RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 FAM43BQ6ZT52 329 aaPredicted RBP20.2■□□□□ 0.82
YIPF3-208ENST00000490447 ADHFE1Q8IWW8 467 aa20.2■□□□□ 0.82
YIPF3-208ENST00000490447 POP1Q99575 1024 aaKnown RBP20.2■□□□□ 0.82
YIPF3-208ENST00000490447 ZNF577Q9BSK1 485 aa20.2■□□□□ 0.82
YIPF3-208ENST00000490447 FAM217BQ9NTX9 383 aaPredicted RBP20.2■□□□□ 0.82
YIPF3-208ENST00000490447 PCDHB7Q9Y5E2 793 aa20.2■□□□□ 0.82
YIPF3-208ENST00000490447 DCXO43602 365 aa20.19■□□□□ 0.82
YIPF3-208ENST00000490447 LTBRP36941 435 aa20.19■□□□□ 0.82
YIPF3-208ENST00000490447 SARSP49591 514 aaKnown RBP20.19■□□□□ 0.82
YIPF3-208ENST00000490447 NDUFV1P49821 464 aa20.19■□□□□ 0.82
YIPF3-208ENST00000490447 SPOUT1Q5T280 376 aaKnown RBP20.19■□□□□ 0.82
YIPF3-208ENST00000490447 SKAP1Q86WV1 359 aa20.19■□□□□ 0.82
YIPF3-208ENST00000490447 REXO1Q8N1G1 1221 aaKnown RBP20.19■□□□□ 0.82
YIPF3-208ENST00000490447 CRIPAKQ8N1N5 446 aa20.19■□□□□ 0.82
YIPF3-208ENST00000490447 KLHL23Q8NBE8 558 aa20.19■□□□□ 0.82
YIPF3-208ENST00000490447 UIMC1Q96RL1 719 aa20.19■□□□□ 0.82
YIPF3-208ENST00000490447 UPF3BQ9BZI7 483 aaKnown RBP20.19■□□□□ 0.82
YIPF3-208ENST00000490447 TBC1D22BQ9NU19 505 aa20.19■□□□□ 0.82
YIPF3-208ENST00000490447 GPR182O15218 404 aa20.18■□□□□ 0.82
YIPF3-208ENST00000490447 ITGB1P05556 798 aa20.18■□□□□ 0.82
YIPF3-208ENST00000490447 CYP3A4P08684 503 aa20.18■□□□□ 0.82
YIPF3-208ENST00000490447 GNA11P29992 359 aa20.18■□□□□ 0.82
YIPF3-208ENST00000490447 AKAP17AQ02040 695 aaKnown RBP20.18■□□□□ 0.82
YIPF3-208ENST00000490447 DLX2Q07687 328 aaPredicted RBP20.18■□□□□ 0.82
YIPF3-208ENST00000490447 APOBRQ0VD83 1088 aa20.18■□□□□ 0.82
YIPF3-208ENST00000490447 SMAD2Q15796 467 aaKnown RBP20.18■□□□□ 0.82
YIPF3-208ENST00000490447 ZMYND12Q9H0C1 365 aa20.18■□□□□ 0.82
YIPF3-208ENST00000490447 TMX1Q9H3N1 280 aa20.18■□□□□ 0.82
YIPF3-208ENST00000490447 C1orf112Q9NSG2 853 aa20.18■□□□□ 0.82
YIPF3-208ENST00000490447 IGLV3-22A0A075B6J6 115 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 ESYT2A0FGR8 921 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 MBTPS2O43462 519 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 TBX10O75333 385 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 GTF2F1P35269 517 aaKnown RBP eCLIP20.17■□□□□ 0.82
YIPF3-208ENST00000490447 SMAD4Q13485 552 aaKnown RBP20.17■□□□□ 0.82
YIPF3-208ENST00000490447 ZNF746Q6NUN9 644 aaPredicted RBP20.17■□□□□ 0.82
YIPF3-208ENST00000490447 Q6ZUG5 572 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 TRMT1LQ7Z2T5 733 aaKnown RBP20.17■□□□□ 0.82
YIPF3-208ENST00000490447 SMAP1Q8IYB5 467 aaPredicted RBP20.17■□□□□ 0.82
YIPF3-208ENST00000490447 KIAA0319LQ8IZA0 1049 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 METTL13Q8N6R0 699 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 SPPL3Q8TCT6 385 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 POF1BQ8WVV4 589 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 BBXQ8WY36 941 aaPredicted RBP20.17■□□□□ 0.82
YIPF3-208ENST00000490447 BRF1Q92994 677 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 ADAM2Q99965 735 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 ERVK-5Q9HDB9 667 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 AAASQ9NRG9 546 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 CD207Q9UJ71 328 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 CEP131Q9UPN4 1083 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 NOC2LQ9Y3T9 749 aaKnown RBP20.17■□□□□ 0.82
YIPF3-208ENST00000490447 PCDHB12Q9Y5F1 795 aa20.17■□□□□ 0.82
YIPF3-208ENST00000490447 LINC01565O15544 149 aa20.16■□□□□ 0.82
YIPF3-208ENST00000490447 DHX15O43143 795 aaKnown RBP20.16■□□□□ 0.82
YIPF3-208ENST00000490447 PSAPP07602 524 aa20.16■□□□□ 0.82
YIPF3-208ENST00000490447 CPA1P15085 419 aa20.16■□□□□ 0.82
YIPF3-208ENST00000490447 GATMP50440 423 aa20.16■□□□□ 0.82
YIPF3-208ENST00000490447 CAMK1Q14012 370 aa20.16■□□□□ 0.82
YIPF3-208ENST00000490447 KIZQ2M2Z5 673 aa20.16■□□□□ 0.82
YIPF3-208ENST00000490447 BICD2Q8TD16 824 aa20.16■□□□□ 0.82
YIPF3-208ENST00000490447 JAKMIP1Q96N16 626 aaKnown RBP20.16■□□□□ 0.82
YIPF3-208ENST00000490447 PPP1R16BQ96T49 567 aa20.16■□□□□ 0.82
YIPF3-208ENST00000490447 RGS18Q9NS28 235 aa20.16■□□□□ 0.82
YIPF3-208ENST00000490447 ST3GAL5Q9UNP4 418 aa20.16■□□□□ 0.82
YIPF3-208ENST00000490447 SAMM50Q9Y512 469 aa20.16■□□□□ 0.82
YIPF3-208ENST00000490447 C5orf42Q9H799 3197 aa20.16■□□□□ 0.82
YIPF3-208ENST00000490447 C19orf67A6NJJ6 358 aa20.15■□□□□ 0.82
YIPF3-208ENST00000490447 TBKBP1A7MCY6 615 aa20.15■□□□□ 0.82
YIPF3-208ENST00000490447 PPFIA3O75145 1194 aa20.15■□□□□ 0.82
YIPF3-208ENST00000490447 DNAJB1P25685 340 aa20.15■□□□□ 0.82
YIPF3-208ENST00000490447 ADAM15Q13444 863 aa20.15■□□□□ 0.82
YIPF3-208ENST00000490447 PRR16Q569H4 304 aa20.15■□□□□ 0.82
YIPF3-208ENST00000490447 BLOC1S2Q6QNY1 142 aa20.15■□□□□ 0.82
YIPF3-208ENST00000490447 SLC24A5Q71RS6 500 aa20.15■□□□□ 0.82
YIPF3-208ENST00000490447 TMEM40Q8WWA1 233 aa20.15■□□□□ 0.82
YIPF3-208ENST00000490447 CRYGNQ8WXF5 182 aa20.15■□□□□ 0.82
YIPF3-208ENST00000490447 OSMRQ99650 979 aa20.15■□□□□ 0.82
YIPF3-208ENST00000490447 CDHR5Q9HBB8 845 aa20.15■□□□□ 0.82
YIPF3-208ENST00000490447 PCDHA10Q9Y5I2 948 aa20.15■□□□□ 0.82
YIPF3-208ENST00000490447 MAFBQ9Y5Q3 323 aaPredicted RBP20.15■□□□□ 0.82
YIPF3-208ENST00000490447 PRPF3O43395 683 aaKnown RBP20.14■□□□□ 0.81
YIPF3-208ENST00000490447 MGEA5O60502 916 aa20.14■□□□□ 0.81
YIPF3-208ENST00000490447 C22orf31O95567 290 aa20.14■□□□□ 0.81
YIPF3-208ENST00000490447 IRS1P35568 1242 aa20.14■□□□□ 0.81
YIPF3-208ENST00000490447 NRIP1P48552 1158 aa20.14■□□□□ 0.81
YIPF3-208ENST00000490447 CRYBB1P53674 252 aaPredicted RBP20.14■□□□□ 0.81
YIPF3-208ENST00000490447 CCDC148Q8NFR7 591 aa20.14■□□□□ 0.81
YIPF3-208ENST00000490447 MICAL1Q8TDZ2 1067 aa20.14■□□□□ 0.81
YIPF3-208ENST00000490447 FAM167AQ96KS9 214 aa20.14■□□□□ 0.81
YIPF3-208ENST00000490447 GABBR1Q9UBS5 961 aa20.14■□□□□ 0.81
YIPF3-208ENST00000490447 ZBTB42B2RXF5 422 aa20.13■□□□□ 0.81
YIPF3-208ENST00000490447 VTNP04004 478 aa20.13■□□□□ 0.81
YIPF3-208ENST00000490447 ATP4AP20648 1035 aa20.13■□□□□ 0.81
YIPF3-208ENST00000490447 UBE3AQ05086 875 aa20.13■□□□□ 0.81
YIPF3-208ENST00000490447 ADGRD2Q7Z7M1 963 aa20.13■□□□□ 0.81
YIPF3-208ENST00000490447 RBM23Q86U06 439 aaKnown RBP20.13■□□□□ 0.81
YIPF3-208ENST00000490447 EFHBQ8N7U6 833 aa20.13■□□□□ 0.81
YIPF3-208ENST00000490447 PHKBQ93100 1093 aa20.13■□□□□ 0.81
YIPF3-208ENST00000490447 MAP7D2Q96T17 732 aa20.13■□□□□ 0.81
YIPF3-208ENST00000490447 ATP6V0A4Q9HBG4 840 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms