RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 SH3RF1Q7Z6J0 888 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 IQUBQ8NA54 791 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 ANKLE1Q8NAG6 615 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 SLC43A3Q8NBI5 491 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 LARP4BQ92615 738 aaKnown RBP12.17□□□□□ -0.46
TFF3-203ENST00000489676 DHX58Q96C10 678 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 MTRQ99707 1265 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 PYM1Q9BRP8 204 aaKnown RBP12.17□□□□□ -0.46
TFF3-203ENST00000489676 CUEDC2Q9H467 287 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 KBTBD4Q9NVX7 518 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 SEPT9Q9UHD8 586 aaPredicted RBP12.17□□□□□ -0.46
TFF3-203ENST00000489676 COL1A2P08123 1366 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 ZNF202O95125 648 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 MYCNP04198 464 aaPredicted RBP12.16□□□□□ -0.46
TFF3-203ENST00000489676 SLFN14P0C7P3 912 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 SMIM10L2AP0DMW4 78 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 SMIM10L2BP0DMW5 78 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 INSRRP14616 1297 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 ADAM17P78536 824 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 HIC1Q14526 733 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 NBPF20Q3BBV1 942 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 LONRF3Q496Y0 759 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 TPRNQ4KMQ1 711 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 MARCH8Q5T0T0 291 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 KRBA2Q6ZNG9 492 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 UBE2Q1Q7Z7E8 422 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 SESTD1Q86VW0 696 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 CKAP2LQ8IYA6 745 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 SYT2Q8N9I0 419 aaPredicted RBP12.16□□□□□ -0.46
TFF3-203ENST00000489676 RASSF8Q8NHQ8 419 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 DIS3LQ8TF46 1054 aaKnown RBP12.16□□□□□ -0.46
TFF3-203ENST00000489676 LMBR1Q8WVP7 490 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 SH2D3AQ9BRG2 576 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 RUSC1Q9BVN2 902 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 PANK2Q9BZ23 570 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 BHMT2Q9H2M3 363 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 MAGEF1Q9HAY2 307 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 CYP26B1Q9NR63 512 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 USP25Q9UHP3 1055 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 DNM3Q9UQ16 869 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 TRPC6Q9Y210 931 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 PPME1Q9Y570 386 aa12.16□□□□□ -0.46
TFF3-203ENST00000489676 NRCAMQ92823 1304 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 MBLAC1A4D2B0 266 aaPredicted RBP12.15□□□□□ -0.46
TFF3-203ENST00000489676 C22orf31O95567 290 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 PLA2G4BP0C869 781 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 CYP11B2P19099 503 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 PPFIA1Q13136 1202 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 MCM6Q14566 821 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 NFKBIBQ15653 356 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 GRIK4Q16099 956 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 MTERF2Q49AM1 385 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 XKR9Q5GH70 373 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 OTUD6AQ7L8S5 288 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 LINC01465Q8N7H1 131 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 PPP1R13LQ8WUF5 828 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 TRAPPC12Q8WVT3 735 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 CEP170P1Q96L14 293 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 TIGD1Q96MW7 591 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 CTAGE1Q96RT6 745 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 TNMDQ9H2S6 317 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 DHX33Q9H6R0 707 aaKnown RBP12.15□□□□□ -0.46
TFF3-203ENST00000489676 XPNPEP1Q9NQW7 623 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 PDLIM7Q9NR12 457 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 NRBP2Q9NSY0 501 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 DACT1Q9NYF0 836 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 GTF2IRD1Q9UHL9 959 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 SERTAD1Q9UHV2 236 aa12.15□□□□□ -0.46
TFF3-203ENST00000489676 TRIP12Q14669 1992 aaPredicted RBP12.15□□□□□ -0.46
TFF3-203ENST00000489676 IGKV6-21A0A0C4DH24 114 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 A0A0U1RQG5 324 aaPredicted RBP12.14□□□□□ -0.47
TFF3-203ENST00000489676 ARHGEF35A5YM69 484 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 MBD3O95983 291 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 TFRCP02786 760 aaKnown RBP12.14□□□□□ -0.47
TFF3-203ENST00000489676 MAPK7Q13164 816 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 ITGA7Q13683 1181 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 ARSHQ5FYA8 562 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 ZNF484Q5JVG2 852 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 RINT1Q6NUQ1 792 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 CNNM4Q6P4Q7 775 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 NFRKBQ6P4R8 1299 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 C1orf186Q6ZWK4 172 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 TRMT1LQ7Z2T5 733 aaKnown RBP12.14□□□□□ -0.47
TFF3-203ENST00000489676 GPBP1Q86WP2 473 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 GLT1D1Q96MS3 346 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 STARD7Q9NQZ5 370 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 HDAC6Q9UBN7 1215 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 KAT6AQ92794 2004 aa12.14□□□□□ -0.47
TFF3-203ENST00000489676 ARVCFO00192 962 aa12.13□□□□□ -0.47
TFF3-203ENST00000489676 USO1O60763 962 aaKnown RBP12.13□□□□□ -0.47
TFF3-203ENST00000489676 MAFO75444 373 aaPredicted RBP12.13□□□□□ -0.47
TFF3-203ENST00000489676 PTMSP20962 102 aa12.13□□□□□ -0.47
TFF3-203ENST00000489676 GUCY2CP25092 1073 aa12.13□□□□□ -0.47
TFF3-203ENST00000489676 RFC5P40937 340 aa12.13□□□□□ -0.47
TFF3-203ENST00000489676 CDK7P50613 346 aa12.13□□□□□ -0.47
TFF3-203ENST00000489676 MDM2Q00987 491 aaPredicted RBP12.13□□□□□ -0.47
TFF3-203ENST00000489676 PTPN11Q06124 597 aaPredicted RBP12.13□□□□□ -0.47
TFF3-203ENST00000489676 EMC2Q15006 297 aa12.13□□□□□ -0.47
TFF3-203ENST00000489676 SNX17Q15036 470 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms