RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 TRPV2Q9Y5S1 764 aa18.66■□□□□ 0.58
VAMP4-204ENST00000482519 IGSF9BQ9UPX0 1349 aa18.66■□□□□ 0.58
VAMP4-204ENST00000482519 MICAL3Q7RTP6 2002 aa18.66■□□□□ 0.58
VAMP4-204ENST00000482519 SIP14410 1827 aa18.65■□□□□ 0.58
VAMP4-204ENST00000482519 ZNF862O60290 1169 aa18.65■□□□□ 0.58
VAMP4-204ENST00000482519 GJB5O95377 273 aa18.65■□□□□ 0.58
VAMP4-204ENST00000482519 IGFBP4P22692 258 aa18.65■□□□□ 0.58
VAMP4-204ENST00000482519 POTEDQ86YR6 584 aa18.65■□□□□ 0.58
VAMP4-204ENST00000482519 NME8Q8N427 588 aa18.65■□□□□ 0.58
VAMP4-204ENST00000482519 FAM184AQ8NB25 1140 aa18.65■□□□□ 0.58
VAMP4-204ENST00000482519 MAFAQ8NHW3 353 aaPredicted RBP18.65■□□□□ 0.58
VAMP4-204ENST00000482519 PPP1R16BQ96T49 567 aa18.65■□□□□ 0.58
VAMP4-204ENST00000482519 CELF4Q9BZC1 486 aaKnown RBP18.65■□□□□ 0.58
VAMP4-204ENST00000482519 CEP131Q9UPN4 1083 aa18.65■□□□□ 0.58
VAMP4-204ENST00000482519 EVPLQ92817 2033 aa18.65■□□□□ 0.58
VAMP4-204ENST00000482519 LCHNA4D1U4 455 aa18.64■□□□□ 0.57
VAMP4-204ENST00000482519 C22orf31O95567 290 aa18.64■□□□□ 0.57
VAMP4-204ENST00000482519 ATP2B1P20020 1258 aa18.64■□□□□ 0.57
VAMP4-204ENST00000482519 CD52P31358 61 aa18.64■□□□□ 0.57
VAMP4-204ENST00000482519 TSHZ1Q6ZSZ6 1077 aa18.64■□□□□ 0.57
VAMP4-204ENST00000482519 KIAA0319LQ8IZA0 1049 aa18.64■□□□□ 0.57
VAMP4-204ENST00000482519 BANK1Q8NDB2 785 aa18.64■□□□□ 0.57
VAMP4-204ENST00000482519 SLC17A8Q8NDX2 589 aa18.64■□□□□ 0.57
VAMP4-204ENST00000482519 RDM1Q8NG50 284 aa18.64■□□□□ 0.57
VAMP4-204ENST00000482519 ARNTL2Q8WYA1 636 aa18.64■□□□□ 0.57
VAMP4-204ENST00000482519 FAM20AQ96MK3 541 aa18.64■□□□□ 0.57
VAMP4-204ENST00000482519 RAD9AQ99638 391 aa18.64■□□□□ 0.57
VAMP4-204ENST00000482519 KCNMB3Q9NPA1 279 aa18.64■□□□□ 0.57
VAMP4-204ENST00000482519 LOXHD1Q8IVV2 1947 aa18.64■□□□□ 0.57
VAMP4-204ENST00000482519 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.63■□□□□ 0.57
VAMP4-204ENST00000482519 ARHGEF15O94989 841 aa18.63■□□□□ 0.57
VAMP4-204ENST00000482519 BAG4O95429 457 aaKnown RBP18.63■□□□□ 0.57
VAMP4-204ENST00000482519 HMGN5P82970 282 aaKnown RBP18.63■□□□□ 0.57
VAMP4-204ENST00000482519 TAP1Q03518 808 aa18.63■□□□□ 0.57
VAMP4-204ENST00000482519 PPM1EQ8WY54 764 aa18.63■□□□□ 0.57
VAMP4-204ENST00000482519 HAS1Q92839 578 aa18.63■□□□□ 0.57
VAMP4-204ENST00000482519 AGO3Q9H9G7 860 aaKnown RBP18.63■□□□□ 0.57
VAMP4-204ENST00000482519 SUGCTQ9HAC7 445 aa18.63■□□□□ 0.57
VAMP4-204ENST00000482519 SEPT9Q9UHD8 586 aaPredicted RBP18.63■□□□□ 0.57
VAMP4-204ENST00000482519 VAV3Q9UKW4 847 aa18.63■□□□□ 0.57
VAMP4-204ENST00000482519 TMEM150BA6NC51 233 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 DDX11L8A8MPP1 907 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 EML1O00423 815 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 MAGEB2O15479 319 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 VTNP04004 478 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 CLCN3P51790 818 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 PAK2Q13177 524 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 PPP2R5CQ13362 524 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 MKRN4PQ13434 485 aaPredicted RBP18.62■□□□□ 0.57
VAMP4-204ENST00000482519 GNL2Q13823 731 aaKnown RBP18.62■□□□□ 0.57
VAMP4-204ENST00000482519 TMEM266Q2M3C6 531 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 NCAPH2Q6IBW4 605 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 EFCAB12Q6NXP0 572 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 B3GNT9Q6UX72 402 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 SLFN12Q8IYM2 578 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 SH2D3AQ9BRG2 576 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 CDHR5Q9HBB8 845 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 MTUS1Q9ULD2 1270 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 PADI3Q9ULW8 664 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 AKT3Q9Y243 479 aa18.62■□□□□ 0.57
VAMP4-204ENST00000482519 RFXAPO00287 272 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 TBX3O15119 743 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 IBSPP21815 317 aaPredicted RBP18.61■□□□□ 0.57
VAMP4-204ENST00000482519 PSMC5P62195 406 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 TBC1D8BQ0IIM8 1120 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 NFX1Q12986 1120 aaKnown RBP18.61■□□□□ 0.57
VAMP4-204ENST00000482519 ADGRE1Q14246 886 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 CALCRLQ16602 461 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 KIZQ2M2Z5 673 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 MTERF2Q49AM1 385 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 XKR3Q5GH77 459 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 SPRED2Q7Z698 418 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 LRRC71Q8N4P6 559 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 USP38Q8NB14 1042 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 TOP1MTQ969P6 601 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 YME1L1Q96TA2 773 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 INSL6Q9Y581 213 aa18.61■□□□□ 0.57
VAMP4-204ENST00000482519 ENPP3O14638 875 aa18.6■□□□□ 0.57
VAMP4-204ENST00000482519 TMOD1P28289 359 aa18.6■□□□□ 0.57
VAMP4-204ENST00000482519 CCDC85BQ15834 202 aaPredicted RBP18.6■□□□□ 0.57
VAMP4-204ENST00000482519 FBXO18Q8NFZ0 1043 aa18.6■□□□□ 0.57
VAMP4-204ENST00000482519 TBC1D32Q96NH3 1257 aa18.6■□□□□ 0.57
VAMP4-204ENST00000482519 MAP7D2Q96T17 732 aa18.6■□□□□ 0.57
VAMP4-204ENST00000482519 OSMRQ99650 979 aa18.6■□□□□ 0.57
VAMP4-204ENST00000482519 CHD7Q9P2D1 2997 aa18.6■□□□□ 0.57
VAMP4-204ENST00000482519 SQORQ9Y6N5 450 aa18.6■□□□□ 0.57
VAMP4-204ENST00000482519 EPOPA6NHQ4 379 aa18.59■□□□□ 0.57
VAMP4-204ENST00000482519 WNT7AO00755 349 aa18.59■□□□□ 0.57
VAMP4-204ENST00000482519 NEMFO60524 1076 aa18.59■□□□□ 0.57
VAMP4-204ENST00000482519 RPS6KA5O75582 802 aa18.59■□□□□ 0.57
VAMP4-204ENST00000482519 CD2BP2O95400 341 aaKnown RBP18.59■□□□□ 0.57
VAMP4-204ENST00000482519 MCM7P33993 719 aa18.59■□□□□ 0.57
VAMP4-204ENST00000482519 QARSP47897 775 aaKnown RBP18.59■□□□□ 0.57
VAMP4-204ENST00000482519 MICALL1Q8N3F8 863 aa18.59■□□□□ 0.57
VAMP4-204ENST00000482519 TMX3Q96JJ7 454 aa18.59■□□□□ 0.57
VAMP4-204ENST00000482519 ZNF668Q96K58 619 aaPredicted RBP18.59■□□□□ 0.57
VAMP4-204ENST00000482519 SCLT1Q96NL6 688 aa18.59■□□□□ 0.57
VAMP4-204ENST00000482519 NIFKQ9BYG3 293 aaKnown RBP18.59■□□□□ 0.57
VAMP4-204ENST00000482519 PCDHA12Q9UN75 941 aa18.59■□□□□ 0.57
VAMP4-204ENST00000482519 KDM3AQ9Y4C1 1321 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms