RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 MAGEC2Q9UBF1 373 aaPredicted RBP10.44□□□□□ -0.74
SF3B1-211ENST00000487698 TRAF3IP3Q9Y228 551 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 UBE4BO95155 1302 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 ZMYM2Q9UBW7 1377 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 SFI1A8K8P3 1242 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 STRNO43815 780 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 DKC1O60832 514 aaKnown RBP eCLIP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 FKBP3Q00688 224 aaKnown RBP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 NEDD9Q14511 834 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 KNOP1Q1ED39 458 aaKnown RBP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 ZNF792Q3KQV3 632 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 MIIPQ5JXC2 388 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 UTP14CQ5TAP6 766 aaKnown RBP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 PLA2G4FQ68DD2 849 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 SWSAP1Q6NVH7 229 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 NELFCDQ8IXH7 590 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 MYCT1Q8N699 235 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 CEP63Q96MT8 703 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 TUBGCP2Q9BSJ2 902 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 STRA6Q9BX79 667 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 VPS16Q9H269 839 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 ZCCHC17Q9NP64 241 aaKnown RBP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 MANSC4A6NHS7 340 aaPredicted RBP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 IGF2BP3O00425 579 aaKnown RBP eCLIP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 PDXKO00764 312 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 NKRFO15226 690 aaKnown RBP eCLIP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 USO1O60763 962 aaKnown RBP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 PPP1R37O75864 691 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 ARIH2O95376 493 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 FGFR1OPO95684 399 aaKnown RBP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 SFPQP23246 707 aaKnown RBP eCLIP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 ADORA2AP29274 412 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 NMT1P30419 496 aaKnown RBP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 CLCN1P35523 988 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 ZNF157P51786 506 aaPredicted RBP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 NPEPPSP55786 919 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 PRKCEQ02156 737 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 SP4Q02446 784 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 KCNV1Q6PIU1 500 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 METTL7BQ6UX53 244 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 ZNF720Q7Z2F6 126 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 DDX41Q9UJV9 622 aaKnown RBP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 MAFBQ9Y5Q3 323 aaPredicted RBP10.43□□□□□ -0.74
SF3B1-211ENST00000487698 SIP14410 1827 aa10.43□□□□□ -0.74
SF3B1-211ENST00000487698 A0A1W2PQC6 194 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 GSTTP1A0A1W2PQM5 241 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 ASB14A6NK59 587 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 SORBS3O60504 671 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 PRPF6O94906 941 aaKnown RBP10.42□□□□□ -0.74
SF3B1-211ENST00000487698 GCNT3O95395 438 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 SLC10A3P09131 477 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 MAPTP10636 758 aaKnown RBP10.42□□□□□ -0.74
SF3B1-211ENST00000487698 MARSP56192 900 aaKnown RBP10.42□□□□□ -0.74
SF3B1-211ENST00000487698 GRB14Q14449 540 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 XKR9Q5GH70 373 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 ODR4Q5SWX8 454 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 RGMBQ6NW40 437 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 CCDC62Q6P9F0 684 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 EEPD1Q7L9B9 569 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 GPR142Q7Z601 462 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 ZNF467Q7Z7K2 595 aaPredicted RBP10.42□□□□□ -0.74
SF3B1-211ENST00000487698 FBXO16Q8IX29 292 aaPredicted RBP10.42□□□□□ -0.74
SF3B1-211ENST00000487698 PIAS4Q8N2W9 510 aaPredicted RBP10.42□□□□□ -0.74
SF3B1-211ENST00000487698 CCDC43Q96MW1 224 aaKnown RBP10.42□□□□□ -0.74
SF3B1-211ENST00000487698 SH2D3AQ9BRG2 576 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 TYW1Q9NV66 732 aaKnown RBP10.42□□□□□ -0.74
SF3B1-211ENST00000487698 GGPS1O95749 300 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 ATP4AP20648 1035 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 KCNA1Q09470 495 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 LY6KQ17RY6 165 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 XKR3Q5GH77 459 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 ARMCX2Q7L311 632 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 OTUD6AQ7L8S5 288 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 FAM178BQ8IXR5 827 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 TC2NQ8N9U0 490 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 AFAP1L1Q8TED9 768 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 DRC1Q96MC2 740 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 PCYT2Q99447 389 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 TMX1Q9H3N1 280 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 ZNF302Q9NR11 478 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 PDLIM7Q9NR12 457 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 TLL2Q9Y6L7 1015 aa10.42□□□□□ -0.74
SF3B1-211ENST00000487698 TGFB1I1O43294 461 aa10.41□□□□□ -0.74
SF3B1-211ENST00000487698 SKILP12757 684 aa10.41□□□□□ -0.74
SF3B1-211ENST00000487698 PLS3P13797 630 aa10.41□□□□□ -0.74
SF3B1-211ENST00000487698 PRKCSHP14314 528 aaPredicted RBP10.41□□□□□ -0.74
SF3B1-211ENST00000487698 MAPK4P31152 587 aa10.41□□□□□ -0.74
SF3B1-211ENST00000487698 MTIF2P46199 727 aaKnown RBP10.41□□□□□ -0.74
SF3B1-211ENST00000487698 DNM2P50570 870 aa10.41□□□□□ -0.74
SF3B1-211ENST00000487698 UBXN1Q04323 297 aa10.41□□□□□ -0.74
SF3B1-211ENST00000487698 NFIL3Q16649 462 aa10.41□□□□□ -0.74
SF3B1-211ENST00000487698 MAN2A1Q16706 1144 aa10.41□□□□□ -0.74
SF3B1-211ENST00000487698 ZC2HC1CQ53FD0 456 aaPredicted RBP10.41□□□□□ -0.74
SF3B1-211ENST00000487698 CEP135Q66GS9 1140 aa10.41□□□□□ -0.74
SF3B1-211ENST00000487698 STXBP4Q6ZWJ1 553 aa10.41□□□□□ -0.74
SF3B1-211ENST00000487698 CREBRFQ8IUR6 639 aa10.41□□□□□ -0.74
SF3B1-211ENST00000487698 TMEM139Q8IV31 216 aa10.41□□□□□ -0.74
SF3B1-211ENST00000487698 ST6GALNAC4Q9H4F1 302 aa10.41□□□□□ -0.74
SF3B1-211ENST00000487698 LARSQ9P2J5 1176 aaKnown RBP10.41□□□□□ -0.74
SF3B1-211ENST00000487698 IVNS1ABPQ9Y6Y0 642 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms