RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 EARS2Q5JPH6 523 aaKnown RBP12.92□□□□□ -0.34
SPEN-205ENST00000487496 PPP4R3AQ6IN85 833 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 PIK3AP1Q6ZUJ8 805 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 MICAL3Q7RTP6 2002 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 MIER3Q7Z3K6 550 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 NEK8Q86SG6 692 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 RDM1Q8NG50 284 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 SP7Q8TDD2 431 aaPredicted RBP12.92□□□□□ -0.34
SPEN-205ENST00000487496 FAM167AQ96KS9 214 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 KIF2CQ99661 725 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 CEP131Q9UPN4 1083 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 LIMCH1Q9UPQ0 1083 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 MAGEB2O15479 319 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 LPXNO60711 386 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 OATP04181 439 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 KRT2P35908 639 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 ERVK-21P61565 698 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 PRKCEQ02156 737 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 NR5A1Q13285 461 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 GRB10Q13322 594 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 METTL13Q8N6R0 699 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 TNFRSF25Q93038 417 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 TGS1Q96RS0 853 aaKnown RBP12.91□□□□□ -0.34
SPEN-205ENST00000487496 YME1L1Q96TA2 773 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 SUGCTQ9HAC7 445 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 CDHR5Q9HBB8 845 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 KCNMB3Q9NPA1 279 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 PRDM6Q9NQX0 595 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 NRBP2Q9NSY0 501 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 MTUS1Q9ULD2 1270 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 PADI3Q9ULW8 664 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 GINS2Q9Y248 185 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 MTCH2Q9Y6C9 303 aa12.91□□□□□ -0.34
SPEN-205ENST00000487496 SIP14410 1827 aa12.9□□□□□ -0.34
SPEN-205ENST00000487496 FAM205CA6NFA0 338 aa12.9□□□□□ -0.34
SPEN-205ENST00000487496 DLL1O00548 723 aa12.9□□□□□ -0.34
SPEN-205ENST00000487496 GTPBP6O43824 516 aaPredicted RBP12.9□□□□□ -0.34
SPEN-205ENST00000487496 CCNT1O60563 726 aaKnown RBP12.9□□□□□ -0.34
SPEN-205ENST00000487496 GCFC2P16383 781 aaKnown RBP12.9□□□□□ -0.34
SPEN-205ENST00000487496 PAK2Q13177 524 aa12.9□□□□□ -0.34
SPEN-205ENST00000487496 KRT40Q6A162 431 aa12.9□□□□□ -0.34
SPEN-205ENST00000487496 RTN4RL1Q86UN2 441 aaPredicted RBP12.9□□□□□ -0.34
SPEN-205ENST00000487496 LINC01599Q8WXQ3 324 aa12.9□□□□□ -0.34
SPEN-205ENST00000487496 HAS1Q92839 578 aa12.9□□□□□ -0.34
SPEN-205ENST00000487496 FAM20AQ96MK3 541 aa12.9□□□□□ -0.34
SPEN-205ENST00000487496 NAP1L4Q99733 375 aaKnown RBP12.9□□□□□ -0.34
SPEN-205ENST00000487496 FTHL17Q9BXU8 183 aa12.9□□□□□ -0.34
SPEN-205ENST00000487496 BRMS1Q9HCU9 246 aa12.9□□□□□ -0.34
SPEN-205ENST00000487496 BTBD18B2RXH4 712 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 TBX3O15119 743 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 RPS6KA5O75582 802 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 STBD1O95210 358 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 MMP1P03956 469 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 FOSBP53539 338 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 PPP2R5CQ13362 524 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 KIZQ2M2Z5 673 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 TMEM266Q2M3C6 531 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 EFCAB12Q6NXP0 572 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 CCDC83Q8IWF9 413 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 MICALL1Q8N3F8 863 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 LINC01465Q8N7H1 131 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 GDPD5Q8WTR4 605 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 TMEM40Q8WWA1 233 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 C17orf80Q9BSJ5 609 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 TMX1Q9H3N1 280 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 VAV3Q9UKW4 847 aa12.89□□□□□ -0.35
SPEN-205ENST00000487496 NOC2LQ9Y3T9 749 aaKnown RBP12.89□□□□□ -0.35
SPEN-205ENST00000487496 MYH9P35579 1960 aaKnown RBP12.89□□□□□ -0.35
SPEN-205ENST00000487496 CHD7Q9P2D1 2997 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 EML1O00423 815 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 GPR32O75388 356 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 VTNP04004 478 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 TMOD1P28289 359 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 RBM25P49756 843 aaKnown RBP12.88□□□□□ -0.35
SPEN-205ENST00000487496 CLCN3P51790 818 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 CRYBB1P53674 252 aaPredicted RBP12.88□□□□□ -0.35
SPEN-205ENST00000487496 NFX1Q12986 1120 aaKnown RBP12.88□□□□□ -0.35
SPEN-205ENST00000487496 TRIM29Q14134 588 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 TARBP2Q15633 366 aaKnown RBP12.88□□□□□ -0.35
SPEN-205ENST00000487496 XKR3Q5GH77 459 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 POTEDQ86YR6 584 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 DIS3L2Q8IYB7 885 aaKnown RBP12.88□□□□□ -0.35
SPEN-205ENST00000487496 CRIPAKQ8N1N5 446 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 LRRC71Q8N4P6 559 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 BANK1Q8NDB2 785 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 ZSCAN31Q96LW9 406 aaPredicted RBP12.88□□□□□ -0.35
SPEN-205ENST00000487496 PPP1R16BQ96T49 567 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 OSMRQ99650 979 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 LLPHQ9BRT6 129 aaKnown RBP12.88□□□□□ -0.35
SPEN-205ENST00000487496 NIFKQ9BYG3 293 aaKnown RBP12.88□□□□□ -0.35
SPEN-205ENST00000487496 TSPYL2Q9H2G4 693 aaPredicted RBP12.88□□□□□ -0.35
SPEN-205ENST00000487496 ERVK-5Q9HDB9 667 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 ST3GAL5Q9UNP4 418 aa12.88□□□□□ -0.35
SPEN-205ENST00000487496 PRRC2BQ5JSZ5 2229 aaKnown RBP12.88□□□□□ -0.35
SPEN-205ENST00000487496 TMEM150BA6NC51 233 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 DDX11L8A8MPP1 907 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 GPR182O15218 404 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 MARCH6O60337 910 aa12.87□□□□□ -0.35
SPEN-205ENST00000487496 NLRP11P59045 1033 aaKnown RBP12.87□□□□□ -0.35
SPEN-205ENST00000487496 PSMC5P62195 406 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms