RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 CSPG5O95196 566 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 ATG7O95352 703 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 FOSP01100 380 aaPredicted RBP12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 HSP90AA1P07900 732 aaKnown RBP12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 IL9P15248 144 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 KCNA5P22460 613 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 CTNNB1P35222 781 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 STAT5BP51692 787 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 AP3B2Q13367 1082 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 TCEAL5Q5H9L2 206 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 GALNT17Q6IS24 598 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 CCDC83Q8IWF9 413 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 RASGRP4Q8TDF6 673 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 SNX21Q969T3 373 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 ZNF689Q96CS4 500 aaPredicted RBP12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 TMX3Q96JJ7 454 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 SAMD11Q96NU1 681 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 AZI2Q9H6S1 392 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 TRPV2Q9Y5S1 764 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 PRR33A8MZF0 331 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 GRM6O15303 877 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 EDIL3O43854 480 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 ATP4AP20648 1035 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 GATMP50440 423 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 TMEM266Q2M3C6 531 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 LEXMQ3ZCV2 418 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 MTHFD1LQ6UB35 978 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 ABHD15Q6UXT9 468 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 PLPPR4Q7Z2D5 763 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 RSPH3Q86UC2 560 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 PLA2G4DQ86XP0 818 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 CRIPAKQ8N1N5 446 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 FIBCD1Q8N539 461 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 BANK1Q8NDB2 785 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 TMX1Q9H3N1 280 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 BRMS1Q9HCU9 246 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 PCDHA2Q9Y5H9 948 aa12.48□□□□□ -0.41
TMEM39A-211ENST00000491685 STK36Q9NRP7 1315 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 IGSF9BQ9UPX0 1349 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 ESYT2A0FGR8 921 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 POTEB3A0JP26 581 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 RRN3P2A6NIE6 340 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 ZBTB42B2RXF5 422 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 H3BQ06 376 aaPredicted RBP12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 DGKIO75912 1065 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 ZNF76P36508 570 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 BECN1Q14457 450 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 SAFBQ15424 915 aaKnown RBP eCLIP12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 TIGD5Q53EQ6 642 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 POTEBQ6S5H4 581 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 NIPA1Q7RTP0 329 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 TMEM40Q8WWA1 233 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 PPP1R16BQ96T49 567 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 ZMYND12Q9H0C1 365 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 CDHR5Q9HBB8 845 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 PADI3Q9ULW8 664 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 SMC3Q9UQE7 1217 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 MRPL42Q9Y6G3 142 aaKnown RBP12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 WDFY4Q6ZS81 3184 aa12.47□□□□□ -0.41
TMEM39A-211ENST00000491685 C5orf67F2Z3F1 127 aa12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 K7ELQ4 463 aaPredicted RBP12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 BACH1O14867 736 aa12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 MGEA5O60502 916 aa12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 CYP3A4P08684 503 aa12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 PDIA4P13667 645 aaKnown RBP12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 IBSPP21815 317 aaPredicted RBP12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 KLRC1P26715 233 aa12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 PAK2Q13177 524 aa12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 BTG3Q14201 252 aaPredicted RBP12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 COL19A1Q14993 1142 aa12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 PTPROQ16827 1216 aa12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 PAN2Q504Q3 1202 aaKnown RBP12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 IER5Q5VY09 327 aa12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 FAM43BQ6ZT52 329 aaPredicted RBP12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 REXO1Q8N1G1 1221 aaKnown RBP12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 NEK9Q8TD19 979 aa12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 ATP8B4Q8TF62 1192 aa12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 CLP1Q92989 425 aaKnown RBP12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 LENG9Q96B70 501 aa12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 CELF4Q9BZC1 486 aaKnown RBP12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 NSUN3Q9H649 340 aaKnown RBP12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 ZNF302Q9NR11 478 aa12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 DAXXQ9UER7 740 aaPredicted RBP12.46□□□□□ -0.41
TMEM39A-211ENST00000491685 KDM3AQ9Y4C1 1321 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 SMIM35A0A1B0GVV1 85 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 IPO5O00410 1097 aaKnown RBP12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 LARGE1O95461 756 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 C22orf31O95567 290 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 DNAJB1P25685 340 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 GTF2F1P35269 517 aaKnown RBP eCLIP12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 BMPR1AP36894 532 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 ANP32AP39687 249 aaKnown RBP12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 MRE11P49959 708 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 KRT76Q01546 638 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 CAMK1Q14012 370 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 PTCRAQ6ISU1 281 aaPredicted RBP12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 SWSAP1Q6NVH7 229 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 PDXDC2PQ6P474 469 aa12.45□□□□□ -0.42
TMEM39A-211ENST00000491685 TRMT1LQ7Z2T5 733 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms