RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 ADAM17P78536 824 aa13.26□□□□□ -0.29
GGPS1-207ENST00000489692 SETQ01105 290 aaPredicted RBP13.26□□□□□ -0.29
GGPS1-207ENST00000489692 TMEM62Q0P6H9 643 aa13.26□□□□□ -0.29
GGPS1-207ENST00000489692 GRB10Q13322 594 aa13.26□□□□□ -0.29
GGPS1-207ENST00000489692 HS1BP3Q53T59 392 aa13.26□□□□□ -0.29
GGPS1-207ENST00000489692 IER5Q5VY09 327 aa13.26□□□□□ -0.29
GGPS1-207ENST00000489692 KRT40Q6A162 431 aa13.26□□□□□ -0.29
GGPS1-207ENST00000489692 NIPA1Q7RTP0 329 aa13.26□□□□□ -0.29
GGPS1-207ENST00000489692 PLPPR4Q7Z2D5 763 aa13.26□□□□□ -0.29
GGPS1-207ENST00000489692 SPRED2Q7Z698 418 aa13.26□□□□□ -0.29
GGPS1-207ENST00000489692 ZNF302Q9NR11 478 aa13.26□□□□□ -0.29
GGPS1-207ENST00000489692 DDX19AQ9NUU7 478 aaKnown RBP13.26□□□□□ -0.29
GGPS1-207ENST00000489692 GINS2Q9Y248 185 aa13.26□□□□□ -0.29
GGPS1-207ENST00000489692 STK36Q9NRP7 1315 aa13.25□□□□□ -0.29
GGPS1-207ENST00000489692 LINC01553A4QN01 128 aa13.25□□□□□ -0.29
GGPS1-207ENST00000489692 ADAMTS3O15072 1205 aa13.25□□□□□ -0.29
GGPS1-207ENST00000489692 FDPSP14324 419 aaKnown RBP13.25□□□□□ -0.29
GGPS1-207ENST00000489692 MRPS5P82675 430 aaKnown RBP13.25□□□□□ -0.29
GGPS1-207ENST00000489692 MRPS6P82932 125 aaKnown RBP13.25□□□□□ -0.29
GGPS1-207ENST00000489692 FAM26DQ5JW98 314 aa13.25□□□□□ -0.29
GGPS1-207ENST00000489692 SWSAP1Q6NVH7 229 aa13.25□□□□□ -0.29
GGPS1-207ENST00000489692 ATXN2LQ8WWM7 1075 aaKnown RBP13.25□□□□□ -0.29
GGPS1-207ENST00000489692 OSBPL7Q9BZF2 842 aa13.25□□□□□ -0.29
GGPS1-207ENST00000489692 TBC1D22BQ9NU19 505 aa13.25□□□□□ -0.29
GGPS1-207ENST00000489692 MTCH2Q9Y6C9 303 aa13.25□□□□□ -0.29
GGPS1-207ENST00000489692 KIAA1217Q5T5P2 1943 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 MBLAC1A4D2B0 266 aaPredicted RBP13.24□□□□□ -0.29
GGPS1-207ENST00000489692 CHMP2AO43633 222 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 HBP1O60381 514 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 DTNBO60941 627 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 DEXIO95424 95 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 CCNE2O96020 404 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 RPLP2P05387 115 aaKnown RBP13.24□□□□□ -0.29
GGPS1-207ENST00000489692 PSAPP07602 524 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 CYP3A4P08684 503 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 SLC26A2P50443 739 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 LPIN1Q14693 890 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 NTRK3Q16288 839 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 MARCH8Q5T0T0 291 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 BRAPQ7Z569 592 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 FBXO22Q8NEZ5 403 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 TRIM44Q96DX7 344 aaPredicted RBP13.24□□□□□ -0.29
GGPS1-207ENST00000489692 FUCA2Q9BTY2 467 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 RCOR1Q9UKL0 485 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 TRPV2Q9Y5S1 764 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 EYSQ5T1H1 3165 aa13.24□□□□□ -0.29
GGPS1-207ENST00000489692 IGLV3-22A0A075B6J6 115 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 GOLGA6L4A6NEF3 574 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 GAS7O60861 476 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 KLRC1P26715 233 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 CD52P31358 61 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 ERVK-21P61565 698 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 KRT76Q01546 638 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 PAK2Q13177 524 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 AAK1Q2M2I8 961 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 FBXO47Q5MNV8 452 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 ZNF746Q6NUN9 644 aaPredicted RBP13.23□□□□□ -0.29
GGPS1-207ENST00000489692 FAM173BQ6P4H8 233 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 MTHFD1LQ6UB35 978 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 ABHD15Q6UXT9 468 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 RBM43Q6ZSC3 357 aaKnown RBP13.23□□□□□ -0.29
GGPS1-207ENST00000489692 TSHZ1Q6ZSZ6 1077 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 RPAINQ86UA6 219 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 CCDC60Q8IWA6 550 aaPredicted RBP13.23□□□□□ -0.29
GGPS1-207ENST00000489692 METTL13Q8N6R0 699 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 ATP8B4Q8TF62 1192 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 TOP1MTQ969P6 601 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 C8orf76Q96K31 380 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 ASB2Q96Q27 587 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 PPP1R16BQ96T49 567 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 C17orf80Q9BSJ5 609 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 NUP62CLQ9H1M0 184 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 SH3GLB2Q9NR46 395 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 ORC3Q9UBD5 711 aaPredicted RBP13.23□□□□□ -0.29
GGPS1-207ENST00000489692 PCDHA2Q9Y5H9 948 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 PCDHA10Q9Y5I2 948 aa13.23□□□□□ -0.29
GGPS1-207ENST00000489692 CHD9Q3L8U1 2897 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 CDH23Q9H251 3354 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-207ENST00000489692 ATG7O95352 703 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 XBP1P17861 261 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 MGAT3Q09327 533 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 NFX1Q12986 1120 aaKnown RBP13.22□□□□□ -0.29
GGPS1-207ENST00000489692 ZNF484Q5JVG2 852 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 SMAP1Q8IYB5 467 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-207ENST00000489692 BLIDQ8IZY5 108 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 FBXO18Q8NFZ0 1043 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 TBCKQ8TEA7 893 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 CLSTN2Q9H4D0 955 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 SUGCTQ9HAC7 445 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 TFIP11Q9UBB9 837 aaKnown RBP13.22□□□□□ -0.29
GGPS1-207ENST00000489692 GABBR1Q9UBS5 961 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 PCDHA4Q9UN74 947 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 UNC80Q8N2C7 3258 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 SCN5AQ14524 2016 aa13.22□□□□□ -0.29
GGPS1-207ENST00000489692 PRUNE2Q8WUY3 3088 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 SMIM35A0A1B0GVV1 85 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 WDR64B1ANS9 1081 aa13.21□□□□□ -0.29
GGPS1-207ENST00000489692 DHX15O43143 795 aaKnown RBP13.21□□□□□ -0.29
GGPS1-207ENST00000489692 CSPG5O95196 566 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms