RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ZBTB42B2RXF5 422 aa13□□□□□ -0.33
SCFD1-206ENST00000484733 PI4K2BG5E9Z4 385 aa13□□□□□ -0.33
SCFD1-206ENST00000484733 GRM6O15303 877 aa13□□□□□ -0.33
SCFD1-206ENST00000484733 SARSP49591 514 aaKnown RBP13□□□□□ -0.33
SCFD1-206ENST00000484733 AKAP17AQ02040 695 aaKnown RBP13□□□□□ -0.33
SCFD1-206ENST00000484733 TMEM62Q0P6H9 643 aa13□□□□□ -0.33
SCFD1-206ENST00000484733 CTC1Q2NKJ3 1217 aa13□□□□□ -0.33
SCFD1-206ENST00000484733 PSAPP07602 524 aa13□□□□□ -0.33
SCFD1-206ENST00000484733 PDIA3P30101 505 aaKnown RBP13□□□□□ -0.33
SCFD1-206ENST00000484733 ZNF710Q8N1W2 664 aa13□□□□□ -0.33
SCFD1-206ENST00000484733 C1orf112Q9NSG2 853 aa13□□□□□ -0.33
SCFD1-206ENST00000484733 FAM50BQ9Y247 325 aa13□□□□□ -0.33
SCFD1-206ENST00000484733 PCDHA10Q9Y5I2 948 aa13□□□□□ -0.33
SCFD1-206ENST00000484733 MRPL42Q9Y6G3 142 aaKnown RBP13□□□□□ -0.33
SCFD1-206ENST00000484733 KIAA1671Q9BY89 1806 aa13□□□□□ -0.33
SCFD1-206ENST00000484733 C22orf31O95567 290 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 USP11P51784 963 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 CRYBB1P53674 252 aaPredicted RBP12.99□□□□□ -0.33
SCFD1-206ENST00000484733 FAM177A1Q8N128 213 aaPredicted RBP12.99□□□□□ -0.33
SCFD1-206ENST00000484733 PHKBQ93100 1093 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 CD320Q9NPF0 282 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 RGS18Q9NS28 235 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 TCEAL9Q9UHQ7 104 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 PLAGL2Q9UPG8 496 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 ARIH1Q9Y4X5 557 aaPredicted RBP12.99□□□□□ -0.33
SCFD1-206ENST00000484733 GPR182O15218 404 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 MAGEB2O15479 319 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 GPR37L1O60883 481 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 RPS6KA5O75582 802 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 IL9P15248 144 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 LENG9Q96B70 501 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 FAM167AQ96KS9 214 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 CDHR5Q9HBB8 845 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 ZSWIM6Q9HCJ5 1215 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 PRKAG3Q9UGI9 489 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 CEP131Q9UPN4 1083 aa12.99□□□□□ -0.33
SCFD1-206ENST00000484733 NOC2LQ9Y3T9 749 aaKnown RBP12.99□□□□□ -0.33
SCFD1-206ENST00000484733 MYH9P35579 1960 aaKnown RBP12.99□□□□□ -0.33
SCFD1-206ENST00000484733 EDIL3O43854 480 aa12.98□□□□□ -0.33
SCFD1-206ENST00000484733 LTBRP36941 435 aa12.98□□□□□ -0.33
SCFD1-206ENST00000484733 HYAL1Q12794 435 aa12.98□□□□□ -0.33
SCFD1-206ENST00000484733 PRR16Q569H4 304 aa12.98□□□□□ -0.33
SCFD1-206ENST00000484733 RUFY3Q7L099 469 aa12.98□□□□□ -0.33
SCFD1-206ENST00000484733 GJD3Q8N144 294 aa12.98□□□□□ -0.33
SCFD1-206ENST00000484733 SPPL3Q8TCT6 385 aa12.98□□□□□ -0.33
SCFD1-206ENST00000484733 CCDC136Q96JN2 1154 aa12.98□□□□□ -0.33
SCFD1-206ENST00000484733 RIT2Q99578 217 aa12.98□□□□□ -0.33
SCFD1-206ENST00000484733 LRFN3Q9BTN0 628 aa12.98□□□□□ -0.33
SCFD1-206ENST00000484733 SLC26A6Q9BXS9 759 aa12.98□□□□□ -0.33
SCFD1-206ENST00000484733 C22orf23Q9BZE7 217 aa12.98□□□□□ -0.33
SCFD1-206ENST00000484733 LRFN2Q9ULH4 789 aa12.98□□□□□ -0.33
SCFD1-206ENST00000484733 EVPLQ92817 2033 aa12.98□□□□□ -0.33
SCFD1-206ENST00000484733 GPR32O75388 356 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 FAM189BP81408 668 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 CAMK1Q14012 370 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 TMEM31Q5JXX7 168 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 LINC01465Q8N7H1 131 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 KHSRPQ92945 711 aaKnown RBP eCLIP12.97□□□□□ -0.331e-7■■■□□ 15
SCFD1-206ENST00000484733 ZNF274Q96GC6 653 aaPredicted RBP12.97□□□□□ -0.33
SCFD1-206ENST00000484733 TM6SF1Q9BZW5 370 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 ELAC1Q9H777 363 aaKnown RBP12.97□□□□□ -0.33
SCFD1-206ENST00000484733 GABBR1Q9UBS5 961 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 ST3GAL5Q9UNP4 418 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 PCDHB7Q9Y5E2 793 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 NCOR1O75376 2440 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 WDR81Q562E7 1941 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 C19orf67A6NJJ6 358 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 WDR64B1ANS9 1081 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 C9IYK1 514 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 MGEA5O60502 916 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 NFX1Q12986 1120 aaKnown RBP12.97□□□□□ -0.33
SCFD1-206ENST00000484733 TOB2Q14106 344 aaPredicted RBP12.97□□□□□ -0.33
SCFD1-206ENST00000484733 DSC3Q14574 896 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 SLC24A5Q71RS6 500 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 CKAP2LQ8IYA6 745 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 TMEM40Q8WWA1 233 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 SLC5A5Q92911 643 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 NRBP2Q9NSY0 501 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 CLDND1Q9NY35 253 aa12.97□□□□□ -0.33
SCFD1-206ENST00000484733 FNDC1Q4ZHG4 1894 aaPredicted RBP12.97□□□□□ -0.33
SCFD1-206ENST00000484733 H3BQ06 376 aaPredicted RBP12.96□□□□□ -0.33
SCFD1-206ENST00000484733 ITGB1P05556 798 aa12.96□□□□□ -0.33
SCFD1-206ENST00000484733 SFNP31947 248 aa12.96□□□□□ -0.33
SCFD1-206ENST00000484733 ADAM15Q13444 863 aa12.96□□□□□ -0.33
SCFD1-206ENST00000484733 TMEM266Q2M3C6 531 aa12.96□□□□□ -0.33
SCFD1-206ENST00000484733 RDM1Q8NG50 284 aa12.96□□□□□ -0.33
SCFD1-206ENST00000484733 RASGRP4Q8TDF6 673 aa12.96□□□□□ -0.33
SCFD1-206ENST00000484733 ADAM2Q99965 735 aa12.96□□□□□ -0.33
SCFD1-206ENST00000484733 VPS54Q9P1Q0 977 aa12.96□□□□□ -0.33
SCFD1-206ENST00000484733 CYP3A7-CYP3A51PA0A087WV96 503 aa12.96□□□□□ -0.34
SCFD1-206ENST00000484733 MSH4O15457 936 aa12.96□□□□□ -0.34
SCFD1-206ENST00000484733 CYP3A7P24462 503 aa12.96□□□□□ -0.34
SCFD1-206ENST00000484733 CCT2P78371 535 aaKnown RBP12.96□□□□□ -0.34
SCFD1-206ENST00000484733 UBE3AQ05086 875 aa12.96□□□□□ -0.34
SCFD1-206ENST00000484733 SSRP1Q08945 709 aaKnown RBP12.96□□□□□ -0.34
SCFD1-206ENST00000484733 Q4G0T1 1027 aa12.96□□□□□ -0.34
SCFD1-206ENST00000484733 FAM228AQ86W67 206 aa12.96□□□□□ -0.34
SCFD1-206ENST00000484733 TRIM22Q8IYM9 498 aa12.96□□□□□ -0.34
SCFD1-206ENST00000484733 KLHL23Q8NBE8 558 aa12.96□□□□□ -0.34
SCFD1-206ENST00000484733 PPP2R3CQ969Q6 453 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms