RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TMEM40Q8WWA1 233 aa22.18■■□□□ 1.14
SMPDL3A-202ENST00000487215 PBXIP1Q96AQ6 731 aa22.18■■□□□ 1.14
SMPDL3A-202ENST00000487215 CDHR5Q9HBB8 845 aa22.18■■□□□ 1.14
SMPDL3A-202ENST00000487215 RIC8AQ9NPQ8 531 aa22.18■■□□□ 1.14
SMPDL3A-202ENST00000487215 PCDHB12Q9Y5F1 795 aa22.18■■□□□ 1.14
SMPDL3A-202ENST00000487215 TBKBP1A7MCY6 615 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 RPS6KA5O75582 802 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 ZXDAP98168 799 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 RBM10P98175 930 aaKnown RBP22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 FAM102BQ5T8I3 360 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 IER5LQ5T953 404 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 PPP1R18Q6NYC8 613 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 KIAA0319LQ8IZA0 1049 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 VN1R2Q8NFZ6 395 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 ATP8B4Q8TF62 1192 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 PHOX2BQ99453 314 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 ADAM2Q99965 735 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 PHF7Q9BWX1 381 aaPredicted RBP22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 TLR9Q9NR96 1032 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 AAASQ9NRG9 546 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 RGS18Q9NS28 235 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 C1orf112Q9NSG2 853 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 HCSTQ9UBK5 93 aa22.17■■□□□ 1.14
SMPDL3A-202ENST00000487215 DENND3A2RUS2 1198 aa22.16■■□□□ 1.14
SMPDL3A-202ENST00000487215 DDX39AO00148 427 aaKnown RBP22.16■■□□□ 1.14
SMPDL3A-202ENST00000487215 MEIS1O00470 390 aa22.16■■□□□ 1.14
SMPDL3A-202ENST00000487215 BACH1O14867 736 aa22.16■■□□□ 1.14
SMPDL3A-202ENST00000487215 HBP1O60381 514 aa22.16■■□□□ 1.14
SMPDL3A-202ENST00000487215 FGF18O76093 207 aa22.16■■□□□ 1.14
SMPDL3A-202ENST00000487215 FOSP01100 380 aaPredicted RBP22.16■■□□□ 1.14
SMPDL3A-202ENST00000487215 CREB3L3Q68CJ9 461 aa22.16■■□□□ 1.14
SMPDL3A-202ENST00000487215 ABHD15Q6UXT9 468 aa22.16■■□□□ 1.14
SMPDL3A-202ENST00000487215 FAM43BQ6ZT52 329 aaPredicted RBP22.16■■□□□ 1.14
SMPDL3A-202ENST00000487215 SLC24A5Q71RS6 500 aa22.16■■□□□ 1.14
SMPDL3A-202ENST00000487215 TEX2Q8IWB9 1127 aa22.16■■□□□ 1.14
SMPDL3A-202ENST00000487215 RPGRIP1Q96KN7 1286 aa22.16■■□□□ 1.14
SMPDL3A-202ENST00000487215 ST3GAL5Q9UNP4 418 aa22.16■■□□□ 1.14
SMPDL3A-202ENST00000487215 COL1A2P08123 1366 aa22.15■■□□□ 1.14
SMPDL3A-202ENST00000487215 C9IYK1 514 aa22.15■■□□□ 1.14
SMPDL3A-202ENST00000487215 SREBF1P36956 1147 aa22.15■■□□□ 1.14
SMPDL3A-202ENST00000487215 ADCY7P51828 1080 aa22.15■■□□□ 1.14
SMPDL3A-202ENST00000487215 ERVFC1P60507 584 aa22.15■■□□□ 1.14
SMPDL3A-202ENST00000487215 NECTIN1Q15223 517 aa22.15■■□□□ 1.14
SMPDL3A-202ENST00000487215 DUSP6Q16828 381 aa22.15■■□□□ 1.14
SMPDL3A-202ENST00000487215 FAM160B1Q5W0V3 765 aa22.15■■□□□ 1.14
SMPDL3A-202ENST00000487215 CCDC60Q8IWA6 550 aaPredicted RBP22.15■■□□□ 1.14
SMPDL3A-202ENST00000487215 SUSD6Q92537 303 aa22.15■■□□□ 1.14
SMPDL3A-202ENST00000487215 CDCA3Q99618 268 aaPredicted RBP22.15■■□□□ 1.14
SMPDL3A-202ENST00000487215 TMEM260Q9NX78 707 aa22.15■■□□□ 1.14
SMPDL3A-202ENST00000487215 FNDC1Q4ZHG4 1894 aaPredicted RBP22.14■■□□□ 1.13
SMPDL3A-202ENST00000487215 ATF7P17544 494 aaPredicted RBP22.14■■□□□ 1.13
SMPDL3A-202ENST00000487215 FUT2Q10981 343 aa22.14■■□□□ 1.13
SMPDL3A-202ENST00000487215 PKN1Q16512 942 aa22.14■■□□□ 1.13
SMPDL3A-202ENST00000487215 ODR4Q5SWX8 454 aa22.14■■□□□ 1.13
SMPDL3A-202ENST00000487215 APOA5Q6Q788 366 aa22.14■■□□□ 1.13
SMPDL3A-202ENST00000487215 SYNE3Q6ZMZ3 975 aa22.14■■□□□ 1.13
SMPDL3A-202ENST00000487215 SUGP1Q8IWZ8 645 aaKnown RBP22.14■■□□□ 1.13
SMPDL3A-202ENST00000487215 THNSL1Q8IYQ7 743 aa22.14■■□□□ 1.13
SMPDL3A-202ENST00000487215 COLGALT1Q8NBJ5 622 aa22.14■■□□□ 1.13
SMPDL3A-202ENST00000487215 PPP1R16BQ96T49 567 aa22.14■■□□□ 1.13
SMPDL3A-202ENST00000487215 TYW1Q9NV66 732 aaKnown RBP22.14■■□□□ 1.13
SMPDL3A-202ENST00000487215 RBM28Q9NW13 759 aaKnown RBP22.14■■□□□ 1.13
SMPDL3A-202ENST00000487215 RNF216Q9NWF9 866 aaPredicted RBP22.14■■□□□ 1.13
SMPDL3A-202ENST00000487215 FSD2A1L4K1 749 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 ZBTB42B2RXF5 422 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 FSCN2O14926 492 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 GPR182O15218 404 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 FGFR1P11362 822 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 ZNF76P36508 570 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 CLK2P49760 499 aaKnown RBP22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 PTPN5P54829 565 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 AP3B2Q13367 1082 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 ZNF484Q5JVG2 852 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 PDXDC2PQ6P474 469 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 NIPA1Q7RTP0 329 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 FAM228AQ86W67 206 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 FBXL6Q8N531 539 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 NEK1Q96PY6 1258 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 OSMRQ99650 979 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 ESYT1Q9BSJ8 1104 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 CWH43Q9H720 699 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 ZNF302Q9NR11 478 aa22.13■■□□□ 1.13
SMPDL3A-202ENST00000487215 SMCO2A6NFE2 343 aa22.12■■□□□ 1.13
SMPDL3A-202ENST00000487215 ATP4AP20648 1035 aa22.12■■□□□ 1.13
SMPDL3A-202ENST00000487215 SIGLEC14Q08ET2 396 aa22.12■■□□□ 1.13
SMPDL3A-202ENST00000487215 KIZQ2M2Z5 673 aa22.12■■□□□ 1.13
SMPDL3A-202ENST00000487215 PDE12Q6L8Q7 609 aaKnown RBP22.12■■□□□ 1.13
SMPDL3A-202ENST00000487215 ATP6V0A4Q9HBG4 840 aa22.12■■□□□ 1.13
SMPDL3A-202ENST00000487215 TMEM161AQ9NX61 479 aa22.12■■□□□ 1.13
SMPDL3A-202ENST00000487215 FAM86B1E9PN63 330 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 hCG_1984214I3L0E3 225 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 DHX15O43143 795 aaKnown RBP22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 C22orf31O95567 290 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 FAM86B2P0C5J1 330 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 LAG3P18627 525 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 CRYBB1P53674 252 aaPredicted RBP22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 FAM189BP81408 668 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 APOBRQ0VD83 1088 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 TCF15Q12870 199 aa22.11■■□□□ 1.13
SMPDL3A-202ENST00000487215 KCNC3Q14003 757 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms