RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 KCND2Q9NZV8 630 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 TBC1D7Q9P0N9 293 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 ZSWIM8A7E2V4 1837 aa11.21□□□□□ -0.62
HDAC6-226ENST00000483656 TNPO2O14787 897 aaKnown RBP11.2□□□□□ -0.62
HDAC6-226ENST00000483656 ADCY6O43306 1168 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 DKC1O60832 514 aaKnown RBP eCLIP11.2□□□□□ -0.62
HDAC6-226ENST00000483656 HIP1RO75146 1068 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 TBC1D8O95759 1140 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 SMPD1P17405 629 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 CYP2B6P20813 491 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 HOXD13P35453 343 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 TCF7P36402 384 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-226ENST00000483656 VEGFBP49765 207 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 CASP5P51878 434 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 HTRA3P83110 453 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 PLCB2Q00722 1185 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 CCDC173Q0VFZ6 552 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 XKR9Q5GH70 373 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 XKR3Q5GH77 459 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 PRAMEF19Q5SWL8 479 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 CDKAL1Q5VV42 579 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 ANKRD40Q6AI12 368 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 CENPPQ6IPU0 288 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 IRF2BP1Q8IU81 584 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 SCFD1Q8WVM8 642 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 P2RX5Q93086 422 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 TRIM47Q96LD4 638 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 SPATA33Q96N06 139 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 CEP89Q96ST8 783 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 CFHR5Q9BXR6 569 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 ABHD16BQ9H3Z7 469 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 ZHX3Q9H4I2 956 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 SLC5A4Q9NY91 659 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 ODF2LQ9ULJ1 636 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 COL4A3BPQ9Y5P4 624 aa11.2□□□□□ -0.62
HDAC6-226ENST00000483656 PSMA7O14818 248 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 USO1O60763 962 aaKnown RBP11.19□□□□□ -0.62
HDAC6-226ENST00000483656 TBCAO75347 108 aaKnown RBP11.19□□□□□ -0.62
HDAC6-226ENST00000483656 FAM13AO94988 1023 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 GH1P01241 217 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 OATP04181 439 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 ZNF865P0CJ78 1059 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-226ENST00000483656 HSPA1AP0DMV8 641 aaKnown RBP11.19□□□□□ -0.62
HDAC6-226ENST00000483656 HSPA1BP0DMV9 641 aaKnown RBP11.19□□□□□ -0.62
HDAC6-226ENST00000483656 MYBP10242 640 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 GAP43P17677 238 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 RGS2P41220 211 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 PPP1R2P41236 205 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 PSMC4P43686 418 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 STAT5BP51692 787 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 LACTBP83111 547 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-226ENST00000483656 FANCCQ00597 558 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 STIM1Q13586 685 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 LAMC2Q13753 1193 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 HSP90AA4PQ58FG1 418 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 OLFML2BQ68BL8 750 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 OTUD6AQ7L8S5 288 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 APTXQ7Z2E3 356 aaKnown RBP11.19□□□□□ -0.62
HDAC6-226ENST00000483656 TRMT1LQ7Z2T5 733 aaKnown RBP11.19□□□□□ -0.62
HDAC6-226ENST00000483656 MYOCDQ8IZQ8 938 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 SOCS4Q8WXH5 440 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 EMID1Q96A84 441 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-226ENST00000483656 NIFKQ9BYG3 293 aaKnown RBP11.19□□□□□ -0.62
HDAC6-226ENST00000483656 XPNPEP1Q9NQW7 623 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 OLFML3Q9NRN5 406 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 RNF186Q9NXI6 227 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 GABRQQ9UN88 632 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 LOXHD1Q8IVV2 1947 aa11.19□□□□□ -0.62
HDAC6-226ENST00000483656 NMT1P30419 496 aaKnown RBP11.18□□□□□ -0.62
HDAC6-226ENST00000483656 CYP2C19P33261 490 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 MAP2K2P36507 400 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 FCGRTP55899 365 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 TPM4P67936 248 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 IRF5Q13568 498 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 TARBP2Q15633 366 aaKnown RBP11.18□□□□□ -0.62
HDAC6-226ENST00000483656 BMT2Q1RMZ1 405 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 CCDC144BQ3MJ40 725 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 DUSP28Q4G0W2 176 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 ZCWPW2Q504Y3 356 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 FAM160B1Q5W0V3 765 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 IQSEC1Q6DN90 963 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 MAEAQ7L5Y9 396 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 PLPPR4Q7Z2D5 763 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 TRIM50Q86XT4 487 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 MYCT1Q8N699 235 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 ZNF507Q8TCN5 953 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 ANP32BQ92688 251 aaKnown RBP11.18□□□□□ -0.62
HDAC6-226ENST00000483656 CEP170P1Q96L14 293 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 NAP1L5Q96NT1 182 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-226ENST00000483656 APBA2Q99767 749 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 STRA6Q9BX79 667 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 TRIM5Q9C035 493 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 KCTD10Q9H3F6 313 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 PARVGQ9HBI0 331 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 GPRC5CQ9NQ84 441 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 CYP26B1Q9NR63 512 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 IFNKQ9P0W0 207 aa11.18□□□□□ -0.62
HDAC6-226ENST00000483656 SEPT9Q9UHD8 586 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-226ENST00000483656 ZHX1Q9UKY1 873 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-226ENST00000483656 MGAMO43451 1857 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms