RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 GOLGA6DP0CG33 693 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 ABCB4P21439 1286 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 LLGL1Q15334 1064 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 NAB2Q15742 525 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 KNOP1Q1ED39 458 aaKnown RBP13.89□□□□□ -0.19
CLIC4-202ENST00000488683 EDRF1Q3B7T1 1238 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 Q4G0T1 1027 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 SYDE2Q5VT97 1194 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 MOXD1Q6UVY6 613 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 EPM2AIP1Q7L775 607 aaPredicted RBP13.89□□□□□ -0.19
CLIC4-202ENST00000488683 MYCT1Q8N699 235 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 CASKIN2Q8WXE0 1202 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 ZIM3Q96PE6 472 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 GLT8D2Q9H1C3 349 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 CENPHQ9H3R5 247 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 LRRC4CQ9HCJ2 640 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 OSGEPQ9NPF4 335 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 GOLGA6AQ9NYA3 693 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 ZBTB21Q9ULJ3 1066 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 PRR12Q9ULL5 1215 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 ZBTB12Q9Y330 459 aaPredicted RBP13.89□□□□□ -0.19
CLIC4-202ENST00000488683 RRP15Q9Y3B9 282 aaKnown RBP13.89□□□□□ -0.19
CLIC4-202ENST00000488683 SAMM50Q9Y512 469 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 RAD51CO43502 376 aa13.88□□□□□ -0.19
CLIC4-202ENST00000488683 NR3C1P04150 777 aa13.88□□□□□ -0.19
CLIC4-202ENST00000488683 ITGA4P13612 1032 aa13.88□□□□□ -0.19
CLIC4-202ENST00000488683 SREBF1P36956 1147 aa13.88□□□□□ -0.19
CLIC4-202ENST00000488683 TMEM179Q6ZVK1 233 aa13.88□□□□□ -0.19
CLIC4-202ENST00000488683 RNF10Q8N5U6 811 aaKnown RBP13.88□□□□□ -0.19
CLIC4-202ENST00000488683 MASTLQ96GX5 879 aa13.88□□□□□ -0.19
CLIC4-202ENST00000488683 AIPL1Q9NZN9 384 aa13.88□□□□□ -0.19
CLIC4-202ENST00000488683 GCNT4Q9P109 453 aa13.88□□□□□ -0.19
CLIC4-202ENST00000488683 FEZ2Q9UHY8 353 aaPredicted RBP13.88□□□□□ -0.19
CLIC4-202ENST00000488683 EXOC3L4Q17RC7 722 aa13.88□□□□□ -0.19
CLIC4-202ENST00000488683 FAM84AQ96KN4 292 aa13.88□□□□□ -0.19
CLIC4-202ENST00000488683 PCIF1Q9H4Z3 704 aa13.88□□□□□ -0.19
CLIC4-202ENST00000488683 SEPT11Q9NVA2 429 aaKnown RBP13.88□□□□□ -0.19
CLIC4-202ENST00000488683 TRAF3IP3Q9Y228 551 aa13.88□□□□□ -0.19
CLIC4-202ENST00000488683 TGFB1I1O43294 461 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 CEP104O60308 925 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 BMP3P12645 472 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 XRCC5P13010 732 aaKnown RBP13.87□□□□□ -0.19
CLIC4-202ENST00000488683 ARHGAP44Q17R89 818 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 ARHGAP27Q6ZUM4 889 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 KRT27Q7Z3Y8 459 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 PALB2Q86YC2 1186 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 NLGN1Q8N2Q7 840 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 GOLGA6L1Q8N7Z2 621 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 U2AF1L4Q8WU68 220 aaKnown RBP13.87□□□□□ -0.19
CLIC4-202ENST00000488683 DDX47Q9H0S4 455 aaKnown RBP13.87□□□□□ -0.19
CLIC4-202ENST00000488683 NUCKS1Q9H1E3 243 aaKnown RBP13.87□□□□□ -0.19
CLIC4-202ENST00000488683 RABGAP1Q9Y3P9 1069 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 KIF13BQ9NQT8 1826 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 RAD17O75943 681 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 AFPP02771 609 aaKnown RBP13.87□□□□□ -0.19
CLIC4-202ENST00000488683 ARP10275 920 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 PDCLQ13371 301 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 CFAP221Q4G0U5 840 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 MEI1Q5TIA1 1274 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 STRIP1Q5VSL9 837 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 RINT1Q6NUQ1 792 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 AADACL2Q6P093 401 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 GMCL1P1Q8NEA9 526 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 CELF4Q9BZC1 486 aaKnown RBP13.87□□□□□ -0.19
CLIC4-202ENST00000488683 TRIM31Q9BZY9 425 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 SIX2Q9NPC8 291 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 ACP6Q9NPH0 428 aa13.87□□□□□ -0.19
CLIC4-202ENST00000488683 TULP2O00295 520 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 PDE6BP35913 854 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 FLT3P36888 993 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 MMP14P50281 582 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 CBWD6Q4V339 395 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 CBWD3Q5JTY5 395 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 CBWD5Q5RIA9 395 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 PPP4R3CPQ6ZMV5 832 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 SRLQ86TD4 932 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 GLYCTKQ8IVS8 523 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 SLC35C1Q96A29 364 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 GMCL1Q96IK5 515 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 PDGFDQ9GZP0 370 aaPredicted RBP13.86□□□□□ -0.19
CLIC4-202ENST00000488683 NEUROG2Q9H2A3 272 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 TMEM51Q9NW97 253 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 TAS2R14Q9NYV8 317 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 NR2E1Q9Y466 385 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 PCDHGC5Q9Y5F6 944 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 IGSF9BQ9UPX0 1349 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 YDJCA8MPS7 323 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 TBX3O15119 743 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 TBCAO75347 108 aaKnown RBP13.86□□□□□ -0.19
CLIC4-202ENST00000488683 SLITRK3O94933 977 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 CCT5P48643 541 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 SF3A3Q12874 501 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLIC4-202ENST00000488683 CCDC70Q6NSX1 233 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 ALKBH5Q6P6C2 394 aaKnown RBP13.86□□□□□ -0.19
CLIC4-202ENST00000488683 ERMNQ8TAM6 284 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 FAM76AQ8TAV0 307 aa13.86□□□□□ -0.19
CLIC4-202ENST00000488683 IGLV3-22A0A075B6J6 115 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 ZEB2O60315 1214 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 APBA3O96018 575 aa13.85□□□□□ -0.19
CLIC4-202ENST00000488683 CIITAP33076 1130 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms