RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 MKRN4PQ13434 485 aaPredicted RBP26.73■■□□□ 1.87
RNF38-208ENST00000488058 PPP4R3AQ6IN85 833 aa26.73■■□□□ 1.87
RNF38-208ENST00000488058 TSHZ1Q6ZSZ6 1077 aa26.73■■□□□ 1.87
RNF38-208ENST00000488058 NME8Q8N427 588 aa26.73■■□□□ 1.87
RNF38-208ENST00000488058 METTL13Q8N6R0 699 aa26.73■■□□□ 1.87
RNF38-208ENST00000488058 ARNTL2Q8WYA1 636 aa26.73■■□□□ 1.87
RNF38-208ENST00000488058 RAD9AQ99638 391 aa26.73■■□□□ 1.87
RNF38-208ENST00000488058 CELF4Q9BZC1 486 aaKnown RBP26.73■■□□□ 1.87
RNF38-208ENST00000488058 NRBP2Q9NSY0 501 aa26.73■■□□□ 1.87
RNF38-208ENST00000488058 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.72■■□□□ 1.87
RNF38-208ENST00000488058 BTBD18B2RXH4 712 aa26.72■■□□□ 1.87
RNF38-208ENST00000488058 C22orf31O95567 290 aa26.72■■□□□ 1.87
RNF38-208ENST00000488058 RDM1Q8NG50 284 aa26.72■■□□□ 1.87
RNF38-208ENST00000488058 PPM1EQ8WY54 764 aa26.72■■□□□ 1.87
RNF38-208ENST00000488058 TNFRSF25Q93038 417 aa26.72■■□□□ 1.87
RNF38-208ENST00000488058 PPP1R16BQ96T49 567 aa26.72■■□□□ 1.87
RNF38-208ENST00000488058 SH2B1Q9NRF2 756 aaPredicted RBP26.72■■□□□ 1.87
RNF38-208ENST00000488058 CD52P31358 61 aa26.71■■□□□ 1.87
RNF38-208ENST00000488058 ADGRE1Q14246 886 aa26.71■■□□□ 1.87
RNF38-208ENST00000488058 RABEP1Q15276 862 aa26.71■■□□□ 1.87
RNF38-208ENST00000488058 POTEDQ86YR6 584 aa26.71■■□□□ 1.87
RNF38-208ENST00000488058 LLPHQ9BRT6 129 aaKnown RBP26.71■■□□□ 1.87
RNF38-208ENST00000488058 AGO3Q9H9G7 860 aaKnown RBP26.71■■□□□ 1.87
RNF38-208ENST00000488058 RFXAPO00287 272 aa26.7■■□□□ 1.86
RNF38-208ENST00000488058 SPRED2Q7Z698 418 aa26.7■■□□□ 1.86
RNF38-208ENST00000488058 KIAA0319LQ8IZA0 1049 aa26.7■■□□□ 1.86
RNF38-208ENST00000488058 C8orf76Q96K31 380 aa26.7■■□□□ 1.86
RNF38-208ENST00000488058 FAM20AQ96MK3 541 aa26.7■■□□□ 1.86
RNF38-208ENST00000488058 KCNMB3Q9NPA1 279 aa26.7■■□□□ 1.86
RNF38-208ENST00000488058 SEPT9Q9UHD8 586 aaPredicted RBP26.7■■□□□ 1.86
RNF38-208ENST00000488058 INSL6Q9Y581 213 aa26.7■■□□□ 1.86
RNF38-208ENST00000488058 CLCN3P51790 818 aa26.69■■□□□ 1.86
RNF38-208ENST00000488058 PAK2Q13177 524 aa26.69■■□□□ 1.86
RNF38-208ENST00000488058 SAFBQ15424 915 aaKnown RBP eCLIP26.69■■□□□ 1.86
RNF38-208ENST00000488058 B3GNT9Q6UX72 402 aa26.69■■□□□ 1.86
RNF38-208ENST00000488058 USP38Q8NB14 1042 aa26.69■■□□□ 1.86
RNF38-208ENST00000488058 FAM184AQ8NB25 1140 aa26.69■■□□□ 1.86
RNF38-208ENST00000488058 BANK1Q8NDB2 785 aa26.69■■□□□ 1.86
RNF38-208ENST00000488058 MTUS1Q9ULD2 1270 aa26.69■■□□□ 1.86
RNF38-208ENST00000488058 EML1O00423 815 aa26.68■■□□□ 1.86
RNF38-208ENST00000488058 MAGEB2O15479 319 aa26.68■■□□□ 1.86
RNF38-208ENST00000488058 ST18O60284 1047 aa26.68■■□□□ 1.86
RNF38-208ENST00000488058 BAG4O95429 457 aaKnown RBP26.68■■□□□ 1.86
RNF38-208ENST00000488058 VTNP04004 478 aa26.68■■□□□ 1.86
RNF38-208ENST00000488058 MTERF2Q49AM1 385 aa26.68■■□□□ 1.86
RNF38-208ENST00000488058 EFCAB12Q6NXP0 572 aa26.68■■□□□ 1.86
RNF38-208ENST00000488058 TOP1MTQ969P6 601 aa26.68■■□□□ 1.86
RNF38-208ENST00000488058 YME1L1Q96TA2 773 aa26.68■■□□□ 1.86
RNF38-208ENST00000488058 VAV3Q9UKW4 847 aa26.68■■□□□ 1.86
RNF38-208ENST00000488058 SQORQ9Y6N5 450 aa26.68■■□□□ 1.86
RNF38-208ENST00000488058 KDM3AQ9Y4C1 1321 aa26.67■■□□□ 1.86
RNF38-208ENST00000488058 EPOPA6NHQ4 379 aa26.67■■□□□ 1.86
RNF38-208ENST00000488058 TBX3O15119 743 aa26.67■■□□□ 1.86
RNF38-208ENST00000488058 HMGN5P82970 282 aaKnown RBP26.67■■□□□ 1.86
RNF38-208ENST00000488058 PPP2R5CQ13362 524 aa26.67■■□□□ 1.86
RNF38-208ENST00000488058 CCDC85BQ15834 202 aaPredicted RBP26.67■■□□□ 1.86
RNF38-208ENST00000488058 TMEM266Q2M3C6 531 aa26.67■■□□□ 1.86
RNF38-208ENST00000488058 NCAPH2Q6IBW4 605 aa26.67■■□□□ 1.86
RNF38-208ENST00000488058 MICALL1Q8N3F8 863 aa26.67■■□□□ 1.86
RNF38-208ENST00000488058 LRRC71Q8N4P6 559 aa26.67■■□□□ 1.86
RNF38-208ENST00000488058 HAS1Q92839 578 aa26.67■■□□□ 1.86
RNF38-208ENST00000488058 MAP7D2Q96T17 732 aa26.67■■□□□ 1.86
RNF38-208ENST00000488058 CDHR5Q9HBB8 845 aa26.67■■□□□ 1.86
RNF38-208ENST00000488058 PADI3Q9ULW8 664 aa26.67■■□□□ 1.86
RNF38-208ENST00000488058 AKT3Q9Y243 479 aa26.67■■□□□ 1.86
RNF38-208ENST00000488058 COL6A3P12111 3177 aa26.66■■□□□ 1.86
RNF38-208ENST00000488058 LINC01553A4QN01 128 aa26.66■■□□□ 1.86
RNF38-208ENST00000488058 TMEM150BA6NC51 233 aa26.66■■□□□ 1.86
RNF38-208ENST00000488058 ATP2B1P20020 1258 aa26.66■■□□□ 1.86
RNF38-208ENST00000488058 TMOD1P28289 359 aa26.66■■□□□ 1.86
RNF38-208ENST00000488058 TBC1D8BQ0IIM8 1120 aa26.66■■□□□ 1.86
RNF38-208ENST00000488058 NFX1Q12986 1120 aaKnown RBP26.66■■□□□ 1.86
RNF38-208ENST00000488058 KIZQ2M2Z5 673 aa26.66■■□□□ 1.86
RNF38-208ENST00000488058 XKR3Q5GH77 459 aa26.66■■□□□ 1.86
RNF38-208ENST00000488058 SUGCTQ9HAC7 445 aa26.66■■□□□ 1.86
RNF38-208ENST00000488058 DDX11L8A8MPP1 907 aa26.65■■□□□ 1.86
RNF38-208ENST00000488058 ENPP3O14638 875 aa26.65■■□□□ 1.86
RNF38-208ENST00000488058 PSMC5P62195 406 aa26.65■■□□□ 1.86
RNF38-208ENST00000488058 HTRA4P83105 476 aaPredicted RBP26.65■■□□□ 1.86
RNF38-208ENST00000488058 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.65■■□□□ 1.86
RNF38-208ENST00000488058 SLFN12Q8IYM2 578 aa26.65■■□□□ 1.86
RNF38-208ENST00000488058 TGS1Q96RS0 853 aaKnown RBP26.65■■□□□ 1.86
RNF38-208ENST00000488058 OSMRQ99650 979 aa26.65■■□□□ 1.86
RNF38-208ENST00000488058 SH2D3AQ9BRG2 576 aa26.65■■□□□ 1.86
RNF38-208ENST00000488058 COL4A4P53420 1690 aaPredicted RBP26.65■■□□□ 1.86
RNF38-208ENST00000488058 RPS6KA5O75582 802 aa26.64■■□□□ 1.86
RNF38-208ENST00000488058 IBSPP21815 317 aaPredicted RBP26.64■■□□□ 1.86
RNF38-208ENST00000488058 CALCRLQ16602 461 aa26.64■■□□□ 1.86
RNF38-208ENST00000488058 FTHL17Q9BXU8 183 aa26.64■■□□□ 1.86
RNF38-208ENST00000488058 NOC2LQ9Y3T9 749 aaKnown RBP26.64■■□□□ 1.86
RNF38-208ENST00000488058 CDH23Q9H251 3354 aa26.64■■□□□ 1.85
RNF38-208ENST00000488058 WNT7AO00755 349 aa26.63■■□□□ 1.85
RNF38-208ENST00000488058 GTPBP6O43824 516 aaPredicted RBP26.63■■□□□ 1.85
RNF38-208ENST00000488058 GNL2Q13823 731 aaKnown RBP26.63■■□□□ 1.85
RNF38-208ENST00000488058 TMEM40Q8WWA1 233 aa26.63■■□□□ 1.85
RNF38-208ENST00000488058 LINC01599Q8WXQ3 324 aa26.63■■□□□ 1.85
RNF38-208ENST00000488058 ZNF668Q96K58 619 aaPredicted RBP26.63■■□□□ 1.85
RNF38-208ENST00000488058 NEMFO60524 1076 aa26.62■■□□□ 1.85
RNF38-208ENST00000488058 STBD1O95210 358 aa26.62■■□□□ 1.85
RNF38-208ENST00000488058 QARSP47897 775 aaKnown RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms