RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 LRRC15Q8TF66 581 aa13.85□□□□□ -0.19
TSPAN1-208ENST00000482928 MAML3Q96JK9 1138 aa13.85□□□□□ -0.19
TSPAN1-208ENST00000482928 FGD4Q96M96 766 aa13.85□□□□□ -0.19
TSPAN1-208ENST00000482928 AZI2Q9H6S1 392 aa13.85□□□□□ -0.19
TSPAN1-208ENST00000482928 KCND2Q9NZV8 630 aa13.85□□□□□ -0.19
TSPAN1-208ENST00000482928 ZHX1Q9UKY1 873 aaPredicted RBP13.85□□□□□ -0.19
TSPAN1-208ENST00000482928 LOXHD1Q8IVV2 1947 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 PSMA7O14818 248 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 RHOBTB3O94955 611 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 XRCC6P12956 609 aaKnown RBP eCLIP13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 CYP11B2P19099 503 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 ERCC5P28715 1186 aaPredicted RBP13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 YWHABP31946 246 aaKnown RBP13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 PSMC6P62333 389 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 RAD51AP2Q09MP3 1159 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 PSMD2Q13200 908 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 LY6KQ17RY6 165 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 SWSAP1Q6NVH7 229 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 MAMDC4Q6UXC1 1216 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 C4orf19Q8IY42 314 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 APBA2Q99767 749 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 TINF2Q9BSI4 451 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 ABHD16BQ9H3Z7 469 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 ZNF302Q9NR11 478 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 DDX41Q9UJV9 622 aaKnown RBP13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 DBR1Q9UK59 544 aaKnown RBP13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 SYNRGQ9UMZ2 1314 aa13.84□□□□□ -0.19
TSPAN1-208ENST00000482928 CDH23Q9H251 3354 aa13.83□□□□□ -0.19
TSPAN1-208ENST00000482928 IKBKBO14920 756 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 LYPLA2O95372 231 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 GH1P01241 217 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 CCL5P13501 91 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 GAP43P17677 238 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 CYP2B6P20813 491 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 PAK1Q13153 545 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 XKR9Q5GH70 373 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 HERC4Q5GLZ8 1057 aaPredicted RBP13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 CELF3Q5SZQ8 465 aaKnown RBP13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 MORN1Q5T089 497 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 TRMT1LQ7Z2T5 733 aaKnown RBP13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 U2AF1L4Q8WU68 220 aaKnown RBP13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 SEPT1Q8WYJ6 367 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 SPATA33Q96N06 139 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 RNF208Q9H0X6 261 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 ANKEF1Q9NU02 776 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 CTNND2Q9UQB3 1225 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 COL4A3BPQ9Y5P4 624 aa13.83□□□□□ -0.2
TSPAN1-208ENST00000482928 NPHP3-ACAD11A0A0J9YXS1 232 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 KLRC4O43908 158 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 PSMC4P43686 418 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 SP2Q02086 613 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 CACNB1Q02641 598 aaPredicted RBP13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 COASYQ13057 564 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 ACVR2BQ13705 512 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 LAMC2Q13753 1193 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 FAM26FQ5R3K3 315 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 PADI6Q6TGC4 694 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 ABHD15Q6UXT9 468 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 STXBP4Q6ZWJ1 553 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 SMYD4Q8IYR2 804 aaPredicted RBP13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 NPLOC4Q8TAT6 608 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 GLG1Q92896 1179 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 TIPINQ9BVW5 301 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 SEPT9Q9UHD8 586 aaPredicted RBP13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 ODF2LQ9ULJ1 636 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 GDAQ9Y2T3 454 aa13.82□□□□□ -0.2
TSPAN1-208ENST00000482928 BICDL2A1A5D9 508 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 NKRFO15226 690 aaKnown RBP eCLIP13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 USO1O60763 962 aaKnown RBP13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 CDK11BP21127 795 aaKnown RBP13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 BMP6P22004 513 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 TCF7P36402 384 aaPredicted RBP13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 LACTBP83111 547 aaPredicted RBP13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 PRKCEQ02156 737 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 IQCB1Q15051 598 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 UGCGQ16739 394 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 XKR3Q5GH77 459 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 UTP14CQ5TAP6 766 aaKnown RBP13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 RINT1Q6NUQ1 792 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 DHX40Q8IX18 779 aaKnown RBP13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 MYCT1Q8N699 235 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 ANKRD20A12PQ8NF67 263 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 NELFBQ8WX92 580 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 DHTKD1Q96HY7 919 aaPredicted RBP13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 FAM167AQ96KS9 214 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 CEP170P1Q96L14 293 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 TSG101Q99816 390 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 REEP2Q9BRK0 252 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 RUSC1Q9BVN2 902 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 SLC39A2Q9NP94 309 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 NRBP2Q9NSY0 501 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 WRAP73Q9P2S5 460 aaPredicted RBP13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 RWDD2AQ9UIY3 292 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 MAPK8IP1Q9UQF2 711 aa13.81□□□□□ -0.2
TSPAN1-208ENST00000482928 ARIH2O95376 493 aa13.8□□□□□ -0.2
TSPAN1-208ENST00000482928 OATP04181 439 aa13.8□□□□□ -0.2
TSPAN1-208ENST00000482928 HOXC6P09630 235 aa13.8□□□□□ -0.2
TSPAN1-208ENST00000482928 HOXD10P28358 340 aa13.8□□□□□ -0.2
TSPAN1-208ENST00000482928 ADCYAP1R1P41586 468 aa13.8□□□□□ -0.2
TSPAN1-208ENST00000482928 PRCPP42785 496 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms