RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 USP17L4A6NCW7 530 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 SLC37A4O43826 429 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 SNX3O60493 162 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 FLOT1O75955 427 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 USP17L8P0C7I0 530 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 ACTN1P12814 892 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 KCNH2Q12809 1159 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 PDIA5Q14554 519 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 TNFAIP8L3Q5GJ75 292 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 DENND2CQ68D51 928 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 USP17L1Q7RTZ2 530 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 FAM84BQ96KN1 310 aaPredicted RBP16.09■□□□□ 0.17
PABPC4-216ENST00000492468 ERP44Q9BS26 406 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 KCTD10Q9H3F6 313 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 MCM9Q9NXL9 1143 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 PCDHA2Q9Y5H9 948 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 BCL9O00512 1426 aa16.09■□□□□ 0.17
PABPC4-216ENST00000492468 KLRF2D3W0D1 207 aa16.08■□□□□ 0.17
PABPC4-216ENST00000492468 FGGP02679 453 aa16.08■□□□□ 0.17
PABPC4-216ENST00000492468 H2AFZP0C0S5 128 aa16.08■□□□□ 0.17
PABPC4-216ENST00000492468 UCHL3P15374 230 aa16.08■□□□□ 0.17
PABPC4-216ENST00000492468 IFI35P80217 286 aaPredicted RBP16.08■□□□□ 0.17
PABPC4-216ENST00000492468 MKRN4PQ13434 485 aaPredicted RBP16.08■□□□□ 0.17
PABPC4-216ENST00000492468 CAVIN4Q5BKX8 364 aa16.08■□□□□ 0.17
PABPC4-216ENST00000492468 C12orf60Q5U649 245 aa16.08■□□□□ 0.17
PABPC4-216ENST00000492468 MIS18BP1Q6P0N0 1132 aa16.08■□□□□ 0.17
PABPC4-216ENST00000492468 ZDHHC24Q6UX98 284 aa16.08■□□□□ 0.17
PABPC4-216ENST00000492468 H2AFVQ71UI9 128 aa16.08■□□□□ 0.17
PABPC4-216ENST00000492468 DAAM2Q86T65 1068 aa16.08■□□□□ 0.17
PABPC4-216ENST00000492468 REXO1Q8N1G1 1221 aaKnown RBP16.08■□□□□ 0.17
PABPC4-216ENST00000492468 RBM46Q8TBY0 533 aaKnown RBP16.08■□□□□ 0.17
PABPC4-216ENST00000492468 TMEM109Q9BVC6 243 aa16.08■□□□□ 0.17
PABPC4-216ENST00000492468 RAB34Q9BZG1 259 aa16.08■□□□□ 0.17
PABPC4-216ENST00000492468 ESYT2A0FGR8 921 aa16.08■□□□□ 0.16
PABPC4-216ENST00000492468 SPDYE3A6NKU9 549 aa16.08■□□□□ 0.16
PABPC4-216ENST00000492468 RGS16O15492 202 aaPredicted RBP16.08■□□□□ 0.16
PABPC4-216ENST00000492468 EDIL3O43854 480 aa16.08■□□□□ 0.16
PABPC4-216ENST00000492468 DIAPH2O60879 1101 aa16.08■□□□□ 0.16
PABPC4-216ENST00000492468 NTSR2O95665 410 aa16.08■□□□□ 0.16
PABPC4-216ENST00000492468 GOLGA8HP0CJ92 632 aa16.08■□□□□ 0.16
PABPC4-216ENST00000492468 EPS15P42566 896 aa16.08■□□□□ 0.16
PABPC4-216ENST00000492468 INHBEP58166 350 aa16.08■□□□□ 0.16
PABPC4-216ENST00000492468 SF3A3Q12874 501 aaKnown RBP eCLIP16.08■□□□□ 0.167e-9■■■■□ 19.8
PABPC4-216ENST00000492468 PPP2R5EQ16537 467 aa16.08■□□□□ 0.16
PABPC4-216ENST00000492468 KRT79Q5XKE5 535 aa16.08■□□□□ 0.16
PABPC4-216ENST00000492468 TMEM47Q9BQJ4 181 aa16.08■□□□□ 0.16
PABPC4-216ENST00000492468 CPVLQ9H3G5 476 aa16.08■□□□□ 0.16
PABPC4-216ENST00000492468 CORO1CQ9ULV4 474 aaPredicted RBP16.08■□□□□ 0.16
PABPC4-216ENST00000492468 RPTORQ8N122 1335 aa16.08■□□□□ 0.16
PABPC4-216ENST00000492468 TAF1P21675 1872 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 FAM187AA6NFU0 413 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 IGF2BP3O00425 579 aaKnown RBP eCLIP16.07■□□□□ 0.16
PABPC4-216ENST00000492468 DDX3YO15523 660 aaKnown RBP16.07■□□□□ 0.16
PABPC4-216ENST00000492468 VIMP08670 466 aaKnown RBP16.07■□□□□ 0.16
PABPC4-216ENST00000492468 SLC9A1P19634 815 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 DR1Q01658 176 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 ADCY2Q08462 1091 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 ECM1Q16610 540 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 SLC4A8Q2Y0W8 1093 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 DCAF12L1Q5VU92 463 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 CAPRIN2Q6IMN6 1127 aaKnown RBP16.07■□□□□ 0.16
PABPC4-216ENST00000492468 CROCCP2Q86T23 111 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 NELFCDQ8IXH7 590 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 ECT2Q9H8V3 914 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 HOMER3Q9NSC5 361 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 TMEM260Q9NX78 707 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 BIN2Q9UBW5 565 aaPredicted RBP16.07■□□□□ 0.16
PABPC4-216ENST00000492468 CNOT7Q9UIV1 285 aaKnown RBP16.07■□□□□ 0.16
PABPC4-216ENST00000492468 TDP2O95551 362 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 PDE6CP51160 858 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 PARP10Q53GL7 1025 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 C6orf118Q5T5N4 469 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 SOGA3Q5TF21 947 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 BTNL9Q6UXG8 535 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 DYNLL2Q96FJ2 89 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 MOV10L1Q9BXT6 1211 aaKnown RBP16.07■□□□□ 0.16
PABPC4-216ENST00000492468 AMFRQ9UKV5 643 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 MTMR7Q9Y216 660 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 DAAM1Q9Y4D1 1078 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 NCANO14594 1321 aa16.07■□□□□ 0.16
PABPC4-216ENST00000492468 NAV1Q8NEY1 1877 aa16.06■□□□□ 0.16
PABPC4-216ENST00000492468 KIAA0391O15091 583 aaKnown RBP16.06■□□□□ 0.16
PABPC4-216ENST00000492468 CCNG1P51959 295 aa16.06■□□□□ 0.16
PABPC4-216ENST00000492468 DRG2P55039 364 aaKnown RBP16.06■□□□□ 0.16
PABPC4-216ENST00000492468 BNIP1Q12981 228 aa16.06■□□□□ 0.16
PABPC4-216ENST00000492468 BLMHQ13867 455 aa16.06■□□□□ 0.16
PABPC4-216ENST00000492468 CNGA2Q16280 664 aa16.06■□□□□ 0.16
PABPC4-216ENST00000492468 EDRF1Q3B7T1 1238 aa16.06■□□□□ 0.16
PABPC4-216ENST00000492468 FBXO33Q7Z6M2 555 aa16.06■□□□□ 0.16
PABPC4-216ENST00000492468 EGFL6Q8IUX8 553 aa16.06■□□□□ 0.16
PABPC4-216ENST00000492468 SCFD1Q8WVM8 642 aa16.06■□□□□ 0.16
PABPC4-216ENST00000492468 PRCCQ92733 491 aaPredicted RBP16.06■□□□□ 0.16
PABPC4-216ENST00000492468 KIF9Q9HAQ2 790 aa16.06■□□□□ 0.16
PABPC4-216ENST00000492468 GOPCQ9HD26 462 aa16.06■□□□□ 0.16
PABPC4-216ENST00000492468 ARHGEF3Q9NR81 526 aa16.06■□□□□ 0.16
PABPC4-216ENST00000492468 SPATS2LQ9NUQ6 558 aaKnown RBP16.06■□□□□ 0.16
PABPC4-216ENST00000492468 HDAC9Q9UKV0 1011 aa16.06■□□□□ 0.16
PABPC4-216ENST00000492468 DIS3Q9Y2L1 958 aaKnown RBP16.06■□□□□ 0.16
PABPC4-216ENST00000492468 TLDC2A0PJX2 215 aa16.06■□□□□ 0.16
PABPC4-216ENST00000492468 EME2A4GXA9 379 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms