RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 DAGLBQ8NCG7 672 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 SEPT1Q8WYJ6 367 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 CLP1Q92989 425 aaKnown RBP11.35□□□□□ -0.59
CPSF4-213ENST00000484112 ZNF689Q96CS4 500 aaPredicted RBP11.35□□□□□ -0.59
CPSF4-213ENST00000484112 ZBTB10Q96DT7 871 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 TBC1D32Q96NH3 1257 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 ANO3Q9BYT9 981 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 BACH2Q9BYV9 841 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 FAM49AQ9H0Q0 323 aaPredicted RBP11.35□□□□□ -0.59
CPSF4-213ENST00000484112 TUBE1Q9UJT0 475 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 PCDHA4Q9UN74 947 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 PLAGL2Q9UPG8 496 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 UBIAD1Q9Y5Z9 338 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 MRPL42Q9Y6G3 142 aaKnown RBP11.35□□□□□ -0.59
CPSF4-213ENST00000484112 NLRC5Q86WI3 1866 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 GSTTP1A0A1W2PQM5 241 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 PPFIA3O75145 1194 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 DNAJB1P25685 340 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 CD52P31358 61 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 NLRP5P59047 1200 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 TMEM62Q0P6H9 643 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 MTMR1Q13613 665 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 CAMK1Q14012 370 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 UBE2SQ16763 222 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 HERC4Q5GLZ8 1057 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-213ENST00000484112 TSHZ1Q6ZSZ6 1077 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 ADGRD2Q7Z7M1 963 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 CRYGNQ8WXF5 182 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 EDAQ92838 391 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 PPP2R3CQ969Q6 453 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 LARP6Q9BRS8 491 aaKnown RBP11.34□□□□□ -0.59
CPSF4-213ENST00000484112 PLVAPQ9BX97 442 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 AGO3Q9H9G7 860 aaKnown RBP11.34□□□□□ -0.59
CPSF4-213ENST00000484112 RC3H2Q9HBD1 1191 aaKnown RBP11.34□□□□□ -0.59
CPSF4-213ENST00000484112 JADE2Q9NQC1 790 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 ERAP1Q9NZ08 941 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 DOCK5Q9H7D0 1870 aa11.34□□□□□ -0.59
CPSF4-213ENST00000484112 MYO7AQ13402 2215 aa11.33□□□□□ -0.59
CPSF4-213ENST00000484112 COL4A6Q14031 1691 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 ITGB1P05556 798 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 KCNA2P16389 499 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 NRIP1P48552 1158 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 USP11P51784 963 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 MRPS6P82932 125 aaKnown RBP11.33□□□□□ -0.6
CPSF4-213ENST00000484112 HMGN5P82970 282 aaKnown RBP11.33□□□□□ -0.6
CPSF4-213ENST00000484112 SETQ01105 290 aaPredicted RBP11.33□□□□□ -0.6
CPSF4-213ENST00000484112 CEP55Q53EZ4 464 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 MARCH8Q5T0T0 291 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 RTN4RL1Q86UN2 441 aaPredicted RBP11.33□□□□□ -0.6
CPSF4-213ENST00000484112 KLHL23Q8NBE8 558 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 SPPL3Q8TCT6 385 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 MICAL1Q8TDZ2 1067 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 POF1BQ8WVV4 589 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 PBXIP1Q96AQ6 731 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 PHOX2BQ99453 314 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 MXRA8Q9BRK3 442 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 SMARCAD1Q9H4L7 1026 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 VPS54Q9P1Q0 977 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 ORC3Q9UBD5 711 aaPredicted RBP11.33□□□□□ -0.6
CPSF4-213ENST00000484112 RALGAPA2Q2PPJ7 1873 aa11.33□□□□□ -0.6
CPSF4-213ENST00000484112 TMEM221A6NGB7 291 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 M0QZ92 97 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 M0R296 226 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 MEIS1O00470 390 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 CTDNEP1O95476 244 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 STAG3L1P0CL83 205 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 INSRRP14616 1297 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 ITGB5P18084 799 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 CIITAP33076 1130 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 GATMP50440 423 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 SPOUT1Q5T280 376 aaKnown RBP11.32□□□□□ -0.6
CPSF4-213ENST00000484112 IER5LQ5T953 404 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 IER5Q5VY09 327 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 MOXD1Q6UVY6 613 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 NPAS4Q8IUM7 802 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 CMTR2Q8IYT2 770 aaKnown RBP11.32□□□□□ -0.6
CPSF4-213ENST00000484112 BLIDQ8IZY5 108 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 NSUN7Q8NE18 718 aaKnown RBP11.32□□□□□ -0.6
CPSF4-213ENST00000484112 LINC01599Q8WXQ3 324 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 P2RX5Q93086 422 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 NAP1L4Q99733 375 aaKnown RBP11.32□□□□□ -0.6
CPSF4-213ENST00000484112 PHF20Q9BVI0 1012 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 BRMS1Q9HCU9 246 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 CLEC1BQ9P126 229 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 LRFN2Q9ULH4 789 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 BARX2Q9UMQ3 279 aaPredicted RBP11.32□□□□□ -0.6
CPSF4-213ENST00000484112 TRPC6Q9Y210 931 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 PCDHGC5Q9Y5F6 944 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 NFASCO94856 1347 aa11.32□□□□□ -0.6
CPSF4-213ENST00000484112 MBLAC1A4D2B0 266 aaPredicted RBP11.31□□□□□ -0.6
CPSF4-213ENST00000484112 RRN3P2A6NIE6 340 aa11.31□□□□□ -0.6
CPSF4-213ENST00000484112 M0R2N6 131 aa11.31□□□□□ -0.6
CPSF4-213ENST00000484112 PER2O15055 1255 aa11.31□□□□□ -0.6
CPSF4-213ENST00000484112 LARGE1O95461 756 aa11.31□□□□□ -0.6
CPSF4-213ENST00000484112 ZNF76P36508 570 aa11.31□□□□□ -0.6
CPSF4-213ENST00000484112 NFX1Q12986 1120 aaKnown RBP11.31□□□□□ -0.6
CPSF4-213ENST00000484112 PAK2Q13177 524 aa11.31□□□□□ -0.6
CPSF4-213ENST00000484112 TRIM29Q14134 588 aa11.31□□□□□ -0.6
CPSF4-213ENST00000484112 NAALADL2Q58DX5 795 aa11.31□□□□□ -0.6
CPSF4-213ENST00000484112 JAKMIP3Q5VZ66 844 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms