RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 DYRK3O43781 588 aa9.69□□□□□ -0.86
TRAPPC12-221ENST00000489032 MAST3O60307 1309 aa9.69□□□□□ -0.86
TRAPPC12-221ENST00000489032 F13BP05160 661 aa9.69□□□□□ -0.86
TRAPPC12-221ENST00000489032 ACRP10323 421 aa9.69□□□□□ -0.86
TRAPPC12-221ENST00000489032 RANBP2P49792 3224 aaKnown RBP9.69□□□□□ -0.86
TRAPPC12-221ENST00000489032 RNF4P78317 190 aa9.69□□□□□ -0.86
TRAPPC12-221ENST00000489032 ARHGEF6Q15052 776 aa9.69□□□□□ -0.86
TRAPPC12-221ENST00000489032 SFRP5Q5T4F7 317 aa9.69□□□□□ -0.86
TRAPPC12-221ENST00000489032 PRAMEF18Q5VWM3 479 aa9.69□□□□□ -0.86
TRAPPC12-221ENST00000489032 ZNF765Q7L2R6 523 aa9.69□□□□□ -0.86
TRAPPC12-221ENST00000489032 ARMC9Q7Z3E5 817 aa9.69□□□□□ -0.86
TRAPPC12-221ENST00000489032 EAF2Q96CJ1 260 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC12-221ENST00000489032 SUGT1Q9Y2Z0 365 aa9.69□□□□□ -0.86
TRAPPC12-221ENST00000489032 PSME4Q14997 1843 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 ARAP2Q8WZ64 1704 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 F8W031 263 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 UBOX5O94941 541 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 EOMESO95936 686 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 SP3Q02447 781 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 CPSF6Q16630 551 aaKnown RBP eCLIP9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 ANKRD45Q5TZF3 282 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 SPTY2D1Q68D10 685 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 OTUD7BQ6GQQ9 843 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 GATA6Q92908 595 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 KREMEN1Q96MU8 473 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 MXD3Q9BW11 206 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 TNKS2Q9H2K2 1166 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 PRO3102Q9H379 93 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 MYOZ2Q9NPC6 264 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 DBNLQ9UJU6 430 aaKnown RBP9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 SCAF8Q9UPN6 1271 aaKnown RBP9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 MAPK8IP1Q9UQF2 711 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 SCN9AQ15858 1988 aa9.68□□□□□ -0.86
TRAPPC12-221ENST00000489032 PDS5AQ29RF7 1337 aaKnown RBP9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 SMARCA5O60264 1052 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 DDAH1O94760 285 aa9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 FURINP09958 794 aa9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 RBM5P52756 815 aaKnown RBP eCLIP9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 RASGRF1Q13972 1273 aa9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 DLGAP5Q15398 846 aa9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 ZYXQ15942 572 aaKnown RBP9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 GNPTABQ3T906 1256 aa9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 SPATA5Q8NB90 893 aa9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 DNAJB8Q8NHS0 232 aa9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 PPP1R13LQ8WUF5 828 aa9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 ZNF512BQ96KM6 892 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 HTATIP2Q9BUP3 242 aa9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 MKRN2Q9H000 416 aaKnown RBP9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 SEMA6BQ9H3T3 888 aa9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 LRRC4CQ9HCJ2 640 aa9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 ABCF2Q9UG63 623 aa9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 KCNH3Q9ULD8 1083 aa9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 NR2E3Q9Y5X4 410 aa9.67□□□□□ -0.86
TRAPPC12-221ENST00000489032 MYH13Q9UKX3 1938 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 SALL1Q9NSC2 1324 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 IGF2BP3O00425 579 aaKnown RBP eCLIP9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 MYO1BO43795 1136 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 CBX7O95931 251 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 ZBTB48P10074 688 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 SLC7A5Q01650 507 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 CRHR2Q13324 411 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 PRKG1Q13976 671 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 RAB33AQ14088 237 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 VHLLQ6RSH7 139 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 DZIP1Q86YF9 867 aaKnown RBP9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 CCDC144CPQ8IYA2 1237 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 CERS5Q8N5B7 392 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 RNF141Q8WVD5 230 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 ASPNQ9BXN1 380 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 HMG20BQ9P0W2 317 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 SUCOQ9UBS9 1254 aaKnown RBP9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 PTCH2Q9Y6C5 1203 aa9.66□□□□□ -0.86
TRAPPC12-221ENST00000489032 ERC2O15083 957 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 CYP26A1O43174 497 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 IGSF3O75054 1194 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 IGHDP01880 384 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 MCAMP43121 646 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 KIR3DL1P43629 444 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 PMS1P54277 932 aaKnown RBP9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 GSTO1P78417 241 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 TTF1Q15361 905 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 CFAP100Q494V2 611 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 SMC5Q8IY18 1101 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 TMEM192Q8IY95 271 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 TEKT1Q969V4 418 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 MRIQ9BWK5 157 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 ST7Q9NRC1 585 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 ECHDC1Q9NTX5 307 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 RAI14Q9P0K7 980 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 SIRPGQ9P1W8 387 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 LRP2BPQ9P2M1 347 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 ANGEL1Q9UNK9 670 aaKnown RBP9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 STXBP5LQ9Y2K9 1186 aa9.65□□□□□ -0.86
TRAPPC12-221ENST00000489032 UNC80Q8N2C7 3258 aa9.65□□□□□ -0.87
TRAPPC12-221ENST00000489032 KLF4O43474 513 aa9.64□□□□□ -0.87
TRAPPC12-221ENST00000489032 TP53P04637 393 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC12-221ENST00000489032 LDHCP07864 332 aa9.64□□□□□ -0.87
TRAPPC12-221ENST00000489032 ATP5JP18859 108 aa9.64□□□□□ -0.87
TRAPPC12-221ENST00000489032 NCAPHQ15003 741 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms