RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 RBM23Q86U06 439 aaKnown RBP12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 MYL10Q9BUA6 226 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 TMX1Q9H3N1 280 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 ERVK-5Q9HDB9 667 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 NGRNQ9NPE2 291 aaKnown RBP12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 TMEM161AQ9NX61 479 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 PKD2L1Q9P0L9 805 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 SLC12A7Q9Y666 1083 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 IGKV6D-21A0A0A0MT36 114 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 hCG_1984214I3L0E3 225 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 KLRC1P26715 233 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 PPM1AP35813 382 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 TMEM62Q0P6H9 643 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 UBE2SQ16763 222 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 PTPN21Q16825 1174 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 ZNF484Q5JVG2 852 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 IER5LQ5T953 404 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 TMTC3Q6ZXV5 915 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 NIPA1Q7RTP0 329 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 THNSL1Q8IYQ7 743 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 ZNF713Q8N859 430 aaPredicted RBP12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 RPGRIP1Q96KN7 1286 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 SNX27Q96L92 541 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 ATP6V0A4Q9HBG4 840 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 RBM8AQ9Y5S9 174 aaKnown RBP12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 TAF6LQ9Y6J9 622 aa12.54□□□□□ -0.4
SNRNP200-207ENST00000493271 TBKBP1A7MCY6 615 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 C9IYK1 514 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 FSCN2O14926 492 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 CRYBB1P53674 252 aaPredicted RBP12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 TCF15Q12870 199 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 AP3B2Q13367 1082 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 KCNC3Q14003 757 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 SYNE3Q6ZMZ3 975 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 HEATR3Q7Z4Q2 680 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 FANCBQ8NB91 859 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 COLGALT1Q8NBJ5 622 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 RSPH1Q8WYR4 309 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 MRPS27Q92552 414 aaKnown RBP12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 ASIC4Q96FT7 647 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 NECTIN4Q96NY8 510 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 ADAM2Q99965 735 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 AGO4Q9HCK5 861 aaKnown RBP12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 RIC8AQ9NPQ8 531 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 RBM28Q9NW13 759 aaKnown RBP12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 TMEM260Q9NX78 707 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 ST3GAL5Q9UNP4 418 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 CEP131Q9UPN4 1083 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 NR2E1Q9Y466 385 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 PLXNA4Q9HCM2 1894 aa12.53□□□□□ -0.4
SNRNP200-207ENST00000493271 USP34Q70CQ2 3546 aa12.52□□□□□ -0.4
SNRNP200-207ENST00000493271 CARNS1A5YM72 827 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 MEIS1O00470 390 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 BACH1O14867 736 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 PPFIA3O75145 1194 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 AVPR2P30518 371 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 GATMP50440 423 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 FAM189BP81408 668 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 KRT17Q04695 432 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 TMEM266Q2M3C6 531 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 MCTP2Q6DN12 878 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 ANKRD54Q6NXT1 300 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 MIS18BP1Q6P0N0 1132 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 SGMS1Q86VZ5 419 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 UBALD2Q8IYN6 164 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 KIAA0319LQ8IZA0 1049 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 TRAPPC12Q8WVT3 735 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 CASP10Q92851 521 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 ZBTB10Q96DT7 871 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 TMEM117Q9H0C3 514 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 TYW1Q9NV66 732 aaKnown RBP12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 GINS2Q9Y248 185 aa12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 NOC2LQ9Y3T9 749 aaKnown RBP12.52□□□□□ -0.41
SNRNP200-207ENST00000493271 KMT2EQ8IZD2 1858 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 PER2O15055 1255 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 MGEA5O60502 916 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 GFRA3O60609 400 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 PDE4AP27815 886 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 SREBF1P36956 1147 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 NAPAP54920 295 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 ERVFC1P60507 584 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 FOXK2Q01167 660 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 ITIH3Q06033 890 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 ITGB3BPQ13352 177 aaPredicted RBP12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 BMS1Q14692 1282 aaKnown RBP12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 TPRNQ4KMQ1 711 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 FAM102BQ5T8I3 360 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 ABHD15Q6UXT9 468 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 ZBTB33Q86T24 672 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 CMTR1Q8N1G2 835 aaKnown RBP12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 LRRC43Q8N309 656 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 EXOC6Q8TAG9 804 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 BBXQ8WY36 941 aaPredicted RBP12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 TCF25Q9BQ70 676 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 ANO3Q9BYT9 981 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 S1PR5Q9H228 398 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 ZNF302Q9NR11 478 aa12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 FNDC1Q4ZHG4 1894 aaPredicted RBP12.51□□□□□ -0.41
SNRNP200-207ENST00000493271 PROB1E7EW31 1015 aa12.5□□□□□ -0.41
SNRNP200-207ENST00000493271 MAGEB2O15479 319 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms