RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 C7orf25Q9BPX7 421 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 CDK8P49336 464 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 DRP2Q13474 957 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 SLC29A2Q14542 456 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 SEC23AQ15436 765 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.87□□□□□ -0.19
SHOX2-205ENST00000490689 NAP1L4Q99733 375 aaKnown RBP13.87□□□□□ -0.19
SHOX2-205ENST00000490689 HEMGNQ9BXL5 484 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 ANAPC5Q9UJX4 755 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 RTCBQ9Y3I0 505 aaKnown RBP13.87□□□□□ -0.19
SHOX2-205ENST00000490689 TROVE2P10155 538 aaKnown RBP eCLIP13.87□□□□□ -0.19
SHOX2-205ENST00000490689 CA4P22748 312 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 PSMC2P35998 433 aaKnown RBP13.87□□□□□ -0.19
SHOX2-205ENST00000490689 KCNJ1P48048 391 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 SCNN1DP51172 638 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 GALCP54803 685 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 LONRF1Q17RB8 773 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 GJB7Q6PEY0 223 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 CLEC10AQ8IUN9 316 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 TEX2Q8IWB9 1127 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 CFAP61Q8NHU2 1237 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 TSC22D3Q99576 134 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 TRIM4Q9C037 500 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 TMOD2Q9NZR1 351 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 AGTPBP1Q9UPW5 1226 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 USH1CQ9Y6N9 552 aa13.87□□□□□ -0.19
SHOX2-205ENST00000490689 AGPSO00116 658 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 CAND2O75155 1236 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 CIB2O75838 187 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 TRIM49P0CI25 452 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 TRIM49CP0CI26 452 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 DLATP10515 647 aaKnown RBP13.86□□□□□ -0.19
SHOX2-205ENST00000490689 BYSLQ13895 437 aaKnown RBP13.86□□□□□ -0.19
SHOX2-205ENST00000490689 SLMAPQ14BN4 828 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 ARHGEF18Q6ZSZ5 1173 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 TRPM8Q7Z2W7 1104 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 PROM2Q8N271 834 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 TMBIM4Q9HC24 238 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 A0A1W2PQJ5 194 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 TOM1O60784 492 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 CTAGE3PQ8IX95 158 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 EHMT1Q9H9B1 1298 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 KBTBD4Q9NVX7 518 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 ITSN1Q15811 1721 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 LOC102724428A0A0B4J2F2 783 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 OPLAHO14841 1288 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 GAS7O60861 476 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 UCHL3P15374 230 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 SIK1P57059 783 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 ERVK-9P63128 1117 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 STAMBPL1Q96FJ0 436 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 CEP95Q96GE4 821 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 FAM84BQ96KN1 310 aaPredicted RBP13.86□□□□□ -0.19
SHOX2-205ENST00000490689 RILPQ96NA2 401 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 MINPP1Q9UNW1 487 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 K7ENM7 598 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 DRAP1Q14919 205 aaPredicted RBP13.86□□□□□ -0.19
SHOX2-205ENST00000490689 RFX8Q6ZV50 586 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 IRF2BP1Q8IU81 584 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 CAVIN3Q969G5 261 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 HOOK2Q96ED9 719 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 TGS1Q96RS0 853 aaKnown RBP13.86□□□□□ -0.19
SHOX2-205ENST00000490689 CARD10Q9BWT7 1032 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 OSBPL1AQ9BXW6 950 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 SLITRK6Q9H5Y7 841 aa13.86□□□□□ -0.19
SHOX2-205ENST00000490689 IGF2BP3O00425 579 aaKnown RBP eCLIP13.85□□□□□ -0.19
SHOX2-205ENST00000490689 NR3C1P04150 777 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 RAD23BP54727 409 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 RCN2Q14257 317 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 GRM4Q14833 912 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 CCDC137Q6PK04 289 aaKnown RBP13.85□□□□□ -0.19
SHOX2-205ENST00000490689 USP37Q86T82 979 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 CNPY4Q8N129 248 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 C1orf54Q8WWF1 131 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 DCTN4Q9UJW0 460 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 TCRBV5S4A2TA0A5A2 114 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 CLUL1Q15846 466 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 SPICE1Q8N0Z3 855 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 RUBCNQ92622 972 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 DONSONQ9NYP3 566 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 OPHN1O60890 802 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 SPAG7O75391 227 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 ANP32DO95626 131 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 PRLRP16471 622 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 CTTNQ14247 550 aaKnown RBP13.85□□□□□ -0.19
SHOX2-205ENST00000490689 LRIG3Q6UXM1 1119 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 AEBP2Q6ZN18 517 aaPredicted RBP13.85□□□□□ -0.19
SHOX2-205ENST00000490689 PDCD7Q8N8D1 485 aaKnown RBP13.85□□□□□ -0.19
SHOX2-205ENST00000490689 CEP63Q96MT8 703 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 UBXN6Q9BZV1 441 aa13.85□□□□□ -0.19
SHOX2-205ENST00000490689 EXOC1LA0A1B0GW35 172 aa13.84□□□□□ -0.19
SHOX2-205ENST00000490689 ARHGAP42A6NI28 874 aa13.84□□□□□ -0.19
SHOX2-205ENST00000490689 RASA4BC9J798 803 aa13.84□□□□□ -0.19
SHOX2-205ENST00000490689 RASA4O43374 803 aa13.84□□□□□ -0.19
SHOX2-205ENST00000490689 KIAA1755Q5JYT7 1200 aa13.84□□□□□ -0.19
SHOX2-205ENST00000490689 DCUN1D2Q6PH85 259 aa13.84□□□□□ -0.19
SHOX2-205ENST00000490689 FUKQ8N0W3 1084 aa13.84□□□□□ -0.19
SHOX2-205ENST00000490689 ANKRD35Q8N283 1001 aa13.84□□□□□ -0.19
SHOX2-205ENST00000490689 CCHCR1Q8TD31 782 aa13.84□□□□□ -0.19
SHOX2-205ENST00000490689 LEMD3Q9Y2U8 911 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms