RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 ZNF577Q9BSK1 485 aa21.86■■□□□ 1.09
COL27A1-205ENST00000485397 IGFLR1Q9H665 355 aa21.86■■□□□ 1.09
COL27A1-205ENST00000485397 ERVK-5Q9HDB9 667 aa21.86■■□□□ 1.09
COL27A1-205ENST00000485397 NOC2LQ9Y3T9 749 aaKnown RBP21.86■■□□□ 1.09
COL27A1-205ENST00000485397 SNX14Q9Y5W7 946 aa21.86■■□□□ 1.09
COL27A1-205ENST00000485397 ATG2AQ2TAZ0 1938 aa21.86■■□□□ 1.09
COL27A1-205ENST00000485397 LOXHD1Q8IVV2 1947 aa21.85■■□□□ 1.09
COL27A1-205ENST00000485397 ZBTB42B2RXF5 422 aa21.85■■□□□ 1.09
COL27A1-205ENST00000485397 PRPF3O43395 683 aaKnown RBP21.85■■□□□ 1.09
COL27A1-205ENST00000485397 NCK2O43639 380 aa21.85■■□□□ 1.09
COL27A1-205ENST00000485397 MGEA5O60502 916 aa21.85■■□□□ 1.09
COL27A1-205ENST00000485397 PLA2G5P39877 138 aa21.85■■□□□ 1.09
COL27A1-205ENST00000485397 CLUL1Q15846 466 aa21.85■■□□□ 1.09
COL27A1-205ENST00000485397 ZNF484Q5JVG2 852 aa21.85■■□□□ 1.09
COL27A1-205ENST00000485397 BLOC1S2Q6QNY1 142 aa21.85■■□□□ 1.09
COL27A1-205ENST00000485397 RASGRP4Q8TDF6 673 aa21.85■■□□□ 1.09
COL27A1-205ENST00000485397 TMEM40Q8WWA1 233 aa21.85■■□□□ 1.09
COL27A1-205ENST00000485397 P2RX5Q93086 422 aa21.85■■□□□ 1.09
COL27A1-205ENST00000485397 PHKBQ93100 1093 aa21.85■■□□□ 1.09
COL27A1-205ENST00000485397 C6orf50Q9HD87 102 aa21.85■■□□□ 1.09
COL27A1-205ENST00000485397 COL1A2P08123 1366 aa21.85■■□□□ 1.09
COL27A1-205ENST00000485397 RPS6KA5O75582 802 aa21.84■■□□□ 1.09
COL27A1-205ENST00000485397 ITGB1P05556 798 aa21.84■■□□□ 1.09
COL27A1-205ENST00000485397 DNAJB1P25685 340 aa21.84■■□□□ 1.09
COL27A1-205ENST00000485397 HSPA4P34932 840 aa21.84■■□□□ 1.09
COL27A1-205ENST00000485397 TRMT1LQ7Z2T5 733 aaKnown RBP21.84■■□□□ 1.09
COL27A1-205ENST00000485397 CKAP2LQ8IYA6 745 aa21.84■■□□□ 1.09
COL27A1-205ENST00000485397 REXO1Q8N1G1 1221 aaKnown RBP21.84■■□□□ 1.09
COL27A1-205ENST00000485397 SPPL3Q8TCT6 385 aa21.84■■□□□ 1.09
COL27A1-205ENST00000485397 FAM122AQ96E09 287 aa21.84■■□□□ 1.09
COL27A1-205ENST00000485397 PPP1R16BQ96T49 567 aa21.84■■□□□ 1.09
COL27A1-205ENST00000485397 TBC1D22BQ9NU19 505 aa21.84■■□□□ 1.09
COL27A1-205ENST00000485397 LRFN2Q9ULH4 789 aa21.84■■□□□ 1.09
COL27A1-205ENST00000485397 LINC01565O15544 149 aa21.83■■□□□ 1.09
COL27A1-205ENST00000485397 SARSP49591 514 aaKnown RBP21.83■■□□□ 1.09
COL27A1-205ENST00000485397 KLHL23Q8NBE8 558 aa21.83■■□□□ 1.09
COL27A1-205ENST00000485397 CCDC12Q8WUD4 166 aaPredicted RBP21.83■■□□□ 1.09
COL27A1-205ENST00000485397 ST3GAL5Q9UNP4 418 aa21.83■■□□□ 1.09
COL27A1-205ENST00000485397 FAM50BQ9Y247 325 aa21.83■■□□□ 1.09
COL27A1-205ENST00000485397 MAFBQ9Y5Q3 323 aaPredicted RBP21.83■■□□□ 1.09
COL27A1-205ENST00000485397 C22orf31O95567 290 aa21.82■■□□□ 1.08
COL27A1-205ENST00000485397 RPS6KB1P23443 525 aa21.82■■□□□ 1.08
COL27A1-205ENST00000485397 IRS1P35568 1242 aa21.82■■□□□ 1.08
COL27A1-205ENST00000485397 SETQ01105 290 aaPredicted RBP21.82■■□□□ 1.08
COL27A1-205ENST00000485397 ZP2Q05996 745 aa21.82■■□□□ 1.08
COL27A1-205ENST00000485397 NTRK3Q16288 839 aa21.82■■□□□ 1.08
COL27A1-205ENST00000485397 PRR16Q569H4 304 aa21.82■■□□□ 1.08
COL27A1-205ENST00000485397 NAALADL2Q58DX5 795 aa21.82■■□□□ 1.08
COL27A1-205ENST00000485397 ZNF746Q6NUN9 644 aaPredicted RBP21.82■■□□□ 1.08
COL27A1-205ENST00000485397 BBXQ8WY36 941 aaPredicted RBP21.82■■□□□ 1.08
COL27A1-205ENST00000485397 ADAM2Q99965 735 aa21.82■■□□□ 1.08
COL27A1-205ENST00000485397 HCN4Q9Y3Q4 1203 aa21.82■■□□□ 1.08
COL27A1-205ENST00000485397 PCDHB7Q9Y5E2 793 aa21.82■■□□□ 1.08
COL27A1-205ENST00000485397 NID2Q14112 1375 aa21.82■■□□□ 1.08
COL27A1-205ENST00000485397 TBX10O75333 385 aa21.81■■□□□ 1.08
COL27A1-205ENST00000485397 GNA11P29992 359 aa21.81■■□□□ 1.08
COL27A1-205ENST00000485397 CIITAP33076 1130 aa21.81■■□□□ 1.08
COL27A1-205ENST00000485397 AKAP17AQ02040 695 aaKnown RBP21.81■■□□□ 1.08
COL27A1-205ENST00000485397 KIZQ2M2Z5 673 aa21.81■■□□□ 1.08
COL27A1-205ENST00000485397 MCTP2Q6DN12 878 aa21.81■■□□□ 1.08
COL27A1-205ENST00000485397 ADGRD2Q7Z7M1 963 aa21.81■■□□□ 1.08
COL27A1-205ENST00000485397 POF1BQ8WVV4 589 aa21.81■■□□□ 1.08
COL27A1-205ENST00000485397 OSMRQ99650 979 aa21.81■■□□□ 1.08
COL27A1-205ENST00000485397 GABBR1Q9UBS5 961 aa21.81■■□□□ 1.08
COL27A1-205ENST00000485397 PRKAG3Q9UGI9 489 aa21.81■■□□□ 1.08
COL27A1-205ENST00000485397 PCDHA10Q9Y5I2 948 aa21.81■■□□□ 1.08
COL27A1-205ENST00000485397 DENND3A2RUS2 1198 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 C19orf67A6NJJ6 358 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 MBTPS2O43462 519 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 EDIL3O43854 480 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 VTNP04004 478 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 PSAPP07602 524 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 ADAM15Q13444 863 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 FAM102BQ5T8I3 360 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 FAM228AQ86W67 206 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 ADHFE1Q8IWW8 467 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 SMAP1Q8IYB5 467 aaPredicted RBP21.8■■□□□ 1.08
COL27A1-205ENST00000485397 FBXL16Q8N461 479 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 METTL13Q8N6R0 699 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 LENG9Q96B70 501 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 SLC26A6Q9BXS9 759 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 AGXT2Q9BYV1 514 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 RGS18Q9NS28 235 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 VPS54Q9P1Q0 977 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 EVPLQ92817 2033 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 KIAA1671Q9BY89 1806 aa21.8■■□□□ 1.08
COL27A1-205ENST00000485397 TBKBP1A7MCY6 615 aa21.79■■□□□ 1.08
COL27A1-205ENST00000485397 C9IYK1 514 aa21.79■■□□□ 1.08
COL27A1-205ENST00000485397 GPR182O15218 404 aa21.79■■□□□ 1.08
COL27A1-205ENST00000485397 GPR32O75388 356 aa21.79■■□□□ 1.08
COL27A1-205ENST00000485397 ALADP13716 330 aa21.79■■□□□ 1.08
COL27A1-205ENST00000485397 CRYBB1P53674 252 aaPredicted RBP21.79■■□□□ 1.08
COL27A1-205ENST00000485397 CCT2P78371 535 aaKnown RBP21.79■■□□□ 1.08
COL27A1-205ENST00000485397 SMAD2Q15796 467 aaKnown RBP21.79■■□□□ 1.08
COL27A1-205ENST00000485397 SLC24A5Q71RS6 500 aa21.79■■□□□ 1.08
COL27A1-205ENST00000485397 RNF26Q9BY78 433 aaPredicted RBP21.79■■□□□ 1.08
COL27A1-205ENST00000485397 NCOA5Q9HCD5 579 aaKnown RBP21.79■■□□□ 1.08
COL27A1-205ENST00000485397 C1orf112Q9NSG2 853 aa21.79■■□□□ 1.08
COL27A1-205ENST00000485397 HCSTQ9UBK5 93 aa21.79■■□□□ 1.08
COL27A1-205ENST00000485397 TCEAL9Q9UHQ7 104 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms