RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 BTG3Q14201 252 aaPredicted RBP20■□□□□ 0.79
MCF2L-226ENST00000486210 FBXO47Q5MNV8 452 aa20■□□□□ 0.79
MCF2L-226ENST00000486210 ADGRD2Q7Z7M1 963 aa20■□□□□ 0.79
MCF2L-226ENST00000486210 ZNF713Q8N859 430 aaPredicted RBP20■□□□□ 0.79
MCF2L-226ENST00000486210 SENP7Q9BQF6 1050 aa20■□□□□ 0.79
MCF2L-226ENST00000486210 PLAGL2Q9UPG8 496 aa20■□□□□ 0.79
MCF2L-226ENST00000486210 SMC3Q9UQE7 1217 aa20■□□□□ 0.79
MCF2L-226ENST00000486210 RBM19Q9Y4C8 960 aaKnown RBP20■□□□□ 0.79
MCF2L-226ENST00000486210 ZSCAN21Q9Y5A6 473 aaPredicted RBP20■□□□□ 0.79
MCF2L-226ENST00000486210 SMCO2A6NFE2 343 aa19.99■□□□□ 0.79
MCF2L-226ENST00000486210 EYA4O95677 639 aa19.99■□□□□ 0.79
MCF2L-226ENST00000486210 IER5LQ5T953 404 aa19.99■□□□□ 0.79
MCF2L-226ENST00000486210 PCNX4Q63HM2 1172 aa19.99■□□□□ 0.79
MCF2L-226ENST00000486210 PPP1R18Q6NYC8 613 aa19.99■□□□□ 0.79
MCF2L-226ENST00000486210 CRIPAKQ8N1N5 446 aa19.99■□□□□ 0.79
MCF2L-226ENST00000486210 SPRYD3Q8NCJ5 442 aa19.99■□□□□ 0.79
MCF2L-226ENST00000486210 GIMAP8Q8ND71 665 aaPredicted RBP19.99■□□□□ 0.79
MCF2L-226ENST00000486210 WASF1Q92558 559 aa19.99■□□□□ 0.79
MCF2L-226ENST00000486210 INTS4Q96HW7 963 aaKnown RBP19.99■□□□□ 0.79
MCF2L-226ENST00000486210 CDHR1Q96JP9 859 aa19.99■□□□□ 0.79
MCF2L-226ENST00000486210 PLVAPQ9BX97 442 aa19.99■□□□□ 0.79
MCF2L-226ENST00000486210 CLEC1BQ9P126 229 aa19.99■□□□□ 0.79
MCF2L-226ENST00000486210 KCNJ14Q9UNX9 436 aa19.99■□□□□ 0.79
MCF2L-226ENST00000486210 MRPL42Q9Y6G3 142 aaKnown RBP19.99■□□□□ 0.79
MCF2L-226ENST00000486210 PIK3CDO00329 1044 aa19.98■□□□□ 0.79
MCF2L-226ENST00000486210 ITGB1P05556 798 aa19.98■□□□□ 0.79
MCF2L-226ENST00000486210 TCF7P36402 384 aaPredicted RBP19.98■□□□□ 0.79
MCF2L-226ENST00000486210 UBE2SQ16763 222 aa19.98■□□□□ 0.79
MCF2L-226ENST00000486210 MARCH8Q5T0T0 291 aa19.98■□□□□ 0.79
MCF2L-226ENST00000486210 TAF2Q6P1X5 1199 aa19.98■□□□□ 0.79
MCF2L-226ENST00000486210 USP17L6PQ6QN14 398 aa19.98■□□□□ 0.79
MCF2L-226ENST00000486210 BMP8AQ7Z5Y6 402 aa19.98■□□□□ 0.79
MCF2L-226ENST00000486210 RTN4RL1Q86UN2 441 aaPredicted RBP19.98■□□□□ 0.79
MCF2L-226ENST00000486210 FAM184AQ8NB25 1140 aa19.98■□□□□ 0.79
MCF2L-226ENST00000486210 DNAJB3Q8WWF6 145 aa19.98■□□□□ 0.79
MCF2L-226ENST00000486210 P2RX5Q93086 422 aa19.98■□□□□ 0.79
MCF2L-226ENST00000486210 PSTPIP2Q9H939 334 aa19.98■□□□□ 0.79
MCF2L-226ENST00000486210 AGO3Q9H9G7 860 aaKnown RBP19.98■□□□□ 0.79
MCF2L-226ENST00000486210 SH3GLB2Q9NR46 395 aa19.98■□□□□ 0.79
MCF2L-226ENST00000486210 CDY2AQ9Y6F7 541 aa19.98■□□□□ 0.79
MCF2L-226ENST00000486210 USP34Q70CQ2 3546 aa19.97■□□□□ 0.79
MCF2L-226ENST00000486210 MBLAC1A4D2B0 266 aaPredicted RBP19.97■□□□□ 0.79
MCF2L-226ENST00000486210 MEIS2O14770 477 aa19.97■□□□□ 0.79
MCF2L-226ENST00000486210 ATP9AO75110 1047 aa19.97■□□□□ 0.79
MCF2L-226ENST00000486210 NDUFV1P49821 464 aa19.97■□□□□ 0.79
MCF2L-226ENST00000486210 GUCY1B3Q02153 619 aa19.97■□□□□ 0.79
MCF2L-226ENST00000486210 NPY5RQ15761 445 aa19.97■□□□□ 0.79
MCF2L-226ENST00000486210 TSHZ1Q6ZSZ6 1077 aa19.97■□□□□ 0.79
MCF2L-226ENST00000486210 SPPL3Q8TCT6 385 aa19.97■□□□□ 0.79
MCF2L-226ENST00000486210 ZBTB10Q96DT7 871 aa19.97■□□□□ 0.79
MCF2L-226ENST00000486210 ZMYND12Q9H0C1 365 aa19.97■□□□□ 0.79
MCF2L-226ENST00000486210 RIC8AQ9NPQ8 531 aa19.97■□□□□ 0.79
MCF2L-226ENST00000486210 TUBE1Q9UJT0 475 aa19.97■□□□□ 0.79
MCF2L-226ENST00000486210 GSTTP1A0A1W2PQM5 241 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 ESYT2A0FGR8 921 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 SPDYE3A6NKU9 549 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 GLP2RO95838 553 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 KCNA2P16389 499 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 MARK3P27448 753 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 CD52P31358 61 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 ADCY7P51828 1080 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 NLRP5P59047 1200 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 PPFIA1Q13136 1202 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 BECN1Q14457 450 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 GRIK4Q16099 956 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 TRIM67Q6ZTA4 783 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 SMRP1Q8NCR6 262 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 CCDC148Q8NFR7 591 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 PHF20Q9BVI0 1012 aa19.96■□□□□ 0.79
MCF2L-226ENST00000486210 TMEM221A6NGB7 291 aa19.95■□□□□ 0.78
MCF2L-226ENST00000486210 LOC730098B7Z3J9 87 aa19.95■□□□□ 0.78
MCF2L-226ENST00000486210 M0R296 226 aa19.95■□□□□ 0.78
MCF2L-226ENST00000486210 CMTR2Q8IYT2 770 aaKnown RBP19.95■□□□□ 0.78
MCF2L-226ENST00000486210 EFHBQ8N7U6 833 aa19.95■□□□□ 0.78
MCF2L-226ENST00000486210 RASGRP4Q8TDF6 673 aa19.95■□□□□ 0.78
MCF2L-226ENST00000486210 CCDC12Q8WUD4 166 aaPredicted RBP19.95■□□□□ 0.78
MCF2L-226ENST00000486210 GPRASP2Q96D09 838 aa19.95■□□□□ 0.78
MCF2L-226ENST00000486210 C8orf76Q96K31 380 aa19.95■□□□□ 0.78
MCF2L-226ENST00000486210 TMEM260Q9NX78 707 aa19.95■□□□□ 0.78
MCF2L-226ENST00000486210 CLK2P49760 499 aaKnown RBP19.94■□□□□ 0.78
MCF2L-226ENST00000486210 MRPS6P82932 125 aaKnown RBP19.94■□□□□ 0.78
MCF2L-226ENST00000486210 ZXDAP98168 799 aa19.94■□□□□ 0.78
MCF2L-226ENST00000486210 TCF15Q12870 199 aa19.94■□□□□ 0.78
MCF2L-226ENST00000486210 COASYQ13057 564 aa19.94■□□□□ 0.78
MCF2L-226ENST00000486210 CBX2Q14781 532 aaPredicted RBP19.94■□□□□ 0.78
MCF2L-226ENST00000486210 NAALADL2Q58DX5 795 aa19.94■□□□□ 0.78
MCF2L-226ENST00000486210 RSPH3Q86UC2 560 aa19.94■□□□□ 0.78
MCF2L-226ENST00000486210 KLHL23Q8NBE8 558 aa19.94■□□□□ 0.78
MCF2L-226ENST00000486210 OXER1Q8TDS5 423 aa19.94■□□□□ 0.78
MCF2L-226ENST00000486210 POF1BQ8WVV4 589 aa19.94■□□□□ 0.78
MCF2L-226ENST00000486210 PBXIP1Q96AQ6 731 aa19.94■□□□□ 0.78
MCF2L-226ENST00000486210 SNX27Q96L92 541 aa19.94■□□□□ 0.78
MCF2L-226ENST00000486210 C6orf50Q9HD87 102 aa19.94■□□□□ 0.78
MCF2L-226ENST00000486210 ERAP1Q9NZ08 941 aa19.94■□□□□ 0.78
MCF2L-226ENST00000486210 PCDHA4Q9UN74 947 aa19.94■□□□□ 0.78
MCF2L-226ENST00000486210 PCDHGC5Q9Y5F6 944 aa19.94■□□□□ 0.78
MCF2L-226ENST00000486210 FNDC1Q4ZHG4 1894 aaPredicted RBP19.94■□□□□ 0.78
MCF2L-226ENST00000486210 HSP90AA1P07900 732 aaKnown RBP19.93■□□□□ 0.78
MCF2L-226ENST00000486210 XBP1P17861 261 aa19.93■□□□□ 0.78
MCF2L-226ENST00000486210 ANP32AP39687 249 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms