RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 NDUFA8P51970 172 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 UBE2HP62256 183 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 IGBP1P78318 339 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 TMEM119Q4V9L6 283 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 FAM47CQ5HY64 1035 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 CCDC73Q6ZRK6 1079 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 KCNK18Q7Z418 384 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 C4orf19Q8IY42 314 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 DHX58Q96C10 678 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 GLT1D1Q96MS3 346 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 NACC1Q96RE7 527 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 KATNAL1Q9BW62 490 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 NT5C3AQ9H0P0 336 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 NRBP2Q9NSY0 501 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 LMBRD1Q9NUN5 540 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 MTMR10Q9NXD2 777 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 WDR81Q562E7 1941 aa19.19■□□□□ 0.66
LIME1-208ENST00000493265 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.19■□□□□ 0.66
LIME1-208ENST00000493265 SLC26A2P50443 739 aa19.19■□□□□ 0.66
LIME1-208ENST00000493265 ATN1P54259 1190 aaPredicted RBP19.19■□□□□ 0.66
LIME1-208ENST00000493265 NBPF20Q3BBV1 942 aa19.19■□□□□ 0.66
LIME1-208ENST00000493265 MTERF2Q49AM1 385 aa19.19■□□□□ 0.66
LIME1-208ENST00000493265 XKR9Q5GH70 373 aa19.19■□□□□ 0.66
LIME1-208ENST00000493265 XKR3Q5GH77 459 aa19.19■□□□□ 0.66
LIME1-208ENST00000493265 ATP8B4Q8TF62 1192 aa19.19■□□□□ 0.66
LIME1-208ENST00000493265 TRAPPC12Q8WVT3 735 aa19.19■□□□□ 0.66
LIME1-208ENST00000493265 FAM167AQ96KS9 214 aa19.19■□□□□ 0.66
LIME1-208ENST00000493265 PHF24Q9UPV7 400 aa19.19■□□□□ 0.66
LIME1-208ENST00000493265 DNM3Q9UQ16 869 aa19.19■□□□□ 0.66
LIME1-208ENST00000493265 STXBP5LQ9Y2K9 1186 aa19.19■□□□□ 0.66
LIME1-208ENST00000493265 MYH9P35579 1960 aaKnown RBP19.19■□□□□ 0.66
LIME1-208ENST00000493265 LTBP2Q14767 1821 aa19.18■□□□□ 0.66
LIME1-208ENST00000493265 CABYRO75952 493 aa19.18■□□□□ 0.66
LIME1-208ENST00000493265 STBD1O95210 358 aa19.18■□□□□ 0.66
LIME1-208ENST00000493265 SMIM10L2AP0DMW4 78 aa19.18■□□□□ 0.66
LIME1-208ENST00000493265 SMIM10L2BP0DMW5 78 aa19.18■□□□□ 0.66
LIME1-208ENST00000493265 LIG1P18858 919 aa19.18■□□□□ 0.66
LIME1-208ENST00000493265 SYKP43405 635 aa19.18■□□□□ 0.66
LIME1-208ENST00000493265 NPEPPSP55786 919 aa19.18■□□□□ 0.66
LIME1-208ENST00000493265 HYIQ5T013 277 aa19.18■□□□□ 0.66
LIME1-208ENST00000493265 ANO5Q75V66 913 aa19.18■□□□□ 0.66
LIME1-208ENST00000493265 OTUD6AQ7L8S5 288 aa19.18■□□□□ 0.66
LIME1-208ENST00000493265 C7orf31Q8N865 590 aa19.18■□□□□ 0.66
LIME1-208ENST00000493265 LRRC15Q8TF66 581 aa19.18■□□□□ 0.66
LIME1-208ENST00000493265 BBXQ8WY36 941 aaPredicted RBP19.18■□□□□ 0.66
LIME1-208ENST00000493265 STARD7Q9NQZ5 370 aa19.18■□□□□ 0.66
LIME1-208ENST00000493265 BMP2KQ9NSY1 1161 aaPredicted RBP19.18■□□□□ 0.66
LIME1-208ENST00000493265 A0A0C4DFX4 3053 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 ARHGEF35A5YM69 484 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 HAS3O00219 553 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 SLC26A4O43511 780 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 LYPLA2O95372 231 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 INSRRP14616 1297 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 MUTP22033 750 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 PPFIA1Q13136 1202 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 ITGA7Q13683 1181 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 MCM6Q14566 821 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 CEP170P1Q96L14 293 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 LBHD1Q9BQE6 289 aaPredicted RBP19.17■□□□□ 0.66
LIME1-208ENST00000493265 BHMT2Q9H2M3 363 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 SETD4Q9NVD3 440 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 HDAC6Q9UBN7 1215 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 SERTAD1Q9UHV2 236 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 HPSEQ9Y251 543 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 CUL9Q8IWT3 2517 aa19.17■□□□□ 0.66
LIME1-208ENST00000493265 HBP1O60381 514 aa19.16■□□□□ 0.66
LIME1-208ENST00000493265 EYA4O95677 639 aa19.16■□□□□ 0.66
LIME1-208ENST00000493265 PLA2G4BP0C869 781 aa19.16■□□□□ 0.66
LIME1-208ENST00000493265 GRIK4Q16099 956 aa19.16■□□□□ 0.66
LIME1-208ENST00000493265 IQUBQ8NA54 791 aa19.16■□□□□ 0.66
LIME1-208ENST00000493265 RAD54LQ92698 747 aa19.16■□□□□ 0.66
LIME1-208ENST00000493265 STAMQ92783 540 aa19.16■□□□□ 0.66
LIME1-208ENST00000493265 ZBTB10Q96DT7 871 aa19.16■□□□□ 0.66
LIME1-208ENST00000493265 ANKEF1Q9NU02 776 aa19.16■□□□□ 0.66
LIME1-208ENST00000493265 ZNF202O95125 648 aa19.15■□□□□ 0.66
LIME1-208ENST00000493265 RTP1P59025 263 aa19.15■□□□□ 0.66
LIME1-208ENST00000493265 FAM160A1Q05DH4 1040 aa19.15■□□□□ 0.66
LIME1-208ENST00000493265 NAALADL2Q58DX5 795 aa19.15■□□□□ 0.66
LIME1-208ENST00000493265 CEP57L1Q8IYX8 460 aa19.15■□□□□ 0.66
LIME1-208ENST00000493265 LARP4BQ92615 738 aaKnown RBP19.15■□□□□ 0.66
LIME1-208ENST00000493265 NIFKQ9BYG3 293 aaKnown RBP19.15■□□□□ 0.66
LIME1-208ENST00000493265 CYP26B1Q9NR63 512 aa19.15■□□□□ 0.66
LIME1-208ENST00000493265 BLOC1S4Q9NUP1 217 aa19.15■□□□□ 0.66
LIME1-208ENST00000493265 STK17AQ9UEE5 414 aa19.15■□□□□ 0.66
LIME1-208ENST00000493265 DBR1Q9UK59 544 aaKnown RBP19.15■□□□□ 0.66
LIME1-208ENST00000493265 GRIN2DO15399 1336 aa19.15■□□□□ 0.66
LIME1-208ENST00000493265 A0A0U1RQG5 324 aaPredicted RBP19.14■□□□□ 0.65
LIME1-208ENST00000493265 FAM237AA0A1B0GTK4 181 aa19.14■□□□□ 0.65
LIME1-208ENST00000493265 C17orf102A2RUQ5 167 aa19.14■□□□□ 0.65
LIME1-208ENST00000493265 USO1O60763 962 aaKnown RBP19.14■□□□□ 0.65
LIME1-208ENST00000493265 NR1I2O75469 434 aa19.14■□□□□ 0.65
LIME1-208ENST00000493265 RARRES1P49788 294 aa19.14■□□□□ 0.65
LIME1-208ENST00000493265 ZNF200P98182 395 aaPredicted RBP19.14■□□□□ 0.65
LIME1-208ENST00000493265 RAD51AP2Q09MP3 1159 aa19.14■□□□□ 0.65
LIME1-208ENST00000493265 E2F4Q16254 413 aa19.14■□□□□ 0.65
LIME1-208ENST00000493265 LONRF3Q496Y0 759 aa19.14■□□□□ 0.65
LIME1-208ENST00000493265 ZNF484Q5JVG2 852 aa19.14■□□□□ 0.65
LIME1-208ENST00000493265 MAEAQ7L5Y9 396 aa19.14■□□□□ 0.65
LIME1-208ENST00000493265 FMR1NBQ8N0W7 255 aaPredicted RBP19.14■□□□□ 0.65
LIME1-208ENST00000493265 FAM161BQ96MY7 647 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms