RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 ATG7O95352 703 aa23.56■■□□□ 1.36
CLIP2-208ENST00000491075 IBSPP21815 317 aaPredicted RBP23.56■■□□□ 1.36
CLIP2-208ENST00000491075 SIGLEC14Q08ET2 396 aa23.56■■□□□ 1.36
CLIP2-208ENST00000491075 CEP55Q53EZ4 464 aa23.56■■□□□ 1.36
CLIP2-208ENST00000491075 CYP2W1Q8TAV3 490 aa23.56■■□□□ 1.36
CLIP2-208ENST00000491075 SUSD6Q92537 303 aa23.56■■□□□ 1.36
CLIP2-208ENST00000491075 NEK1Q96PY6 1258 aa23.56■■□□□ 1.36
CLIP2-208ENST00000491075 PHOX2BQ99453 314 aa23.56■■□□□ 1.36
CLIP2-208ENST00000491075 AGO4Q9HCK5 861 aaKnown RBP23.56■■□□□ 1.36
CLIP2-208ENST00000491075 RGS18Q9NS28 235 aa23.56■■□□□ 1.36
CLIP2-208ENST00000491075 GINS2Q9Y248 185 aa23.56■■□□□ 1.36
CLIP2-208ENST00000491075 COL1A2P08123 1366 aa23.55■■□□□ 1.36
CLIP2-208ENST00000491075 TBKBP1A7MCY6 615 aa23.55■■□□□ 1.36
CLIP2-208ENST00000491075 PER2O15055 1255 aa23.55■■□□□ 1.36
CLIP2-208ENST00000491075 HBP1O60381 514 aa23.55■■□□□ 1.36
CLIP2-208ENST00000491075 MGEA5O60502 916 aa23.55■■□□□ 1.36
CLIP2-208ENST00000491075 FGF18O76093 207 aa23.55■■□□□ 1.36
CLIP2-208ENST00000491075 FOSP01100 380 aaPredicted RBP23.55■■□□□ 1.36
CLIP2-208ENST00000491075 SRGAP2BP0DMP2 458 aa23.55■■□□□ 1.36
CLIP2-208ENST00000491075 KLRC1P26715 233 aa23.55■■□□□ 1.36
CLIP2-208ENST00000491075 ITGB3BPQ13352 177 aaPredicted RBP23.55■■□□□ 1.36
CLIP2-208ENST00000491075 DUSP6Q16828 381 aa23.55■■□□□ 1.36
CLIP2-208ENST00000491075 SLC24A5Q71RS6 500 aa23.55■■□□□ 1.36
CLIP2-208ENST00000491075 THNSL1Q8IYQ7 743 aa23.55■■□□□ 1.36
CLIP2-208ENST00000491075 FANCBQ8NB91 859 aa23.55■■□□□ 1.36
CLIP2-208ENST00000491075 RPGRIP1Q96KN7 1286 aa23.55■■□□□ 1.36
CLIP2-208ENST00000491075 ADAM2Q99965 735 aa23.55■■□□□ 1.36
CLIP2-208ENST00000491075 MYH9P35579 1960 aaKnown RBP23.54■■□□□ 1.36
CLIP2-208ENST00000491075 IGKV6D-21A0A0A0MT36 114 aa23.54■■□□□ 1.36
CLIP2-208ENST00000491075 ARP10275 920 aa23.54■■□□□ 1.36
CLIP2-208ENST00000491075 FAM160B1Q5W0V3 765 aa23.54■■□□□ 1.36
CLIP2-208ENST00000491075 PPP1R18Q6NYC8 613 aa23.54■■□□□ 1.36
CLIP2-208ENST00000491075 RAB11FIP4Q86YS3 637 aa23.54■■□□□ 1.36
CLIP2-208ENST00000491075 COLGALT1Q8NBJ5 622 aa23.54■■□□□ 1.36
CLIP2-208ENST00000491075 VN1R2Q8NFZ6 395 aa23.54■■□□□ 1.36
CLIP2-208ENST00000491075 RIC8AQ9NPQ8 531 aa23.54■■□□□ 1.36
CLIP2-208ENST00000491075 NOC2LQ9Y3T9 749 aaKnown RBP23.54■■□□□ 1.36
CLIP2-208ENST00000491075 C9IYK1 514 aa23.53■■□□□ 1.36
CLIP2-208ENST00000491075 GPR182O15218 404 aa23.53■■□□□ 1.36
CLIP2-208ENST00000491075 NAPAP54920 295 aa23.53■■□□□ 1.36
CLIP2-208ENST00000491075 WWC2Q6AWC2 1192 aa23.53■■□□□ 1.36
CLIP2-208ENST00000491075 MICU3Q86XE3 530 aa23.53■■□□□ 1.36
CLIP2-208ENST00000491075 KIAA0319LQ8IZA0 1049 aa23.53■■□□□ 1.36
CLIP2-208ENST00000491075 TMEM40Q8WWA1 233 aa23.53■■□□□ 1.36
CLIP2-208ENST00000491075 ANO3Q9BYT9 981 aa23.53■■□□□ 1.36
CLIP2-208ENST00000491075 TMEM260Q9NX78 707 aa23.53■■□□□ 1.36
CLIP2-208ENST00000491075 ST3GAL5Q9UNP4 418 aa23.53■■□□□ 1.36
CLIP2-208ENST00000491075 LZTS1Q9Y250 596 aa23.53■■□□□ 1.36
CLIP2-208ENST00000491075 MEIS1O00470 390 aa23.52■■□□□ 1.36
CLIP2-208ENST00000491075 BACH1O14867 736 aa23.52■■□□□ 1.36
CLIP2-208ENST00000491075 FSCN2O14926 492 aa23.52■■□□□ 1.36
CLIP2-208ENST00000491075 LAG3P18627 525 aa23.52■■□□□ 1.36
CLIP2-208ENST00000491075 ERVFC1P60507 584 aa23.52■■□□□ 1.36
CLIP2-208ENST00000491075 RBM10P98175 930 aaKnown RBP23.52■■□□□ 1.36
CLIP2-208ENST00000491075 TCF15Q12870 199 aa23.52■■□□□ 1.36
CLIP2-208ENST00000491075 FAM102BQ5T8I3 360 aa23.52■■□□□ 1.36
CLIP2-208ENST00000491075 TMEM184AQ6ZMB5 413 aa23.52■■□□□ 1.36
CLIP2-208ENST00000491075 SGMS1Q86VZ5 419 aa23.52■■□□□ 1.36
CLIP2-208ENST00000491075 PGBD1Q96JS3 809 aa23.52■■□□□ 1.36
CLIP2-208ENST00000491075 TYW1Q9NV66 732 aaKnown RBP23.52■■□□□ 1.36
CLIP2-208ENST00000491075 TMEM161AQ9NX61 479 aa23.52■■□□□ 1.36
CLIP2-208ENST00000491075 CNTNAP5Q8WYK1 1306 aa23.52■■□□□ 1.36
CLIP2-208ENST00000491075 ST18O60284 1047 aa23.51■■□□□ 1.35
CLIP2-208ENST00000491075 CCNE2O96020 404 aa23.51■■□□□ 1.35
CLIP2-208ENST00000491075 SREBF1P36956 1147 aa23.51■■□□□ 1.35
CLIP2-208ENST00000491075 ADCY7P51828 1080 aa23.51■■□□□ 1.35
CLIP2-208ENST00000491075 COL9A3Q14050 684 aaPredicted RBP23.51■■□□□ 1.35
CLIP2-208ENST00000491075 PTPN21Q16825 1174 aa23.51■■□□□ 1.35
CLIP2-208ENST00000491075 ZNF484Q5JVG2 852 aa23.51■■□□□ 1.35
CLIP2-208ENST00000491075 ABHD15Q6UXT9 468 aa23.51■■□□□ 1.35
CLIP2-208ENST00000491075 NIPA1Q7RTP0 329 aa23.51■■□□□ 1.35
CLIP2-208ENST00000491075 RASGRP4Q8TDF6 673 aa23.51■■□□□ 1.35
CLIP2-208ENST00000491075 ASIC4Q96FT7 647 aa23.51■■□□□ 1.35
CLIP2-208ENST00000491075 ELAC1Q9H777 363 aaKnown RBP23.51■■□□□ 1.35
CLIP2-208ENST00000491075 CDHR5Q9HBB8 845 aa23.51■■□□□ 1.35
CLIP2-208ENST00000491075 ATP6V0A4Q9HBG4 840 aa23.51■■□□□ 1.35
CLIP2-208ENST00000491075 HCSTQ9UBK5 93 aa23.51■■□□□ 1.35
CLIP2-208ENST00000491075 CFAP54Q96N23 3096 aa23.51■■□□□ 1.35
CLIP2-208ENST00000491075 SLC27A2O14975 620 aa23.5■■□□□ 1.35
CLIP2-208ENST00000491075 CRYBB1P53674 252 aaPredicted RBP23.5■■□□□ 1.35
CLIP2-208ENST00000491075 AP3B2Q13367 1082 aa23.5■■□□□ 1.35
CLIP2-208ENST00000491075 KCNC3Q14003 757 aa23.5■■□□□ 1.35
CLIP2-208ENST00000491075 TYW1BQ6NUM6 668 aa23.5■■□□□ 1.35
CLIP2-208ENST00000491075 PDXDC2PQ6P474 469 aa23.5■■□□□ 1.35
CLIP2-208ENST00000491075 SYNE3Q6ZMZ3 975 aa23.5■■□□□ 1.35
CLIP2-208ENST00000491075 CCDC60Q8IWA6 550 aaPredicted RBP23.5■■□□□ 1.35
CLIP2-208ENST00000491075 CWH43Q9H720 699 aa23.5■■□□□ 1.35
CLIP2-208ENST00000491075 ZNF302Q9NR11 478 aa23.5■■□□□ 1.35
CLIP2-208ENST00000491075 RBM28Q9NW13 759 aaKnown RBP23.5■■□□□ 1.35
CLIP2-208ENST00000491075 PUF60Q9UHX1 559 aaKnown RBP23.5■■□□□ 1.35
CLIP2-208ENST00000491075 hCG_1984214I3L0E3 225 aa23.49■■□□□ 1.35
CLIP2-208ENST00000491075 DDX39AO00148 427 aaKnown RBP23.49■■□□□ 1.35
CLIP2-208ENST00000491075 ZNF76P36508 570 aa23.49■■□□□ 1.35
CLIP2-208ENST00000491075 PLCB3Q01970 1234 aa23.49■■□□□ 1.35
CLIP2-208ENST00000491075 PLPP4Q5VZY2 271 aa23.49■■□□□ 1.35
CLIP2-208ENST00000491075 ANKRD54Q6NXT1 300 aa23.49■■□□□ 1.35
CLIP2-208ENST00000491075 FAM228AQ86W67 206 aa23.49■■□□□ 1.35
CLIP2-208ENST00000491075 ZNF713Q8N859 430 aaPredicted RBP23.49■■□□□ 1.35
CLIP2-208ENST00000491075 MRPS27Q92552 414 aaKnown RBP23.49■■□□□ 1.35
CLIP2-208ENST00000491075 LRRC2Q9BYS8 371 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms