RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.79□□□□□ -13e-9■■■□□ 17.6
MACF1-220ENST00000485063 TTC12Q9H892 705 aaPredicted RBP8.79□□□□□ -1
MACF1-220ENST00000485063 IGSF9BQ9UPX0 1349 aa8.79□□□□□ -1
MACF1-220ENST00000485063 SMIM35A0A1B0GVV1 85 aa8.78□□□□□ -1
MACF1-220ENST00000485063 MBLAC1A4D2B0 266 aaPredicted RBP8.78□□□□□ -1
MACF1-220ENST00000485063 ZBBXA8MT70 800 aa8.78□□□□□ -1
MACF1-220ENST00000485063 MAGEB2O15479 319 aa8.78□□□□□ -1
MACF1-220ENST00000485063 OATP04181 439 aa8.78□□□□□ -1
MACF1-220ENST00000485063 P4HBP07237 508 aaKnown RBP8.78□□□□□ -1
MACF1-220ENST00000485063 KLRC1P26715 233 aa8.78□□□□□ -1
MACF1-220ENST00000485063 TMOD1P28289 359 aa8.78□□□□□ -1
MACF1-220ENST00000485063 TXKP42681 527 aa8.78□□□□□ -1
MACF1-220ENST00000485063 QARSP47897 775 aaKnown RBP8.78□□□□□ -1
MACF1-220ENST00000485063 PSMC5P62195 406 aa8.78□□□□□ -1
MACF1-220ENST00000485063 PRKCEQ02156 737 aa8.78□□□□□ -1
MACF1-220ENST00000485063 HIC1Q14526 733 aa8.78□□□□□ -1
MACF1-220ENST00000485063 EPHA7Q15375 998 aa8.78□□□□□ -1
MACF1-220ENST00000485063 ZNF174Q15697 407 aa8.78□□□□□ -1
MACF1-220ENST00000485063 TMEM266Q2M3C6 531 aa8.78□□□□□ -1
MACF1-220ENST00000485063 RILPL1Q5EBL4 403 aa8.78□□□□□ -1
MACF1-220ENST00000485063 TMEM240Q5SV17 173 aa8.78□□□□□ -1
MACF1-220ENST00000485063 C9orf50Q5SZB4 431 aa8.78□□□□□ -1
MACF1-220ENST00000485063 IER5Q5VY09 327 aa8.78□□□□□ -1
MACF1-220ENST00000485063 MTHFD1LQ6UB35 978 aa8.78□□□□□ -1
MACF1-220ENST00000485063 OTUD6AQ7L8S5 288 aa8.78□□□□□ -1
MACF1-220ENST00000485063 OTOP2Q7RTS6 562 aa8.78□□□□□ -1
MACF1-220ENST00000485063 RPAINQ86UA6 219 aa8.78□□□□□ -1
MACF1-220ENST00000485063 NME8Q8N427 588 aa8.78□□□□□ -1
MACF1-220ENST00000485063 NEK9Q8TD19 979 aa8.78□□□□□ -1
MACF1-220ENST00000485063 DNAJB3Q8WWF6 145 aa8.78□□□□□ -1
MACF1-220ENST00000485063 HERVK_113Q902F9 699 aa8.78□□□□□ -1
MACF1-220ENST00000485063 DHX38Q92620 1227 aaKnown RBP8.78□□□□□ -1
MACF1-220ENST00000485063 HAS1Q92839 578 aa8.78□□□□□ -1
MACF1-220ENST00000485063 SNX21Q969T3 373 aa8.78□□□□□ -1
MACF1-220ENST00000485063 CTAGE1Q96RT6 745 aa8.78□□□□□ -1
MACF1-220ENST00000485063 SEPT9Q9UHD8 586 aaPredicted RBP8.78□□□□□ -1
MACF1-220ENST00000485063 PCDHA2Q9Y5H9 948 aa8.78□□□□□ -1
MACF1-220ENST00000485063 STK24Q9Y6E0 443 aa8.78□□□□□ -1
MACF1-220ENST00000485063 EVPLQ92817 2033 aa8.78□□□□□ -1
MACF1-220ENST00000485063 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.77□□□□□ -1.01
MACF1-220ENST00000485063 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.77□□□□□ -1.01
MACF1-220ENST00000485063 VPS37CA5D8V6 355 aaPredicted RBP8.77□□□□□ -1.01
MACF1-220ENST00000485063 LAD1O00515 517 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 EFCAB14O75071 495 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 BAIAP3O94812 1187 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 CTSHP09668 335 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 OR52Z1P0C646 297 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 PDIA4P13667 645 aaKnown RBP8.77□□□□□ -1.01
MACF1-220ENST00000485063 KCNJ6P48051 423 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 EPHB4P54760 987 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 TBC1D8BQ0IIM8 1120 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 IKBKEQ14164 716 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 TRIM71Q2Q1W2 868 aaKnown RBP8.77□□□□□ -1.01
MACF1-220ENST00000485063 XKR3Q5GH77 459 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 ODR4Q5SWX8 454 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 MARCH8Q5T0T0 291 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 CNKSR3Q6P9H4 555 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 B3GNT9Q6UX72 402 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 EXOC8Q8IYI6 725 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 METTL13Q8N6R0 699 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 BANK1Q8NDB2 785 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 ERMNQ8TAM6 284 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 TRAPPC12Q8WVT3 735 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 CCDC43Q96MW1 224 aaKnown RBP8.77□□□□□ -1.01
MACF1-220ENST00000485063 JPH2Q9BR39 696 aaPredicted RBP8.77□□□□□ -1.01
MACF1-220ENST00000485063 MFRPQ9BY79 579 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 RAB34Q9BZG1 259 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 FAM49AQ9H0Q0 323 aaPredicted RBP8.77□□□□□ -1.01
MACF1-220ENST00000485063 VAV3Q9UKW4 847 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 SLC4A7Q9Y6M7 1214 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 DNAH12Q6ZR08 3092 aa8.77□□□□□ -1.01
MACF1-220ENST00000485063 LOXHD1Q8IVV2 1947 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 ABHD14A-ACY1A0A1B0GW23 586 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 DDX11L8A8MPP1 907 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 KIF28PB7ZC32 967 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 EML1O00423 815 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 CXCL10P02778 98 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 ATP4AP20648 1035 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 TECP42680 631 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 DNM2P50570 870 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 MRPS6P82932 125 aaKnown RBP8.76□□□□□ -1.01
MACF1-220ENST00000485063 SMAD3P84022 425 aaKnown RBP8.76□□□□□ -1.01
MACF1-220ENST00000485063 UGCGQ16739 394 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 MTERF2Q49AM1 385 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 FAM26DQ5JW98 314 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 RUFY4Q6ZNE9 571 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 C16orf59Q7L2K0 433 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 BRAPQ7Z569 592 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 TPH2Q8IWU9 490 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 C4orf19Q8IY42 314 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 USP38Q8NB14 1042 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 SEPT8Q92599 483 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 APBB2Q92870 758 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 WNT8BQ93098 351 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 MTMR9Q96QG7 549 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 MAP7D2Q96T17 732 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 SLC9A7Q96T83 725 aa8.76□□□□□ -1.01
MACF1-220ENST00000485063 EIF2AK1Q9BQI3 630 aaKnown RBP8.76□□□□□ -1.01
MACF1-220ENST00000485063 NIFKQ9BYG3 293 aaKnown RBP8.76□□□□□ -1.01
MACF1-220ENST00000485063 ZSWIM4Q9H7M6 989 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms