RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 LONRF2Q1L5Z9 754 aa4.85□□□□□ -1.63
LAPTM4A-202ENST00000483117 USP39Q53GS9 565 aaKnown RBP4.85□□□□□ -1.63
LAPTM4A-202ENST00000483117 USP51Q70EK9 711 aa4.85□□□□□ -1.63
LAPTM4A-202ENST00000483117 CXXC5Q7LFL8 322 aaKnown RBP4.85□□□□□ -1.63
LAPTM4A-202ENST00000483117 OTOP2Q7RTS6 562 aa4.85□□□□□ -1.63
LAPTM4A-202ENST00000483117 FILIP1Q7Z7B0 1213 aa4.85□□□□□ -1.63
LAPTM4A-202ENST00000483117 GSTCDQ8NEC7 633 aa4.85□□□□□ -1.63
LAPTM4A-202ENST00000483117 CFHR4Q92496 578 aa4.85□□□□□ -1.63
LAPTM4A-202ENST00000483117 EDAQ92838 391 aa4.85□□□□□ -1.63
LAPTM4A-202ENST00000483117 EXTL1Q92935 676 aa4.85□□□□□ -1.63
LAPTM4A-202ENST00000483117 DEPDC7Q96QD5 511 aa4.85□□□□□ -1.63
LAPTM4A-202ENST00000483117 SNTG2Q9NY99 539 aa4.85□□□□□ -1.63
LAPTM4A-202ENST00000483117 ING1Q9UK53 422 aaPredicted RBP4.85□□□□□ -1.63
LAPTM4A-202ENST00000483117 FBXO10Q9UK96 956 aa4.85□□□□□ -1.63
LAPTM4A-202ENST00000483117 PRAMEF22A3QJZ6 481 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 RASSF10A6NK89 507 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 NPIPB8E9PQR5 432 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 PLSCR1O15162 318 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 FOXE3Q13461 319 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 MOGSQ13724 837 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 NFYCQ13952 458 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 EIF4HQ15056 248 aaKnown RBP4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 KANK2Q63ZY3 851 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 RNF207Q6ZRF8 634 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 USP30Q70CQ3 517 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 POLNQ7Z5Q5 900 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 ASB15Q8WXK1 588 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 SCLYQ96I15 445 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 GBP4Q96PP9 640 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 DNAJC7Q99615 494 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 HIRIP3Q9BW71 556 aaPredicted RBP4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 PCED1AQ9H1Q7 454 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 SLC30A1Q9Y6M5 507 aa4.84□□□□□ -1.63
LAPTM4A-202ENST00000483117 A0A0G2JNJ9 132 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 EFCAB14O75071 495 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 MRE11P49959 708 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 STAT5BP51692 787 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 DGCR2P98153 550 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 MIIPQ5JXC2 388 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 TMEM200BQ69YZ2 307 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 TRIM68Q6AZZ1 485 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 IGFL4Q6B9Z1 124 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 OVCH1Q7RTY7 1134 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 ZNF808Q8N4W9 903 aaPredicted RBP4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 HIPK4Q8NE63 616 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 OR14K1Q8NGZ2 314 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 WDR48Q8TAF3 677 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 ZNF503Q96F45 646 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 MAGEB10Q96LZ2 347 aaPredicted RBP4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 CELF4Q9BZC1 486 aaKnown RBP4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 OR10A5Q9H207 317 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 KCNH7Q9NS40 1196 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 Q9UFV3 132 aa4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 PUF60Q9UHX1 559 aaKnown RBP4.83□□□□□ -1.64
LAPTM4A-202ENST00000483117 FOXP2O15409 715 aa4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 KCNA6P17658 529 aa4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 RGS19P49795 217 aa4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 FOXL1Q12952 345 aa4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 TMEM132BQ14DG7 1078 aa4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 TRIM61Q5EBN2 209 aa4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 GRAMD4Q6IC98 578 aa4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 ABHD17CQ6PCB6 329 aa4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 MAMDC4Q6UXC1 1216 aa4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 BRAPQ7Z569 592 aa4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 FGD2Q7Z6J4 655 aa4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 RTKN2Q8IZC4 609 aa4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 DLG3Q92796 817 aa4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 ERCC4Q92889 916 aaPredicted RBP4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 SRPK1Q96SB4 655 aaKnown RBP4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 OR10A2Q9H208 303 aa4.82□□□□□ -1.64
LAPTM4A-202ENST00000483117 SLC12A8A0AV02 714 aa4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 MSX2P35548 267 aaPredicted RBP4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 MEOX1P50221 254 aa4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 RBL2Q08999 1139 aa4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 ZC3H12BQ5HYM0 836 aaKnown RBP4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 CATSPEREQ5SY80 951 aa4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 LRP10Q7Z4F1 713 aa4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 GPR135Q8IZ08 494 aa4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 IGSF22Q8N9C0 903 aa4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 C8orf37Q96NL8 207 aa4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 CSRNP2Q9H175 543 aa4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 PODXL2Q9NZ53 605 aa4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 SFMBT1Q9UHJ3 866 aa4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 FAM184BQ9ULE4 1060 aa4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 ASB1Q9Y576 335 aa4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 B3GALT1Q9Y5Z6 326 aa4.81□□□□□ -1.64
LAPTM4A-202ENST00000483117 TCRBV16S1A1N1A0A5B0 115 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 GOLGA6L22H0YM25 854 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 APPP05067 770 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 C1SP09871 688 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 SDHAP31040 664 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 RPS19P39019 145 aaKnown RBP4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 IRF9Q00978 393 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 PTH1RQ03431 593 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 HGFACQ04756 655 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 C1orf210Q8IVY1 113 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 C2orf69Q8N8R5 385 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 IL17DQ8TAD2 202 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 FAM89AQ96GI7 184 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 TMEM176AQ96HP8 235 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms