RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 RPA1P27694 616 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 CASP14P31944 242 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 GGCXP38435 758 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 MMP16P51512 607 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 ADKP55263 362 aaKnown RBP9.37□□□□□ -0.91
VTI1A-207ENST00000489357 MARSP56192 900 aaKnown RBP9.37□□□□□ -0.91
VTI1A-207ENST00000489357 GHRHRQ02643 423 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 PPP2R3AQ06190 1150 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 STK4Q13043 487 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 MEA1Q16626 185 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 UBE2SQ16763 222 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 EDRF1Q3B7T1 1238 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 HSP90AA4PQ58FG1 418 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 SYT10Q6XYQ8 523 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 FASTKD5Q7L8L6 764 aaKnown RBP9.37□□□□□ -0.91
VTI1A-207ENST00000489357 CCDC170Q8IYT3 715 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 TXLNBQ8N3L3 684 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 EHBP1Q8NDI1 1231 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 ETNPPLQ8TBG4 499 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 ZNF592Q92610 1267 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 LPAR1Q92633 364 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 NUP88Q99567 741 aaPredicted RBP9.37□□□□□ -0.91
VTI1A-207ENST00000489357 FEZ1Q99689 392 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 POLR3CQ9BUI4 534 aaPredicted RBP9.37□□□□□ -0.91
VTI1A-207ENST00000489357 KIAA1683Q9H0B3 1180 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 VCPKMTQ9H867 229 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 AS3MTQ9HBK9 375 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 KCND2Q9NZV8 630 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 FEM1BQ9UK73 627 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 MRPL11Q9Y3B7 192 aaKnown RBP9.37□□□□□ -0.91
VTI1A-207ENST00000489357 EFCAB8A8MWE9 144 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 TBC1D8O95759 1140 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 HNRNPH3P31942 346 aaKnown RBP9.36□□□□□ -0.91
VTI1A-207ENST00000489357 KRT9P35527 623 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 CCT6AP40227 531 aaKnown RBP9.36□□□□□ -0.91
VTI1A-207ENST00000489357 KRT83P78385 493 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 ZBED6P86452 979 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 FKBP3Q00688 224 aaKnown RBP9.36□□□□□ -0.91
VTI1A-207ENST00000489357 SETQ01105 290 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-207ENST00000489357 SPIRE1Q08AE8 756 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 NCBP1Q09161 790 aaKnown RBP9.36□□□□□ -0.91
VTI1A-207ENST00000489357 IKQ13123 557 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-207ENST00000489357 MCM6Q14566 821 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 MAN2A1Q16706 1144 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 ANKRD40Q6AI12 368 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 MYOCDQ8IZQ8 938 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 KIAA0895Q8NCT3 520 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 NEK9Q8TD19 979 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 ACER1Q8TDN7 264 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 LRRC15Q8TF66 581 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 DNAJC19Q96DA6 116 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 CNOT6LQ96LI5 555 aaKnown RBP9.36□□□□□ -0.91
VTI1A-207ENST00000489357 VPS16Q9H269 839 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 RANBP17Q9H2T7 1088 aaKnown RBP9.36□□□□□ -0.91
VTI1A-207ENST00000489357 TAB2Q9NYJ8 693 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 PRR12Q9ULL5 1215 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 AGTPBP1Q9UPW5 1226 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 MGAMO43451 1857 aa9.36□□□□□ -0.91
VTI1A-207ENST00000489357 TRIM49BA6NDI0 452 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 USP17L15C9J2P7 530 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 USP17L13C9JLJ4 530 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 USP17L11C9JVI0 530 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 USP17L18D6R9N7 530 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 USP17L22D6RA61 530 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 USP17L17D6RBQ6 530 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 USP17L19D6RCP7 530 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 USP17L20D6RJB6 530 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 IPO7O95373 1038 aaKnown RBP9.35□□□□□ -0.91
VTI1A-207ENST00000489357 TUBBP07437 444 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 CASQ1P31415 396 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 CYLC1P35663 651 aaPredicted RBP9.35□□□□□ -0.91
VTI1A-207ENST00000489357 MTIF2P46199 727 aaKnown RBP9.35□□□□□ -0.91
VTI1A-207ENST00000489357 FXR1P51114 621 aaKnown RBP eCLIP9.35□□□□□ -0.91
VTI1A-207ENST00000489357 PMS1P54277 932 aaKnown RBP9.35□□□□□ -0.91
VTI1A-207ENST00000489357 TBC1D8BQ0IIM8 1120 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 USP17L24Q0WX57 530 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 ZCWPW2Q504Y3 356 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 KIAA1755Q5JYT7 1200 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 FAM26FQ5R3K3 315 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 USP17L6PQ6QN14 398 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 C17orf99Q6UX52 265 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 NIPA1Q7RTP0 329 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 ZC3H3Q8IXZ2 948 aaKnown RBP9.35□□□□□ -0.91
VTI1A-207ENST00000489357 SYT2Q8N9I0 419 aaPredicted RBP9.35□□□□□ -0.91
VTI1A-207ENST00000489357 NOC4LQ9BVI4 516 aaKnown RBP9.35□□□□□ -0.91
VTI1A-207ENST00000489357 WDR11Q9BZH6 1224 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 TTYH3Q9C0H2 523 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 HAUS4Q9H6D7 363 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 TUFT1Q9NNX1 390 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 PANK4Q9NVE7 773 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 FAM184BQ9ULE4 1060 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 DNM3Q9UQ16 869 aa9.35□□□□□ -0.91
VTI1A-207ENST00000489357 GCOM1H8Y6P7 765 aaPredicted RBP9.34□□□□□ -0.91
VTI1A-207ENST00000489357 GPR25O00155 361 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 PDHXO00330 501 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 TLR2O60603 784 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 PLA2G4BP0C869 781 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 POLR2MP0CAP2 368 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 BCRP11274 1271 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 GAP43P17677 238 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms