RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 TECP42680 631 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 ABL2P42684 1182 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 MMP13P45452 471 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 ADCY1Q08828 1119 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 PPP1R15BQ5SWA1 713 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 C10orf76Q5T2E6 689 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 APBB1IPQ7Z5R6 666 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-209ENST00000487188 TRIM74Q86UV6 250 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 TRIM73Q86UV7 250 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 MYOCDQ8IZQ8 938 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 AGGF1Q8N302 714 aaeCLIP6.75□□□□□ -1.33
VPS13D-209ENST00000487188 ZNF513Q8N8E2 541 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-209ENST00000487188 PIGOQ8TEQ8 1089 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 PGM2Q96G03 612 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 DCAF5Q96JK2 942 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 RUNDC3BQ96NL0 473 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 LRRC27Q9C0I9 530 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 SEMA6BQ9H3T3 888 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 KBTBD4Q9NVX7 518 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 A6NHS1 94 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 CES2O00748 559 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 ABLIM1O14639 778 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 ATP5HO75947 161 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 NPTXRO95502 500 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 CALB2P22676 271 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 PUM3Q15397 648 aaKnown RBP6.75□□□□□ -1.33
VPS13D-209ENST00000487188 DBN1Q16643 649 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 SLC5A9Q2M3M2 681 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 NAALADL2Q58DX5 795 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 SPTY2D1Q68D10 685 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-209ENST00000487188 CEP128Q6ZU80 1094 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 SCFD2Q8WU76 684 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 ATXN2LQ8WWM7 1075 aaKnown RBP6.75□□□□□ -1.33
VPS13D-209ENST00000487188 KIFAP3Q92845 792 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 RAB34Q9BZG1 259 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 TMEM60Q9H2L4 133 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 TBC1D7Q9P0N9 293 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 RGS17Q9UGC6 210 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-209ENST00000487188 PCDHA4Q9UN74 947 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 BCL9LQ86UU0 1499 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 CNTNAP5Q8WYK1 1306 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 TMEM120BA0PK00 339 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 WFS1O76024 890 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 ALADP13716 330 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 IGHMBP2P38935 993 aaKnown RBP6.75□□□□□ -1.33
VPS13D-209ENST00000487188 TXKP42681 527 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 TXNRD1Q16881 649 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 ANO7Q6IWH7 933 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 BICDL1Q6ZP65 573 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 ILDR2Q71H61 639 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 TTLL11Q8NHH1 800 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 STK32AQ8WU08 396 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 CTNNBL1Q8WYA6 563 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-209ENST00000487188 ERP27Q96DN0 273 aa6.75□□□□□ -1.33
VPS13D-209ENST00000487188 ECM29Q5VYK3 1845 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 MARF1Q9Y4F3 1742 aaKnown RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 PFDN1O60925 122 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 PPFIA2O75334 1257 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 LMNAP02545 664 aaKnown RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 MYBP10242 640 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 ABCB4P21439 1286 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 ECHS1P30084 290 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 FKBP3Q00688 224 aaKnown RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 BNIP1Q12981 228 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 SEPT7Q16181 437 aaKnown RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 PFKFB3Q16875 520 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 DCAF17Q5H9S7 520 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 MEX3CQ5U5Q3 659 aaKnown RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 SYCP3Q8IZU3 236 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 AK8Q96MA6 479 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 EPAS1Q99814 870 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 PITPNM3Q9BZ71 974 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 KANSL2Q9H9L4 492 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 DISP2A7MBM2 1401 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 ABCA3Q99758 1704 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 NID2Q14112 1375 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 FAM187AA6NFU0 413 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 E7ENQ6 273 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 LAD1O00515 517 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 RNF8O76064 485 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 PDE8BO95263 885 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 ACSL3O95573 720 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 SP100P23497 879 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 TARSP26639 723 aaKnown RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 COPB2P35606 906 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 PEX5P50542 639 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 NAPAP54920 295 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 CNGA2Q16280 664 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 HLFQ16534 295 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 KIAA1755Q5JYT7 1200 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 SEL1L2Q5TEA6 688 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 RNF220Q5VTB9 566 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 BARGINQ6ZT62 677 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 UNC13DQ70J99 1090 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 KSR1Q8IVT5 923 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 CCDC105Q8IYK2 499 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 GUF1Q8N442 669 aaKnown RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 SRBD1Q8N5C6 995 aaKnown RBP6.74□□□□□ -1.33
VPS13D-209ENST00000487188 WDR66Q8TBY9 1149 aa6.74□□□□□ -1.33
VPS13D-209ENST00000487188 SYN2Q92777 582 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms