RNA–Protein interactions for RNA: ENST00000490127.5

RBM3-209, Transcript of RNA binding motif protein 3, human

TSL 5

Gene RBM3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM3-209	ENST00000490127	RRN3P2	A6NIE6	340 aa		12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	RPLP2	P05387	115 aa	Known RBP	12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	NEK4	P51957	841 aa		12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	IGBP1	P78318	339 aa		12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	MRPS6	P82932	125 aa	Known RBP	12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	SMAD2	Q15796	467 aa	Known RBP	12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	TSHZ1	Q6ZSZ6	1077 aa		12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	PLA2G4D	Q86XP0	818 aa		12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	DAGLB	Q8NCG7	672 aa		12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	GTF3C6	Q969F1	213 aa		12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	PPP2R3C	Q969Q6	453 aa		12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	ZNF689	Q96CS4	500 aa	Predicted RBP	12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	AIFM3	Q96NN9	605 aa		12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	POP1	Q99575	1024 aa	Known RBP	12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	PCDHA4	Q9UN74	947 aa		12.81	□□□□□ -0.36
RBM3-209	ENST00000490127	MBLAC1	A4D2B0	266 aa	Predicted RBP	12.8	□□□□□ -0.36
RBM3-209	ENST00000490127		M0QZ92	97 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	MBTPS2	O43462	519 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	DGKI	O75912	1065 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	CSPG5	O95196	566 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	LARGE1	O95461	756 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	LINC00271	P0C7V0	271 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	IRS1	P35568	1242 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	ACTR2	P61160	394 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	DLX2	Q07687	328 aa	Predicted RBP	12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	SMAD4	Q13485	552 aa	Known RBP	12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	ME3	Q16798	604 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	NAALADL2	Q58DX5	795 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	MARCH8	Q5T0T0	291 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	IER5	Q5VY09	327 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	GALNT17	Q6IS24	598 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	BLID	Q8IZY5	108 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	TNPO1	Q92973	898 aa	Known RBP	12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	FTHL17	Q9BXU8	183 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	C22orf23	Q9BZE7	217 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	FAM49A	Q9H0Q0	323 aa	Predicted RBP	12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	KCNH6	Q9H252	994 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	RC3H2	Q9HBD1	1191 aa	Known RBP	12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	ALG13	Q9NP73	1137 aa	Known RBP	12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	CD207	Q9UJ71	328 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	PLAGL2	Q9UPG8	496 aa		12.8	□□□□□ -0.36
RBM3-209	ENST00000490127	TTC3	P53804	2025 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	DDX39A	O00148	427 aa	Known RBP	12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	IPO5	O00410	1097 aa	Known RBP	12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	CTDNEP1	O95476	244 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	MMP1	P03956	469 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	STAG3L1	P0CL83	205 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	INSRR	P14616	1297 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	XBP1	P17861	261 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	CD52	P31358	61 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	CIITA	P33076	1130 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	GTF2F1	P35269	517 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	ADAM15	Q13444	863 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	NPY5R	Q15761	445 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	PRR16	Q569H4	304 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	CMTR2	Q8IYT2	770 aa	Known RBP	12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	WASF1	Q92558	559 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	P2RX5	Q93086	422 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	MFSD14A	Q96MC6	490 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	PCYT2	Q99447	389 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	ZNF577	Q9BSK1	485 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	AZI2	Q9H6S1	392 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	AGO3	Q9H9G7	860 aa	Known RBP	12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	MRPL42	Q9Y6G3	142 aa	Known RBP	12.79	□□□□□ -0.36
RBM3-209	ENST00000490127	SQOR	Q9Y6N5	450 aa		12.79	□□□□□ -0.36
RBM3-209	ENST00000490127		M0R2N6	131 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	LINC01565	O15544	149 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	CCNE2	O96020	404 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	NDUFV1	P49821	464 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	MRE11	P49959	708 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	RNF135	Q8IUD6	432 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	NPAS4	Q8IUM7	802 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	NECAB1	Q8N987	351 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	SPPL3	Q8TCT6	385 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	TBCK	Q8TEA7	893 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	LENG9	Q96B70	501 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	FBXL18	Q96ME1	805 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	PHF20	Q9BVI0	1012 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	TBC1D22B	Q9NU19	505 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	ORC3	Q9UBD5	711 aa	Predicted RBP	12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	TCEAL9	Q9UHQ7	104 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	MUTYH	Q9UIF7	546 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	LRFN2	Q9ULH4	789 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	KCNJ14	Q9UNX9	436 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	TRPC6	Q9Y210	931 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	TRPV2	Q9Y5S1	764 aa		12.78	□□□□□ -0.36
RBM3-209	ENST00000490127	DHX15	O43143	795 aa	Known RBP	12.77	□□□□□ -0.37
RBM3-209	ENST00000490127	DTNB	O60941	627 aa		12.77	□□□□□ -0.37
RBM3-209	ENST00000490127	TBX10	O75333	385 aa		12.77	□□□□□ -0.37
RBM3-209	ENST00000490127	ATG7	O95352	703 aa		12.77	□□□□□ -0.37
RBM3-209	ENST00000490127	ITGB1	P05556	798 aa		12.77	□□□□□ -0.37
RBM3-209	ENST00000490127	USP11	P51784	963 aa		12.77	□□□□□ -0.37
RBM3-209	ENST00000490127	NHLH1	Q02575	133 aa		12.77	□□□□□ -0.37
RBM3-209	ENST00000490127	TMEM62	Q0P6H9	643 aa		12.77	□□□□□ -0.37
RBM3-209	ENST00000490127	PAK2	Q13177	524 aa		12.77	□□□□□ -0.37
RBM3-209	ENST00000490127	CAMK1	Q14012	370 aa		12.77	□□□□□ -0.37
RBM3-209	ENST00000490127	NONO	Q15233	471 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
RBM3-209	ENST00000490127	PAN2	Q504Q3	1202 aa	Known RBP	12.77	□□□□□ -0.37
RBM3-209	ENST00000490127	HERC4	Q5GLZ8	1057 aa	Predicted RBP	12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms