RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 FAM205CA6NFA0 338 aa28.21■■■□□ 2.11
HMGN1-217ENST00000489072 C22orf31O95567 290 aa28.21■■■□□ 2.11
HMGN1-217ENST00000489072 CD52P31358 61 aa28.21■■■□□ 2.11
HMGN1-217ENST00000489072 SFNP31947 248 aa28.21■■■□□ 2.11
HMGN1-217ENST00000489072 JAK3P52333 1124 aa28.21■■■□□ 2.11
HMGN1-217ENST00000489072 NEK8Q86SG6 692 aa28.21■■■□□ 2.11
HMGN1-217ENST00000489072 NME8Q8N427 588 aa28.21■■■□□ 2.11
HMGN1-217ENST00000489072 PPM1EQ8WY54 764 aa28.21■■■□□ 2.11
HMGN1-217ENST00000489072 CELF4Q9BZC1 486 aaKnown RBP28.21■■■□□ 2.11
HMGN1-217ENST00000489072 INSL6Q9Y581 213 aa28.21■■■□□ 2.11
HMGN1-217ENST00000489072 TTC3P53804 2025 aa28.21■■■□□ 2.11
HMGN1-217ENST00000489072 KDM3AQ9Y4C1 1321 aa28.2■■■□□ 2.11
HMGN1-217ENST00000489072 NR5A1Q13285 461 aa28.2■■■□□ 2.1
HMGN1-217ENST00000489072 TNFRSF25Q93038 417 aa28.2■■■□□ 2.1
HMGN1-217ENST00000489072 LIMCH1Q9UPQ0 1083 aa28.2■■■□□ 2.1
HMGN1-217ENST00000489072 SQORQ9Y6N5 450 aa28.2■■■□□ 2.1
HMGN1-217ENST00000489072 M0QZ92 97 aa28.19■■■□□ 2.1
HMGN1-217ENST00000489072 UPP2O95045 317 aa28.19■■■□□ 2.1
HMGN1-217ENST00000489072 PRKCEQ02156 737 aa28.19■■■□□ 2.1
HMGN1-217ENST00000489072 PPP4R3AQ6IN85 833 aa28.19■■■□□ 2.1
HMGN1-217ENST00000489072 MIER3Q7Z3K6 550 aa28.19■■■□□ 2.1
HMGN1-217ENST00000489072 SP7Q8TDD2 431 aaPredicted RBP28.19■■■□□ 2.1
HMGN1-217ENST00000489072 FAM167AQ96KS9 214 aa28.19■■■□□ 2.1
HMGN1-217ENST00000489072 ENPP3O14638 875 aa28.18■■■□□ 2.1
HMGN1-217ENST00000489072 OATP04181 439 aa28.18■■■□□ 2.1
HMGN1-217ENST00000489072 KRT2P35908 639 aa28.18■■■□□ 2.1
HMGN1-217ENST00000489072 FOSBP53539 338 aa28.18■■■□□ 2.1
HMGN1-217ENST00000489072 CCDC85BQ15834 202 aaPredicted RBP28.18■■■□□ 2.1
HMGN1-217ENST00000489072 RDM1Q8NG50 284 aa28.18■■■□□ 2.1
HMGN1-217ENST00000489072 LINC01599Q8WXQ3 324 aa28.18■■■□□ 2.1
HMGN1-217ENST00000489072 CDHR5Q9HBB8 845 aa28.18■■■□□ 2.1
HMGN1-217ENST00000489072 KCNMB3Q9NPA1 279 aa28.18■■■□□ 2.1
HMGN1-217ENST00000489072 PRDM6Q9NQX0 595 aa28.18■■■□□ 2.1
HMGN1-217ENST00000489072 GCFC2P16383 781 aaKnown RBP28.17■■■□□ 2.1
HMGN1-217ENST00000489072 ERVK-21P61565 698 aa28.17■■■□□ 2.1
HMGN1-217ENST00000489072 TGS1Q96RS0 853 aaKnown RBP28.17■■■□□ 2.1
HMGN1-217ENST00000489072 MTUS1Q9ULD2 1270 aa28.17■■■□□ 2.1
HMGN1-217ENST00000489072 PADI3Q9ULW8 664 aa28.17■■■□□ 2.1
HMGN1-217ENST00000489072 CEP131Q9UPN4 1083 aa28.17■■■□□ 2.1
HMGN1-217ENST00000489072 MTCH2Q9Y6C9 303 aa28.17■■■□□ 2.1
HMGN1-217ENST00000489072 VCANP13611 3396 aa28.16■■■□□ 2.1
HMGN1-217ENST00000489072 CCNT1O60563 726 aaKnown RBP28.16■■■□□ 2.1
HMGN1-217ENST00000489072 LPXNO60711 386 aa28.16■■■□□ 2.1
HMGN1-217ENST00000489072 MMP1P03956 469 aa28.16■■■□□ 2.1
HMGN1-217ENST00000489072 POU3F3P20264 500 aaPredicted RBP28.16■■■□□ 2.1
HMGN1-217ENST00000489072 GRB10Q13322 594 aa28.16■■■□□ 2.1
HMGN1-217ENST00000489072 KRT40Q6A162 431 aa28.16■■■□□ 2.1
HMGN1-217ENST00000489072 RTN4RL1Q86UN2 441 aaPredicted RBP28.16■■■□□ 2.1
HMGN1-217ENST00000489072 CCDC83Q8IWF9 413 aa28.16■■■□□ 2.1
HMGN1-217ENST00000489072 YME1L1Q96TA2 773 aa28.16■■■□□ 2.1
HMGN1-217ENST00000489072 VAV3Q9UKW4 847 aa28.16■■■□□ 2.1
HMGN1-217ENST00000489072 COL4A6Q14031 1691 aa28.16■■■□□ 2.1
HMGN1-217ENST00000489072 NLRC5Q86WI3 1866 aa28.15■■■□□ 2.1
HMGN1-217ENST00000489072 TMEM266Q2M3C6 531 aa28.15■■■□□ 2.1
HMGN1-217ENST00000489072 MICALL1Q8N3F8 863 aa28.15■■■□□ 2.1
HMGN1-217ENST00000489072 METTL13Q8N6R0 699 aa28.15■■■□□ 2.1
HMGN1-217ENST00000489072 LINC01465Q8N7H1 131 aa28.15■■■□□ 2.1
HMGN1-217ENST00000489072 GDPD5Q8WTR4 605 aa28.15■■■□□ 2.1
HMGN1-217ENST00000489072 TMEM40Q8WWA1 233 aa28.15■■■□□ 2.1
HMGN1-217ENST00000489072 HAS1Q92839 578 aa28.15■■■□□ 2.1
HMGN1-217ENST00000489072 FAM20AQ96MK3 541 aa28.15■■■□□ 2.1
HMGN1-217ENST00000489072 PPP1R16BQ96T49 567 aa28.15■■■□□ 2.1
HMGN1-217ENST00000489072 BRMS1Q9HCU9 246 aa28.15■■■□□ 2.1
HMGN1-217ENST00000489072 NRBP2Q9NSY0 501 aa28.15■■■□□ 2.1
HMGN1-217ENST00000489072 GINS2Q9Y248 185 aa28.15■■■□□ 2.1
HMGN1-217ENST00000489072 BTBD18B2RXH4 712 aa28.14■■■□□ 2.1
HMGN1-217ENST00000489072 EML1O00423 815 aa28.14■■■□□ 2.1
HMGN1-217ENST00000489072 STBD1O95210 358 aa28.14■■■□□ 2.1
HMGN1-217ENST00000489072 VTNP04004 478 aa28.14■■■□□ 2.1
HMGN1-217ENST00000489072 RBM25P49756 843 aaKnown RBP28.14■■■□□ 2.1
HMGN1-217ENST00000489072 CLCN3P51790 818 aa28.14■■■□□ 2.1
HMGN1-217ENST00000489072 PAK2Q13177 524 aa28.14■■■□□ 2.1
HMGN1-217ENST00000489072 POTEDQ86YR6 584 aa28.14■■■□□ 2.1
HMGN1-217ENST00000489072 C17orf80Q9BSJ5 609 aa28.14■■■□□ 2.1
HMGN1-217ENST00000489072 NOC2LQ9Y3T9 749 aaKnown RBP28.14■■■□□ 2.1
HMGN1-217ENST00000489072 MAGEB2O15479 319 aa28.13■■■□□ 2.09
HMGN1-217ENST00000489072 PPP2R5CQ13362 524 aa28.13■■■□□ 2.09
HMGN1-217ENST00000489072 TARBP2Q15633 366 aaKnown RBP28.13■■■□□ 2.09
HMGN1-217ENST00000489072 KIZQ2M2Z5 673 aa28.13■■■□□ 2.09
HMGN1-217ENST00000489072 DIS3L2Q8IYB7 885 aaKnown RBP28.13■■■□□ 2.09
HMGN1-217ENST00000489072 NAP1L4Q99733 375 aaKnown RBP28.13■■■□□ 2.09
HMGN1-217ENST00000489072 TMX1Q9H3N1 280 aa28.13■■■□□ 2.09
HMGN1-217ENST00000489072 SUGCTQ9HAC7 445 aa28.13■■■□□ 2.09
HMGN1-217ENST00000489072 TMEM150BA6NC51 233 aa28.12■■■□□ 2.09
HMGN1-217ENST00000489072 GPR32O75388 356 aa28.12■■■□□ 2.09
HMGN1-217ENST00000489072 EFCAB12Q6NXP0 572 aa28.12■■■□□ 2.09
HMGN1-217ENST00000489072 LRRC71Q8N4P6 559 aa28.12■■■□□ 2.09
HMGN1-217ENST00000489072 BANK1Q8NDB2 785 aa28.12■■■□□ 2.09
HMGN1-217ENST00000489072 FTHL17Q9BXU8 183 aa28.12■■■□□ 2.09
HMGN1-217ENST00000489072 ERVK-5Q9HDB9 667 aa28.12■■■□□ 2.09
HMGN1-217ENST00000489072 SPTBN5Q9NRC6 3674 aaKnown RBP28.12■■■□□ 2.09
HMGN1-217ENST00000489072 TBX3O15119 743 aa28.11■■■□□ 2.09
HMGN1-217ENST00000489072 GTPBP6O43824 516 aaPredicted RBP28.11■■■□□ 2.09
HMGN1-217ENST00000489072 TRIM29Q14134 588 aa28.11■■■□□ 2.09
HMGN1-217ENST00000489072 XKR3Q5GH77 459 aa28.11■■■□□ 2.09
HMGN1-217ENST00000489072 CEP89Q96ST8 783 aa28.11■■■□□ 2.09
HMGN1-217ENST00000489072 OSMRQ99650 979 aa28.11■■■□□ 2.09
HMGN1-217ENST00000489072 NIFKQ9BYG3 293 aaKnown RBP28.11■■■□□ 2.09
HMGN1-217ENST00000489072 TSPYL2Q9H2G4 693 aaPredicted RBP28.11■■■□□ 2.09
HMGN1-217ENST00000489072 RC3H2Q9HBD1 1191 aaKnown RBP28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms