 aaKnown RBP11.7□□□□□ -0.54
CLCN6-208ENST00000494028 PLEKP08567 350 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-208ENST00000494028 PLS3P13797 630 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 EDNRBP24530 442 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 RPL13P26373 211 aaKnown RBP11.7□□□□□ -0.54
CLCN6-208ENST00000494028 NF2P35240 595 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 NCKAP1LP55160 1127 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 KCNH2Q12809 1159 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 MOGSQ13724 837 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
CLCN6-208ENST00000494028 ARHGAP29Q52LW3 1261 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 DCAF17Q5H9S7 520 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms