RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 FAM117BQ6P1L5 589 aa22.68■■□□□ 1.22
VPS36-204ENST00000480923 MYOCDQ8IZQ8 938 aa22.68■■□□□ 1.22
VPS36-204ENST00000480923 FOSL2P15408 326 aa22.67■■□□□ 1.22
VPS36-204ENST00000480923 PPP2R5CQ13362 524 aa22.67■■□□□ 1.22
VPS36-204ENST00000480923 METTL13Q8N6R0 699 aa22.67■■□□□ 1.22
VPS36-204ENST00000480923 HAS1Q92839 578 aa22.67■■□□□ 1.22
VPS36-204ENST00000480923 CELF4Q9BZC1 486 aaKnown RBP22.67■■□□□ 1.22
VPS36-204ENST00000480923 PRDM12Q9H4Q4 367 aa22.67■■□□□ 1.22
VPS36-204ENST00000480923 VAV3Q9UKW4 847 aa22.67■■□□□ 1.22
VPS36-204ENST00000480923 EML1O00423 815 aa22.66■■□□□ 1.22
VPS36-204ENST00000480923 ATP2B1P20020 1258 aa22.66■■□□□ 1.22
VPS36-204ENST00000480923 GNL2Q13823 731 aaKnown RBP22.66■■□□□ 1.22
VPS36-204ENST00000480923 TSHZ1Q6ZSZ6 1077 aa22.66■■□□□ 1.22
VPS36-204ENST00000480923 SLFN12Q8IYM2 578 aa22.66■■□□□ 1.22
VPS36-204ENST00000480923 KIAA0319LQ8IZA0 1049 aa22.66■■□□□ 1.22
VPS36-204ENST00000480923 BANK1Q8NDB2 785 aa22.66■■□□□ 1.22
VPS36-204ENST00000480923 SEPT9Q9UHD8 586 aaPredicted RBP22.66■■□□□ 1.22
VPS36-204ENST00000480923 GINS2Q9Y248 185 aa22.66■■□□□ 1.22
VPS36-204ENST00000480923 MAGEB2O15479 319 aa22.65■■□□□ 1.22
VPS36-204ENST00000480923 GJB5O95377 273 aa22.65■■□□□ 1.22
VPS36-204ENST00000480923 CD2BP2O95400 341 aaKnown RBP22.65■■□□□ 1.22
VPS36-204ENST00000480923 CD52P31358 61 aa22.65■■□□□ 1.22
VPS36-204ENST00000480923 MKRN4PQ13434 485 aaPredicted RBP22.65■■□□□ 1.22
VPS36-204ENST00000480923 CALCRLQ16602 461 aa22.65■■□□□ 1.22
VPS36-204ENST00000480923 XKR3Q5GH77 459 aa22.65■■□□□ 1.22
VPS36-204ENST00000480923 NCAPH2Q6IBW4 605 aa22.65■■□□□ 1.22
VPS36-204ENST00000480923 FBXO18Q8NFZ0 1043 aa22.65■■□□□ 1.22
VPS36-204ENST00000480923 TMX3Q96JJ7 454 aa22.65■■□□□ 1.22
VPS36-204ENST00000480923 BACH2Q9BYV9 841 aa22.65■■□□□ 1.22
VPS36-204ENST00000480923 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.64■■□□□ 1.21
VPS36-204ENST00000480923 NEMFO60524 1076 aa22.64■■□□□ 1.21
VPS36-204ENST00000480923 MCM2P49736 904 aa22.64■■□□□ 1.21
VPS36-204ENST00000480923 CLCN3P51790 818 aa22.64■■□□□ 1.21
VPS36-204ENST00000480923 PSMC5P62195 406 aa22.64■■□□□ 1.21
VPS36-204ENST00000480923 USP38Q8NB14 1042 aa22.64■■□□□ 1.21
VPS36-204ENST00000480923 PPP1R16BQ96T49 567 aa22.64■■□□□ 1.21
VPS36-204ENST00000480923 GAS2L1Q99501 681 aaPredicted RBP22.64■■□□□ 1.21
VPS36-204ENST00000480923 RAD9AQ99638 391 aa22.64■■□□□ 1.21
VPS36-204ENST00000480923 FOXP1Q9H334 677 aaPredicted RBP22.64■■□□□ 1.21
VPS36-204ENST00000480923 AGO3Q9H9G7 860 aaKnown RBP22.64■■□□□ 1.21
VPS36-204ENST00000480923 SQORQ9Y6N5 450 aa22.64■■□□□ 1.21
VPS36-204ENST00000480923 KDM3AQ9Y4C1 1321 aa22.63■■□□□ 1.21
VPS36-204ENST00000480923 DDX11L8A8MPP1 907 aa22.63■■□□□ 1.21
VPS36-204ENST00000480923 WNT7AO00755 349 aa22.63■■□□□ 1.21
VPS36-204ENST00000480923 TMOD1P28289 359 aa22.63■■□□□ 1.21
VPS36-204ENST00000480923 TBC1D8BQ0IIM8 1120 aa22.63■■□□□ 1.21
VPS36-204ENST00000480923 PAK2Q13177 524 aa22.63■■□□□ 1.21
VPS36-204ENST00000480923 MTERF2Q49AM1 385 aa22.63■■□□□ 1.21
VPS36-204ENST00000480923 EFCAB12Q6NXP0 572 aa22.63■■□□□ 1.21
VPS36-204ENST00000480923 LRRC71Q8N4P6 559 aa22.63■■□□□ 1.21
VPS36-204ENST00000480923 MAP7D2Q96T17 732 aa22.63■■□□□ 1.21
VPS36-204ENST00000480923 CERS4Q9HA82 394 aa22.63■■□□□ 1.21
VPS36-204ENST00000480923 KIF3AQ9Y496 699 aa22.63■■□□□ 1.21
VPS36-204ENST00000480923 LCHNA4D1U4 455 aa22.62■■□□□ 1.21
VPS36-204ENST00000480923 TMEM150BA6NC51 233 aa22.62■■□□□ 1.21
VPS36-204ENST00000480923 DKC1O60832 514 aaKnown RBP eCLIP22.62■■□□□ 1.21
VPS36-204ENST00000480923 ARHGEF15O94989 841 aa22.62■■□□□ 1.21
VPS36-204ENST00000480923 UPP2O95045 317 aa22.62■■□□□ 1.21
VPS36-204ENST00000480923 VTNP04004 478 aa22.62■■□□□ 1.21
VPS36-204ENST00000480923 QARSP47897 775 aaKnown RBP22.62■■□□□ 1.21
VPS36-204ENST00000480923 TAP1Q03518 808 aa22.62■■□□□ 1.21
VPS36-204ENST00000480923 EPHA7Q15375 998 aa22.62■■□□□ 1.21
VPS36-204ENST00000480923 MAFAQ8NHW3 353 aaPredicted RBP22.62■■□□□ 1.21
VPS36-204ENST00000480923 NIFKQ9BYG3 293 aaKnown RBP22.62■■□□□ 1.21
VPS36-204ENST00000480923 SUGCTQ9HAC7 445 aa22.62■■□□□ 1.21
VPS36-204ENST00000480923 AKT3Q9Y243 479 aa22.62■■□□□ 1.21
VPS36-204ENST00000480923 GBF1Q92538 1859 aa22.62■■□□□ 1.21
VPS36-204ENST00000480923 STBD1O95210 358 aa22.61■■□□□ 1.21
VPS36-204ENST00000480923 P4HBP07237 508 aaKnown RBP22.61■■□□□ 1.21
VPS36-204ENST00000480923 MCM7P33993 719 aa22.61■■□□□ 1.21
VPS36-204ENST00000480923 TXKP42681 527 aa22.61■■□□□ 1.21
VPS36-204ENST00000480923 KIZQ2M2Z5 673 aa22.61■■□□□ 1.21
VPS36-204ENST00000480923 TOP1MTQ969P6 601 aa22.61■■□□□ 1.21
VPS36-204ENST00000480923 SH2D3AQ9BRG2 576 aa22.61■■□□□ 1.21
VPS36-204ENST00000480923 CDHR5Q9HBB8 845 aa22.61■■□□□ 1.21
VPS36-204ENST00000480923 PADI3Q9ULW8 664 aa22.61■■□□□ 1.21
VPS36-204ENST00000480923 PCDHA12Q9UN75 941 aa22.61■■□□□ 1.21
VPS36-204ENST00000480923 INSL6Q9Y581 213 aa22.61■■□□□ 1.21
VPS36-204ENST00000480923 IGFBP4P22692 258 aa22.6■■□□□ 1.21
VPS36-204ENST00000480923 SPIRE1Q08AE8 756 aa22.6■■□□□ 1.21
VPS36-204ENST00000480923 NFX1Q12986 1120 aaKnown RBP22.6■■□□□ 1.21
VPS36-204ENST00000480923 TARBP2Q15633 366 aaKnown RBP22.6■■□□□ 1.21
VPS36-204ENST00000480923 TMEM266Q2M3C6 531 aa22.6■■□□□ 1.21
VPS36-204ENST00000480923 NOSTRINQ8IVI9 506 aa22.6■■□□□ 1.21
VPS36-204ENST00000480923 ARNTL2Q8WYA1 636 aa22.6■■□□□ 1.21
VPS36-204ENST00000480923 DYDC2Q96IM9 177 aa22.6■■□□□ 1.21
VPS36-204ENST00000480923 OSMRQ99650 979 aa22.6■■□□□ 1.21
VPS36-204ENST00000480923 TTC12Q9H892 705 aaPredicted RBP22.6■■□□□ 1.21
VPS36-204ENST00000480923 ENPP3O14638 875 aa22.59■■□□□ 1.21
VPS36-204ENST00000480923 RPS6KA5O75582 802 aa22.59■■□□□ 1.21
VPS36-204ENST00000480923 CRYBB1P53674 252 aaPredicted RBP22.59■■□□□ 1.21
VPS36-204ENST00000480923 CYP4A11Q02928 519 aa22.59■■□□□ 1.21
VPS36-204ENST00000480923 PLA2G4FQ68DD2 849 aa22.59■■□□□ 1.21
VPS36-204ENST00000480923 LINC01465Q8N7H1 131 aa22.59■■□□□ 1.21
VPS36-204ENST00000480923 YME1L1Q96TA2 773 aa22.59■■□□□ 1.21
VPS36-204ENST00000480923 LXNQ9BS40 222 aa22.59■■□□□ 1.21
VPS36-204ENST00000480923 FTHL17Q9BXU8 183 aa22.59■■□□□ 1.21
VPS36-204ENST00000480923 RGL1Q9NZL6 768 aa22.59■■□□□ 1.21
VPS36-204ENST00000480923 NOL7Q9UMY1 257 aaKnown RBP22.59■■□□□ 1.21
VPS36-204ENST00000480923 NOC2LQ9Y3T9 749 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms