RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 NKRFO15226 690 aaKnown RBP eCLIP8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 FKTNO75072 461 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 ATG7O95352 703 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 LYPLA2O95372 231 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 CAVIN2O95810 425 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 RPN1P04843 607 aaKnown RBP8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 IDEP14735 1019 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 CYP2C19P33261 490 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 FLT3LGP49771 235 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 PSEN2P49810 448 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 STAT5BP51692 787 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 SOX10P56693 466 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 ASIC1P78348 528 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 TNFAIP2Q03169 654 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 PRKCZQ05513 592 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 IRF5Q13568 498 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 CCL14Q16627 93 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 PRAMEF19Q5SWL8 479 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 NT5DC1Q5TFE4 455 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 DYMQ7RTS9 669 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 GPBP1Q86WP2 473 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 TRIML1Q8N9V2 468 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 SPATA20Q8TB22 786 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 CD99L2Q8TCZ2 262 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 LRRC15Q8TF66 581 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 DDX12PQ92771 950 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 COPS5Q92905 334 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 TRIM9Q9C026 710 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 KATNBL1Q9H079 304 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 NAT10Q9H0A0 1025 aaKnown RBP8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 BHMT2Q9H2M3 363 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 AZI2Q9H6S1 392 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 ZNF302Q9NR11 478 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 FLRT1Q9NZU1 646 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 DACH1Q9UI36 760 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 MAN1B1Q9UKM7 699 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 FAM184BQ9ULE4 1060 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 ARIH1Q9Y4X5 557 aaPredicted RBP8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 MGAMO43451 1857 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 PDE4DIPQ5VU43 2346 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 PVALEFA0A1B0GWK0 134 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 GNRH1P01148 92 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 YWHABP31946 246 aaKnown RBP8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 TCF7P36402 384 aaPredicted RBP8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 SLC12A3P55017 1021 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 KCNB1Q14721 858 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 UGCGQ16739 394 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 CCDC144BQ3MJ40 725 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 HSDL1Q3SXM5 330 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 KMT5BQ4FZB7 885 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 DUSP28Q4G0W2 176 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 ANO6Q4KMQ2 910 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 XKR9Q5GH70 373 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 UTP14CQ5TAP6 766 aaKnown RBP8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 UNC13DQ70J99 1090 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 TRMT1LQ7Z2T5 733 aaKnown RBP8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 GAS2L3Q86XJ1 694 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 CCDC65Q8IXS2 484 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 MLKLQ8NB16 471 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 OR6J1Q8NGC5 347 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 RAET1EQ8TD07 263 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 GLG1Q92896 1179 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 ZDHHC16Q969W1 377 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 GPR20Q99678 358 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 GTPBP4Q9BZE4 634 aaKnown RBP8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 DNAJC25Q9H1X3 360 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 NRBP2Q9NSY0 501 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 ANKEF1Q9NU02 776 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 EXOC1Q9NV70 894 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 WRAP73Q9P2S5 460 aaPredicted RBP8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 DBR1Q9UK59 544 aaKnown RBP8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 PCDHGA10Q9Y5H3 936 aa8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 MAFBQ9Y5Q3 323 aaPredicted RBP8.41□□□□□ -1.06
APOBEC3A-203ENST00000488758 IGKV6D-21A0A0A0MT36 114 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 ZBTB39O15060 712 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 DYNC1LI2O43237 492 aaPredicted RBP8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 KLRC4O43908 158 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 RHOBTB3O94955 611 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 ZNF865P0CJ78 1059 aaPredicted RBP8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 SMPD1P17405 629 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 CYP11B2P19099 503 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 ZNF165P49910 485 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 PRMT2P55345 433 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 ARHGAP1Q07960 439 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 PSMD2Q13200 908 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 MORC3Q14149 939 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 GIT2Q14161 759 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 BRDTQ58F21 947 aaPredicted RBP8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 ARSHQ5FYA8 562 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 XKR3Q5GH77 459 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 TMEM63BQ5T3F8 832 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 GJC2Q5T442 439 aaPredicted RBP8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 ZNF658Q5TYW1 1059 aaPredicted RBP8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 DMRTA1Q5VZB9 504 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 RINT1Q6NUQ1 792 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 CNNM4Q6P4Q7 775 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 PADI6Q6TGC4 694 aa8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 CCDC60Q8IWA6 550 aaPredicted RBP8.4□□□□□ -1.06
APOBEC3A-203ENST00000488758 PPTC7Q8NI37 304 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms