RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 GINS2Q9Y248 185 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 IGSF9BQ9UPX0 1349 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 COL1A2P08123 1366 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 IGKV6D-21A0A0A0MT36 114 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 C5orf67F2Z3F1 127 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 KLRC1P26715 233 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 PUS10Q3MIT2 529 aaKnown RBP12.76□□□□□ -0.37
DUBR-204ENST00000490441 PRR16Q569H4 304 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 TCEAL5Q5H9L2 206 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 ZNF484Q5JVG2 852 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 ODR4Q5SWX8 454 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 PTCRAQ6ISU1 281 aaPredicted RBP12.76□□□□□ -0.37
DUBR-204ENST00000490441 ZNF746Q6NUN9 644 aaPredicted RBP12.76□□□□□ -0.37
DUBR-204ENST00000490441 SWSAP1Q6NVH7 229 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 CCDC60Q8IWA6 550 aaPredicted RBP12.76□□□□□ -0.37
DUBR-204ENST00000490441 SMAP1Q8IYB5 467 aaPredicted RBP12.76□□□□□ -0.37
DUBR-204ENST00000490441 PHKBQ93100 1093 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 UIMC1Q96RL1 719 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 SLC26A6Q9BXS9 759 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 RNF26Q9BY78 433 aaPredicted RBP12.76□□□□□ -0.37
DUBR-204ENST00000490441 LRFN2Q9ULH4 789 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 FAM50BQ9Y247 325 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 SAMM50Q9Y512 469 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 KDM3AQ9Y4C1 1321 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 NID2Q14112 1375 aa12.76□□□□□ -0.37
DUBR-204ENST00000490441 IGLV3-22A0A075B6J6 115 aa12.75□□□□□ -0.37
DUBR-204ENST00000490441 H3BQ06 376 aaPredicted RBP12.75□□□□□ -0.37
DUBR-204ENST00000490441 NCK2O43639 380 aa12.75□□□□□ -0.37
DUBR-204ENST00000490441 RPS6KA5O75582 802 aa12.75□□□□□ -0.37
DUBR-204ENST00000490441 DGKIO75912 1065 aa12.75□□□□□ -0.37
DUBR-204ENST00000490441 PSAPP07602 524 aa12.75□□□□□ -0.37
DUBR-204ENST00000490441 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
DUBR-204ENST00000490441 CD44P16070 742 aaKnown RBP12.75□□□□□ -0.37
DUBR-204ENST00000490441 IBSPP21815 317 aaPredicted RBP12.75□□□□□ -0.37
DUBR-204ENST00000490441 MYH9P35579 1960 aaKnown RBP12.75□□□□□ -0.37
DUBR-204ENST00000490441 NFX1Q12986 1120 aaKnown RBP12.75□□□□□ -0.37
DUBR-204ENST00000490441 PKN1Q16512 942 aa12.75□□□□□ -0.37
DUBR-204ENST00000490441 TMEM266Q2M3C6 531 aa12.75□□□□□ -0.37
DUBR-204ENST00000490441 FAM43BQ6ZT52 329 aaPredicted RBP12.75□□□□□ -0.37
DUBR-204ENST00000490441 CMTR2Q8IYT2 770 aaKnown RBP12.75□□□□□ -0.37
DUBR-204ENST00000490441 FBXL16Q8N461 479 aa12.75□□□□□ -0.37
DUBR-204ENST00000490441 CRYGNQ8WXF5 182 aa12.75□□□□□ -0.37
DUBR-204ENST00000490441 LINC01599Q8WXQ3 324 aa12.75□□□□□ -0.37
DUBR-204ENST00000490441 CLP1Q92989 425 aaKnown RBP12.75□□□□□ -0.37
DUBR-204ENST00000490441 ZNF689Q96CS4 500 aaPredicted RBP12.75□□□□□ -0.37
DUBR-204ENST00000490441 PABPC5Q96DU9 382 aaKnown RBP12.75□□□□□ -0.37
DUBR-204ENST00000490441 PLVAPQ9BX97 442 aa12.75□□□□□ -0.37
DUBR-204ENST00000490441 RC3H2Q9HBD1 1191 aaKnown RBP12.75□□□□□ -0.37
DUBR-204ENST00000490441 CEP131Q9UPN4 1083 aa12.75□□□□□ -0.37
DUBR-204ENST00000490441 LOXHD1Q8IVV2 1947 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 GRM6O15303 877 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 DHX15O43143 795 aaKnown RBP12.74□□□□□ -0.37
DUBR-204ENST00000490441 PPFIA3O75145 1194 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 CSPG5O95196 566 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 SSTR3P32745 418 aaPredicted RBP12.74□□□□□ -0.37
DUBR-204ENST00000490441 NBR1Q14596 966 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 PAN2Q504Q3 1202 aaKnown RBP12.74□□□□□ -0.37
DUBR-204ENST00000490441 TRMT1LQ7Z2T5 733 aaKnown RBP12.74□□□□□ -0.37
DUBR-204ENST00000490441 TRIM22Q8IYM9 498 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 METTL13Q8N6R0 699 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.74□□□□□ -0.37
DUBR-204ENST00000490441 RASGRP4Q8TDF6 673 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 PPP2R3CQ969Q6 453 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 FAM167AQ96KS9 214 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 MFRPQ9BY79 579 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 AGXT2Q9BYV1 514 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 CLDND1Q9NY35 253 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 VPS54Q9P1Q0 977 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 PCDHB7Q9Y5E2 793 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 PCDHA10Q9Y5I2 948 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 EVPLQ92817 2033 aa12.74□□□□□ -0.37
DUBR-204ENST00000490441 DENND3A2RUS2 1198 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 WDR64B1ANS9 1081 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 CPLX1O14810 134 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 GPR182O15218 404 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 MMP1P03956 469 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 LINC00271P0C7V0 271 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 IL9P15248 144 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 IFNAR1P17181 557 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 CIITAP33076 1130 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 NLRP5P59047 1200 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 CCT2P78371 535 aaKnown RBP12.73□□□□□ -0.37
DUBR-204ENST00000490441 NAALADL2Q58DX5 795 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 RTN4RL1Q86UN2 441 aaPredicted RBP12.73□□□□□ -0.37
DUBR-204ENST00000490441 FAM178BQ8IXR5 827 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 KIAA0319LQ8IZA0 1049 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 GJD3Q8N144 294 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 NEK9Q8TD19 979 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 MAP7D2Q96T17 732 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 PPP1R16BQ96T49 567 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 EPHX3Q9H6B9 360 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 SH3GLB2Q9NR46 395 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 C1orf112Q9NSG2 853 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 GABBR1Q9UBS5 961 aa12.73□□□□□ -0.37
DUBR-204ENST00000490441 MAFBQ9Y5Q3 323 aaPredicted RBP12.73□□□□□ -0.37
DUBR-204ENST00000490441 MRPL42Q9Y6G3 142 aaKnown RBP12.73□□□□□ -0.37
DUBR-204ENST00000490441 GRXCR2A6NFK2 248 aa12.72□□□□□ -0.37
DUBR-204ENST00000490441 MAGEB2O15479 319 aa12.72□□□□□ -0.37
DUBR-204ENST00000490441 GAS7O60861 476 aa12.72□□□□□ -0.37
DUBR-204ENST00000490441 C22orf31O95567 290 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms