RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 PTK2Q05397 1052 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 ASIC2Q16515 512 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 CDC37Q16543 378 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-220ENST00000482507 TTC19Q6DKK2 380 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-220ENST00000482507 MIGA2Q7L4E1 593 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 ZNF571Q7Z3V5 609 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-220ENST00000482507 SIAH1Q8IUQ4 282 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 CSRNP1Q96S65 589 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 RABEP2Q9H5N1 569 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 EPB41L5Q9HCM4 733 aa16.31■□□□□ 0.2
ATG4B-220ENST00000482507 AJAP1Q9UKB5 411 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-220ENST00000482507 HEXIM1O94992 359 aaKnown RBP16.3■□□□□ 0.2
ATG4B-220ENST00000482507 KRT18P05783 430 aaKnown RBP16.3■□□□□ 0.2
ATG4B-220ENST00000482507 EEF2P13639 858 aaKnown RBP16.3■□□□□ 0.2
ATG4B-220ENST00000482507 USP11P51784 963 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 PABPC4Q13310 644 aaKnown RBP eCLIP16.3■□□□□ 0.2
ATG4B-220ENST00000482507 EDRF1Q3B7T1 1238 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 GLE1Q53GS7 698 aaKnown RBP16.3■□□□□ 0.2
ATG4B-220ENST00000482507 DLK2Q6UY11 383 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 MTMR14Q8NCE2 650 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 LENG9Q96B70 501 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 KRT12Q99456 494 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 ATAD5Q96QE3 1844 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 HLA-DOAP06340 250 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 MYBP10242 640 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 PRR16Q569H4 304 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 DNAJC21Q5F1R6 531 aaKnown RBP16.3■□□□□ 0.2
ATG4B-220ENST00000482507 SFR1Q86XK3 245 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 RBM46Q8TBY0 533 aaKnown RBP16.3■□□□□ 0.2
ATG4B-220ENST00000482507 CASKIN2Q8WXE0 1202 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 IFT81Q8WYA0 676 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 PIK3R5Q8WYR1 880 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 REEP2Q9BRK0 252 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 PI4KBQ9UBF8 816 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 HACL1Q9UJ83 578 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 CNTNAP1P78357 1384 aa16.3■□□□□ 0.2
ATG4B-220ENST00000482507 RSPH10B2B2RC85 870 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 GOLGA8KD6RF30 607 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 CETN3O15182 167 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 KRT14P02533 472 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 RSPH10BP0C881 870 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 EPB41P11171 864 aaKnown RBP16.29■□□□□ 0.2
ATG4B-220ENST00000482507 ARHGAP4P98171 946 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 PPFIA1Q13136 1202 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 PTPROQ16827 1216 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 KCTD19Q17RG1 926 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-220ENST00000482507 EPM2AIP1Q7L775 607 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-220ENST00000482507 SH2D3CQ8N5H7 860 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 RNF14Q9UBS8 474 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 PITPNM2Q9BZ72 1349 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 FAM86B1E9PN63 330 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 FAM86B2P0C5J1 330 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 RASA3Q14644 834 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 ALS2CLQ60I27 953 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 CAPS2Q9BXY5 557 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 IKZF4Q9H2S9 585 aa16.29■□□□□ 0.2
ATG4B-220ENST00000482507 SIPA1L1O43166 1804 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 PSME4Q14997 1843 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 ZNF233A6NK53 670 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 GRIN3BO60391 1043 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 AKAP3O75969 853 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 UCHL3P15374 230 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 PON1P27169 355 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 GUCY2FP51841 1108 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 CORO7P57737 925 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 KCNA1Q09470 495 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 ANGEL2Q5VTE6 544 aaKnown RBP16.28■□□□□ 0.2
ATG4B-220ENST00000482507 SLFN13Q68D06 897 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 IFT20Q8IY31 132 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 IQCKQ8N0W5 287 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 CCDC43Q96MW1 224 aaKnown RBP16.28■□□□□ 0.2
ATG4B-220ENST00000482507 NAP1L4Q99733 375 aaKnown RBP16.28■□□□□ 0.2
ATG4B-220ENST00000482507 TRAF3IP3Q9Y228 551 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 RAD51CO43502 376 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 HSF2BPO75031 334 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 ENTPD3O75355 529 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 NNTQ13423 1086 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 KNOP1Q1ED39 458 aaKnown RBP16.28■□□□□ 0.2
ATG4B-220ENST00000482507 KCTD16Q68DU8 428 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 CYP2W1Q8TAV3 490 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 FAM151AQ8WW52 585 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 TMEM59LQ9UK28 342 aa16.28■□□□□ 0.2
ATG4B-220ENST00000482507 SBF1O95248 1867 aa16.27■□□□□ 0.2
ATG4B-220ENST00000482507 OPA1O60313 960 aa16.27■□□□□ 0.2
ATG4B-220ENST00000482507 GDF11O95390 407 aa16.27■□□□□ 0.2
ATG4B-220ENST00000482507 ZBTB48P10074 688 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-220ENST00000482507 CCT5P48643 541 aa16.27■□□□□ 0.2
ATG4B-220ENST00000482507 CASP4P49662 377 aa16.27■□□□□ 0.2
ATG4B-220ENST00000482507 GNGT1P63211 74 aa16.27■□□□□ 0.2
ATG4B-220ENST00000482507 RRP1BQ14684 758 aaKnown RBP16.27■□□□□ 0.2
ATG4B-220ENST00000482507 SLC30A10Q6XR72 485 aa16.27■□□□□ 0.2
ATG4B-220ENST00000482507 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
ATG4B-220ENST00000482507 SLFN12Q8IYM2 578 aa16.27■□□□□ 0.2
ATG4B-220ENST00000482507 SYT2Q8N9I0 419 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-220ENST00000482507 USP38Q8NB14 1042 aa16.27■□□□□ 0.2
ATG4B-220ENST00000482507 SIX2Q9NPC8 291 aa16.27■□□□□ 0.2
ATG4B-220ENST00000482507 LUC7LQ9NQ29 371 aaKnown RBP16.27■□□□□ 0.2
ATG4B-220ENST00000482507 ARMCX3Q9UH62 379 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-220ENST00000482507 FZD1Q9UP38 647 aa16.27■□□□□ 0.2
ATG4B-220ENST00000482507 ASTN1O14525 1302 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms