RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 UGCGQ16739 394 aa22.28■■□□□ 1.16
SMC4-222ENST00000490207 NME8Q8N427 588 aa22.28■■□□□ 1.16
SMC4-222ENST00000490207 CELF4Q9BZC1 486 aaKnown RBP22.28■■□□□ 1.16
SMC4-222ENST00000490207 LIMCH1Q9UPQ0 1083 aa22.28■■□□□ 1.16
SMC4-222ENST00000490207 INSL6Q9Y581 213 aa22.28■■□□□ 1.16
SMC4-222ENST00000490207 RALGAPA2Q2PPJ7 1873 aa22.28■■□□□ 1.16
SMC4-222ENST00000490207 UNC80Q8N2C7 3258 aa22.28■■□□□ 1.16
SMC4-222ENST00000490207 KDM3AQ9Y4C1 1321 aa22.28■■□□□ 1.16
SMC4-222ENST00000490207 TRANK1O15050 2925 aa22.27■■□□□ 1.16
SMC4-222ENST00000490207 LINC01553A4QN01 128 aa22.27■■□□□ 1.16
SMC4-222ENST00000490207 RFXAPO00287 272 aa22.27■■□□□ 1.16
SMC4-222ENST00000490207 ZNF862O60290 1169 aa22.27■■□□□ 1.16
SMC4-222ENST00000490207 UPP2O95045 317 aa22.27■■□□□ 1.16
SMC4-222ENST00000490207 CD52P31358 61 aa22.27■■□□□ 1.16
SMC4-222ENST00000490207 HTRA4P83105 476 aaPredicted RBP22.27■■□□□ 1.16
SMC4-222ENST00000490207 NR5A1Q13285 461 aa22.27■■□□□ 1.16
SMC4-222ENST00000490207 PPP4R3AQ6IN85 833 aa22.27■■□□□ 1.16
SMC4-222ENST00000490207 B3GNT9Q6UX72 402 aa22.27■■□□□ 1.16
SMC4-222ENST00000490207 PPM1EQ8WY54 764 aa22.27■■□□□ 1.16
SMC4-222ENST00000490207 TOP1MTQ969P6 601 aa22.27■■□□□ 1.16
SMC4-222ENST00000490207 KIF2CQ99661 725 aa22.27■■□□□ 1.16
SMC4-222ENST00000490207 NAP1L4Q99733 375 aaKnown RBP22.27■■□□□ 1.16
SMC4-222ENST00000490207 AGO3Q9H9G7 860 aaKnown RBP22.27■■□□□ 1.16
SMC4-222ENST00000490207 FAM205CA6NFA0 338 aa22.26■■□□□ 1.15
SMC4-222ENST00000490207 CCNT1O60563 726 aaKnown RBP22.26■■□□□ 1.15
SMC4-222ENST00000490207 MMP1P03956 469 aa22.26■■□□□ 1.15
SMC4-222ENST00000490207 PAK2Q13177 524 aa22.26■■□□□ 1.15
SMC4-222ENST00000490207 TRIM29Q14134 588 aa22.26■■□□□ 1.15
SMC4-222ENST00000490207 EARS2Q5JPH6 523 aaKnown RBP22.26■■□□□ 1.15
SMC4-222ENST00000490207 CCDC83Q8IWF9 413 aa22.26■■□□□ 1.15
SMC4-222ENST00000490207 KIAA0319LQ8IZA0 1049 aa22.26■■□□□ 1.15
SMC4-222ENST00000490207 YME1L1Q96TA2 773 aa22.26■■□□□ 1.15
SMC4-222ENST00000490207 KCNMB3Q9NPA1 279 aa22.26■■□□□ 1.15
SMC4-222ENST00000490207 PRUNE2Q8WUY3 3088 aa22.26■■□□□ 1.15
SMC4-222ENST00000490207 GTPBP6O43824 516 aaPredicted RBP22.25■■□□□ 1.15
SMC4-222ENST00000490207 MICALL1Q8N3F8 863 aa22.25■■□□□ 1.15
SMC4-222ENST00000490207 METTL13Q8N6R0 699 aa22.25■■□□□ 1.15
SMC4-222ENST00000490207 SP7Q8TDD2 431 aaPredicted RBP22.25■■□□□ 1.15
SMC4-222ENST00000490207 TNFRSF25Q93038 417 aa22.25■■□□□ 1.15
SMC4-222ENST00000490207 TGS1Q96RS0 853 aaKnown RBP22.25■■□□□ 1.15
SMC4-222ENST00000490207 NRBP2Q9NSY0 501 aa22.25■■□□□ 1.15
SMC4-222ENST00000490207 MTUS1Q9ULD2 1270 aa22.25■■□□□ 1.15
SMC4-222ENST00000490207 GINS2Q9Y248 185 aa22.25■■□□□ 1.15
SMC4-222ENST00000490207 MAGEB2O15479 319 aa22.24■■□□□ 1.15
SMC4-222ENST00000490207 RBM25P49756 843 aaKnown RBP22.24■■□□□ 1.15
SMC4-222ENST00000490207 ERVK-21P61565 698 aa22.24■■□□□ 1.15
SMC4-222ENST00000490207 CCDC85BQ15834 202 aaPredicted RBP22.24■■□□□ 1.15
SMC4-222ENST00000490207 KRT40Q6A162 431 aa22.24■■□□□ 1.15
SMC4-222ENST00000490207 POTEDQ86YR6 584 aa22.24■■□□□ 1.15
SMC4-222ENST00000490207 DIS3L2Q8IYB7 885 aaKnown RBP22.24■■□□□ 1.15
SMC4-222ENST00000490207 LINC01599Q8WXQ3 324 aa22.24■■□□□ 1.15
SMC4-222ENST00000490207 FAM20AQ96MK3 541 aa22.24■■□□□ 1.15
SMC4-222ENST00000490207 PPP1R16BQ96T49 567 aa22.24■■□□□ 1.15
SMC4-222ENST00000490207 FTHL17Q9BXU8 183 aa22.24■■□□□ 1.15
SMC4-222ENST00000490207 SEPT9Q9UHD8 586 aaPredicted RBP22.24■■□□□ 1.15
SMC4-222ENST00000490207 PADI3Q9ULW8 664 aa22.24■■□□□ 1.15
SMC4-222ENST00000490207 TTC3P53804 2025 aa22.24■■□□□ 1.15
SMC4-222ENST00000490207 CLCN3P51790 818 aa22.23■■□□□ 1.15
SMC4-222ENST00000490207 GRB10Q13322 594 aa22.23■■□□□ 1.15
SMC4-222ENST00000490207 PPP2R5CQ13362 524 aa22.23■■□□□ 1.15
SMC4-222ENST00000490207 GDPD5Q8WTR4 605 aa22.23■■□□□ 1.15
SMC4-222ENST00000490207 ZSCAN31Q96LW9 406 aaPredicted RBP22.23■■□□□ 1.15
SMC4-222ENST00000490207 MAP7D2Q96T17 732 aa22.23■■□□□ 1.15
SMC4-222ENST00000490207 VAV3Q9UKW4 847 aa22.23■■□□□ 1.15
SMC4-222ENST00000490207 ENPP3O14638 875 aa22.22■■□□□ 1.15
SMC4-222ENST00000490207 TBX3O15119 743 aa22.22■■□□□ 1.15
SMC4-222ENST00000490207 VTNP04004 478 aa22.22■■□□□ 1.15
SMC4-222ENST00000490207 TMEM266Q2M3C6 531 aa22.22■■□□□ 1.15
SMC4-222ENST00000490207 EFCAB12Q6NXP0 572 aa22.22■■□□□ 1.15
SMC4-222ENST00000490207 LRRC71Q8N4P6 559 aa22.22■■□□□ 1.15
SMC4-222ENST00000490207 LINC01465Q8N7H1 131 aa22.22■■□□□ 1.15
SMC4-222ENST00000490207 BANK1Q8NDB2 785 aa22.22■■□□□ 1.15
SMC4-222ENST00000490207 LLPHQ9BRT6 129 aaKnown RBP22.22■■□□□ 1.15
SMC4-222ENST00000490207 SH2B1Q9NRF2 756 aaPredicted RBP22.22■■□□□ 1.15
SMC4-222ENST00000490207 MTCH2Q9Y6C9 303 aa22.22■■□□□ 1.15
SMC4-222ENST00000490207 ARID2Q68CP9 1835 aa22.22■■□□□ 1.15
SMC4-222ENST00000490207 BTBD18B2RXH4 712 aa22.21■■□□□ 1.15
SMC4-222ENST00000490207 MARCH6O60337 910 aa22.21■■□□□ 1.15
SMC4-222ENST00000490207 RPS6KA5O75582 802 aa22.21■■□□□ 1.15
SMC4-222ENST00000490207 POU3F3P20264 500 aaPredicted RBP22.21■■□□□ 1.15
SMC4-222ENST00000490207 TMOD1P28289 359 aa22.21■■□□□ 1.15
SMC4-222ENST00000490207 KIZQ2M2Z5 673 aa22.21■■□□□ 1.15
SMC4-222ENST00000490207 MTERF2Q49AM1 385 aa22.21■■□□□ 1.15
SMC4-222ENST00000490207 XKR3Q5GH77 459 aa22.21■■□□□ 1.15
SMC4-222ENST00000490207 TMEM40Q8WWA1 233 aa22.21■■□□□ 1.15
SMC4-222ENST00000490207 HAS1Q92839 578 aa22.21■■□□□ 1.15
SMC4-222ENST00000490207 OSMRQ99650 979 aa22.21■■□□□ 1.15
SMC4-222ENST00000490207 C17orf80Q9BSJ5 609 aa22.21■■□□□ 1.15
SMC4-222ENST00000490207 CDHR5Q9HBB8 845 aa22.21■■□□□ 1.15
SMC4-222ENST00000490207 AKT3Q9Y243 479 aa22.21■■□□□ 1.15
SMC4-222ENST00000490207 NOC2LQ9Y3T9 749 aaKnown RBP22.21■■□□□ 1.15
SMC4-222ENST00000490207 KIAA1671Q9BY89 1806 aa22.21■■□□□ 1.15
SMC4-222ENST00000490207 EML1O00423 815 aa22.2■■□□□ 1.14
SMC4-222ENST00000490207 LPXNO60711 386 aa22.2■■□□□ 1.14
SMC4-222ENST00000490207 CRYBB1P53674 252 aaPredicted RBP22.2■■□□□ 1.14
SMC4-222ENST00000490207 TBC1D8BQ0IIM8 1120 aa22.2■■□□□ 1.14
SMC4-222ENST00000490207 NFX1Q12986 1120 aaKnown RBP22.2■■□□□ 1.14
SMC4-222ENST00000490207 FBXO22Q8NEZ5 403 aa22.2■■□□□ 1.14
SMC4-222ENST00000490207 SAMD11Q96NU1 681 aa22.2■■□□□ 1.14
SMC4-222ENST00000490207 TSPYL2Q9H2G4 693 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms