RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	AGO3	Q9H9G7	860 aa	Known RBP	5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	FBXO10	Q9UK96	956 aa		5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	FAM184B	Q9ULE4	1060 aa		5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	TRAV20	A0A0B4J274	112 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	AMY2A	P04746	511 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	KRT4	P19013	534 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	AMY2B	P19961	511 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	AOAH	P28039	575 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	MEOX1	P50221	254 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	ZC3H6	P61129	1189 aa	Known RBP	5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	HGFAC	Q04756	655 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	CRHR2	Q13324	411 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	TRIM68	Q6AZZ1	485 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	CXXC5	Q7LFL8	322 aa	Known RBP	5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	OSTM1	Q86WC4	334 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	CKAP2L	Q8IYA6	745 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	SHCBP1	Q8NEM2	672 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	ST13P5	Q8NFI4	369 aa	Predicted RBP	5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	TANGO6	Q9C0B7	1094 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	BTBD7	Q9P203	1132 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	PFDN2	Q9UHV9	154 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	TNFRSF18	Q9Y5U5	241 aa		5.14	□□□□□ -1.59
CCNL1-223	ENST00000481173	RAMP2	O60895	175 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	MPIG6B	O95866	241 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	C4BPA	P04003	597 aa	Known RBP	5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	PYGM	P11217	842 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	STAT5B	P51692	787 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	JAM2	P57087	298 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	PAK1	Q13153	545 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	RRP1B	Q14684	758 aa	Known RBP	5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	STIL	Q15468	1287 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173		Q6ZPA2	131 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	EP400NL	Q6ZTU2	488 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	MTDH	Q86UE4	582 aa	Known RBP	5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	TMPRSS6	Q8IU80	811 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	LRRC47	Q8N1G4	583 aa	Known RBP	5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	WNK4	Q96J92	1243 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	TTPAL	Q9BTX7	342 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	SPATA9	Q9BWV2	254 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	AMN	Q9BXJ7	453 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	NELFA	Q9H3P2	528 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	CATSPERZ	Q9NTU4	200 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	PARPBP	Q9NWS1	579 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	UCKL1	Q9NWZ5	548 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173	CBLC	Q9ULV8	474 aa		5.13	□□□□□ -1.59
CCNL1-223	ENST00000481173		A0A0G2JNJ9	132 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	KRTAP23-1	A1A580	65 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	SLC26A4	O43511	780 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	ATP2B1	P20020	1258 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	GJA4	P35212	333 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	FSTL1	Q12841	308 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	FIGN	Q5HY92	759 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	DPY19L2P1	Q6NXN4	242 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	ADGRE4P	Q86SQ3	457 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	THEMIS	Q8N1K5	641 aa	Predicted RBP	5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	WDR48	Q8TAF3	677 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	FBXW5	Q969U6	566 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	BTBD2	Q9BX70	525 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	MSL2	Q9HCI7	577 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173		Q9UFV3	132 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	PCDHA8	Q9Y5H6	950 aa		5.12	□□□□□ -1.59
CCNL1-223	ENST00000481173	PDPK1	O15530	556 aa		5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	RPS6KA4	O75676	772 aa		5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	SRGAP2C	P0DJJ0	459 aa		5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	GTF2F1	P35269	517 aa	Known RBP eCLIP	5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	STAT3	P40763	770 aa		5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	ECE1	P42892	770 aa		5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	SLC25A3	Q00325	362 aa		5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	MOGS	Q13724	837 aa		5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	FAM209A	Q5JX71	171 aa		5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	FOXB2	Q5VYV0	432 aa		5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	KANK2	Q63ZY3	851 aa		5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	TMEM200B	Q69YZ2	307 aa		5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	PCDH19	Q8TAB3	1148 aa		5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	MSRB2	Q9Y3D2	182 aa		5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	SH3BP1	Q9Y3L3	701 aa		5.11	□□□□□ -1.59
CCNL1-223	ENST00000481173	CYP27B1	O15528	508 aa		5.1	□□□□□ -1.59
CCNL1-223	ENST00000481173	ADCY3	O60266	1144 aa		5.1	□□□□□ -1.59
CCNL1-223	ENST00000481173	DIAPH1	O60610	1272 aa	Known RBP	5.1	□□□□□ -1.59
CCNL1-223	ENST00000481173	MME	P08473	750 aa		5.1	□□□□□ -1.59
CCNL1-223	ENST00000481173	RIN1	Q13671	783 aa		5.1	□□□□□ -1.59
CCNL1-223	ENST00000481173	ACAP1	Q15027	740 aa		5.1	□□□□□ -1.59
CCNL1-223	ENST00000481173	SEC23A	Q15436	765 aa		5.1	□□□□□ -1.59
CCNL1-223	ENST00000481173	MTERF2	Q49AM1	385 aa		5.1	□□□□□ -1.59
CCNL1-223	ENST00000481173	DPH6	Q7L8W6	267 aa		5.1	□□□□□ -1.59
CCNL1-223	ENST00000481173	ULK2	Q8IYT8	1036 aa		5.1	□□□□□ -1.59
CCNL1-223	ENST00000481173	RPUSD2	Q8IZ73	545 aa	Known RBP	5.1	□□□□□ -1.59
CCNL1-223	ENST00000481173	CDC6	Q99741	560 aa		5.1	□□□□□ -1.59
CCNL1-223	ENST00000481173	OR10A5	Q9H207	317 aa		5.1	□□□□□ -1.59
CCNL1-223	ENST00000481173	ZNF561-AS1	K7EIQ3	104 aa		5.09	□□□□□ -1.59
CCNL1-223	ENST00000481173	AQP7	O14520	342 aa		5.09	□□□□□ -1.59
CCNL1-223	ENST00000481173	WNT9A	O14904	365 aa		5.09	□□□□□ -1.59
CCNL1-223	ENST00000481173	BMP5	P22003	454 aa		5.09	□□□□□ -1.59
CCNL1-223	ENST00000481173	SCNN1G	P51170	649 aa		5.09	□□□□□ -1.59
CCNL1-223	ENST00000481173	HERVK_113	P62684	666 aa		5.09	□□□□□ -1.59
CCNL1-223	ENST00000481173	ST5	P78524	1137 aa		5.09	□□□□□ -1.59
CCNL1-223	ENST00000481173	COL10A1	Q03692	680 aa		5.09	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms