RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 FAM49AQ9H0Q0 323 aaPredicted RBP9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 LMAN2LQ9H0V9 348 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 UBE2ZQ9H832 354 aaPredicted RBP9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 CDHR5Q9HBB8 845 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 ERVK-5Q9HDB9 667 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 ZNF302Q9NR11 478 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 PCDHA10Q9Y5I2 948 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 KIAA1671Q9BY89 1806 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 ADGRA3Q8IWK6 1321 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 MSH4O15457 936 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 GPR32O75388 356 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 COL9A1P20849 921 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 Q4G0T1 1027 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 TIGD5Q53EQ6 642 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 PRR16Q569H4 304 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 NAALADL2Q58DX5 795 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 PDXDC2PQ6P474 469 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 NPAS4Q8IUM7 802 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 CMTR2Q8IYT2 770 aaKnown RBP9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 BANK1Q8NDB2 785 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 CCDC148Q8NFR7 591 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 TMEM40Q8WWA1 233 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 P2RX5Q93086 422 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 CEP89Q96ST8 783 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 C11orf84Q9BUA3 381 aaPredicted RBP9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 NCOA5Q9HCD5 579 aaKnown RBP9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 PLAGL2Q9UPG8 496 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 CYP46A1Q9Y6A2 500 aa9.5□□□□□ -0.89
SMARCB1-207ENST00000491967 GRXCR2A6NFK2 248 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 C9IYK1 514 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 M0QZ92 97 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 DDX39AO00148 427 aaKnown RBP9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 BACH1O14867 736 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 MAGEB2O15479 319 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 NCK2O43639 380 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 ZNF862O60290 1169 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 PSMD10O75832 226 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 STBD1O95210 358 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 PSAPP07602 524 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 LTBRP36941 435 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 CRYBB1P53674 252 aaPredicted RBP9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 CCT2P78371 535 aaKnown RBP9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 TMEM62Q0P6H9 643 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 DSC3Q14574 896 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 TARBP2Q15633 366 aaKnown RBP9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 PUS10Q3MIT2 529 aaKnown RBP9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 GALNT17Q6IS24 598 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 MOXD1Q6UVY6 613 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 FAM178BQ8IXR5 827 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 RDM1Q8NG50 284 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 RASGRP4Q8TDF6 673 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 PABPC5Q96DU9 382 aaKnown RBP9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 SLC26A6Q9BXS9 759 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 C22orf23Q9BZE7 217 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 ADAMTS10Q9H324 1103 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 NSUN3Q9H649 340 aaKnown RBP9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 CD320Q9NPF0 282 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 RGS18Q9NS28 235 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 VPS54Q9P1Q0 977 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 NAP1L2Q9ULW6 460 aaPredicted RBP9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 PCDHA4Q9UN74 947 aa9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 NOC2LQ9Y3T9 749 aaKnown RBP9.49□□□□□ -0.89
SMARCB1-207ENST00000491967 IGKV6-21A0A0C4DH24 114 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 WDR64B1ANS9 1081 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 GRM6O15303 877 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 MGEA5O60502 916 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 DEXIO95424 95 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 MMP1P03956 469 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 STAG3L1P0CL83 205 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 SFNP31947 248 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 CTNNB1P35222 781 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 SARSP49591 514 aaKnown RBP9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 AKAP17AQ02040 695 aaKnown RBP9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 SSRP1Q08945 709 aaKnown RBP9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 PAK2Q13177 524 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 BTG3Q14201 252 aaPredicted RBP9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 TCEAL5Q5H9L2 206 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 SLC24A5Q71RS6 500 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 TRIM22Q8IYM9 498 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 ETNPPLQ8TBG4 499 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 SPPL3Q8TCT6 385 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 FAM167AQ96KS9 214 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 NIFKQ9BYG3 293 aaKnown RBP9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 ELAC1Q9H777 363 aaKnown RBP9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 DISC1Q9NRI5 854 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 C1orf112Q9NSG2 853 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 ST3GAL5Q9UNP4 418 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 CEP131Q9UPN4 1083 aa9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 MRPL42Q9Y6G3 142 aaKnown RBP9.48□□□□□ -0.89
SMARCB1-207ENST00000491967 PLXNA4Q9HCM2 1894 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 PI4K2BG5E9Z4 385 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 GPR182O15218 404 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 PPFIA3O75145 1194 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 RPS6KA5O75582 802 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 ITGB1P05556 798 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 KCNA5P22460 613 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 DNAJB1P25685 340 aa9.47□□□□□ -0.89
SMARCB1-207ENST00000491967 JAK3P52333 1124 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms