RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 DPCR1Q3MIW9 517 aa19.54■□□□□ 0.72
UPF3A-206ENST00000480362 CCDC65Q8IXS2 484 aa19.54■□□□□ 0.72
UPF3A-206ENST00000480362 CEP170P1Q96L14 293 aa19.54■□□□□ 0.72
UPF3A-206ENST00000480362 NIFKQ9BYG3 293 aaKnown RBP19.54■□□□□ 0.72
UPF3A-206ENST00000480362 DNAJC25Q9H1X3 360 aa19.54■□□□□ 0.72
UPF3A-206ENST00000480362 EXOC1Q9NV70 894 aa19.54■□□□□ 0.72
UPF3A-206ENST00000480362 PANK4Q9NVE7 773 aa19.54■□□□□ 0.72
UPF3A-206ENST00000480362 KCND2Q9NZV8 630 aa19.54■□□□□ 0.72
UPF3A-206ENST00000480362 LOXHD1Q8IVV2 1947 aa19.54■□□□□ 0.72
UPF3A-206ENST00000480362 A6NJR5 290 aa19.53■□□□□ 0.72
UPF3A-206ENST00000480362 SEPT4O43236 478 aa19.53■□□□□ 0.72
UPF3A-206ENST00000480362 DUSP11O75319 330 aaKnown RBP19.53■□□□□ 0.72
UPF3A-206ENST00000480362 RHOBTB3O94955 611 aa19.53■□□□□ 0.72
UPF3A-206ENST00000480362 MARK3P27448 753 aa19.53■□□□□ 0.72
UPF3A-206ENST00000480362 CCND3P30281 292 aaPredicted RBP19.53■□□□□ 0.72
UPF3A-206ENST00000480362 SLC26A2P50443 739 aa19.53■□□□□ 0.72
UPF3A-206ENST00000480362 PLCB4Q15147 1175 aa19.53■□□□□ 0.72
UPF3A-206ENST00000480362 DGKDQ16760 1214 aa19.53■□□□□ 0.72
UPF3A-206ENST00000480362 C11orf57Q6ZUT1 292 aaPredicted RBP19.53■□□□□ 0.72
UPF3A-206ENST00000480362 FAM167AQ96KS9 214 aa19.53■□□□□ 0.72
UPF3A-206ENST00000480362 REEP2Q9BRK0 252 aa19.53■□□□□ 0.72
UPF3A-206ENST00000480362 POLD4Q9HCU8 107 aa19.53■□□□□ 0.72
UPF3A-206ENST00000480362 CYP26B1Q9NR63 512 aa19.53■□□□□ 0.72
UPF3A-206ENST00000480362 USO1O60763 962 aaKnown RBP19.52■□□□□ 0.72
UPF3A-206ENST00000480362 HOXD8P13378 290 aaPredicted RBP19.52■□□□□ 0.72
UPF3A-206ENST00000480362 GUCY2CP25092 1073 aa19.52■□□□□ 0.72
UPF3A-206ENST00000480362 IRX5P78411 483 aaPredicted RBP19.52■□□□□ 0.72
UPF3A-206ENST00000480362 MTERF2Q49AM1 385 aa19.52■□□□□ 0.72
UPF3A-206ENST00000480362 MAP3K21Q5TCX8 1036 aa19.52■□□□□ 0.72
UPF3A-206ENST00000480362 ZNF658Q5TYW1 1059 aaPredicted RBP19.52■□□□□ 0.72
UPF3A-206ENST00000480362 SLAIN1Q8ND83 568 aa19.52■□□□□ 0.72
UPF3A-206ENST00000480362 BBXQ8WY36 941 aaPredicted RBP19.52■□□□□ 0.72
UPF3A-206ENST00000480362 C16orf70Q9BSU1 422 aa19.52■□□□□ 0.72
UPF3A-206ENST00000480362 ZHX3Q9H4I2 956 aa19.52■□□□□ 0.72
UPF3A-206ENST00000480362 ERAP1Q9NZ08 941 aa19.52■□□□□ 0.72
UPF3A-206ENST00000480362 PTCH2Q9Y6C5 1203 aa19.52■□□□□ 0.72
UPF3A-206ENST00000480362 RSPH10B2B2RC85 870 aa19.51■□□□□ 0.71
UPF3A-206ENST00000480362 RSPH10BP0C881 870 aa19.51■□□□□ 0.71
UPF3A-206ENST00000480362 ZNF286BP0CG31 522 aa19.51■□□□□ 0.71
UPF3A-206ENST00000480362 GRK4P32298 578 aa19.51■□□□□ 0.71
UPF3A-206ENST00000480362 COASYQ13057 564 aa19.51■□□□□ 0.71
UPF3A-206ENST00000480362 PSMD2Q13200 908 aa19.51■□□□□ 0.71
UPF3A-206ENST00000480362 MAEAQ7L5Y9 396 aa19.51■□□□□ 0.71
UPF3A-206ENST00000480362 MLKLQ8NB16 471 aa19.51■□□□□ 0.71
UPF3A-206ENST00000480362 ATP8B4Q8TF62 1192 aa19.51■□□□□ 0.71
UPF3A-206ENST00000480362 RBSNQ9H1K0 784 aa19.51■□□□□ 0.71
UPF3A-206ENST00000480362 FRMD3A2A2Y4 597 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 SFI1A8K8P3 1242 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 H3BRB1 525 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 TBCAO75347 108 aaKnown RBP19.5■□□□□ 0.71
UPF3A-206ENST00000480362 FAM13AO94988 1023 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 RARBP10826 455 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 CPT1AP50416 773 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 GJA9P57773 515 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 BEX3Q00994 111 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 EHHADHQ08426 723 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 BRDTQ58F21 947 aaPredicted RBP19.5■□□□□ 0.71
UPF3A-206ENST00000480362 HERC4Q5GLZ8 1057 aaPredicted RBP19.5■□□□□ 0.71
UPF3A-206ENST00000480362 SMYD4Q8IYR2 804 aaPredicted RBP19.5■□□□□ 0.71
UPF3A-206ENST00000480362 HPS3Q969F9 1004 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 RNPEPQ9H4A4 650 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 TUT1Q9H6E5 874 aaKnown RBP19.5■□□□□ 0.71
UPF3A-206ENST00000480362 ODF2LQ9ULJ1 636 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 PTPN22Q9Y2R2 807 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 GDAQ9Y2T3 454 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 COL4A3BPQ9Y5P4 624 aa19.5■□□□□ 0.71
UPF3A-206ENST00000480362 HBP1O60381 514 aa19.49■□□□□ 0.71
UPF3A-206ENST00000480362 HIP1RO75146 1068 aa19.49■□□□□ 0.71
UPF3A-206ENST00000480362 DGAT1O75907 488 aa19.49■□□□□ 0.71
UPF3A-206ENST00000480362 CAVIN2O95810 425 aa19.49■□□□□ 0.71
UPF3A-206ENST00000480362 INHAP05111 366 aa19.49■□□□□ 0.71
UPF3A-206ENST00000480362 ZNF165P49910 485 aa19.49■□□□□ 0.71
UPF3A-206ENST00000480362 STK4Q13043 487 aa19.49■□□□□ 0.71
UPF3A-206ENST00000480362 TARBP2Q15633 366 aaKnown RBP19.49■□□□□ 0.71
UPF3A-206ENST00000480362 FSCN1Q16658 493 aaKnown RBP19.49■□□□□ 0.71
UPF3A-206ENST00000480362 RNF214Q8ND24 703 aa19.49■□□□□ 0.71
UPF3A-206ENST00000480362 CEP89Q96ST8 783 aa19.49■□□□□ 0.71
UPF3A-206ENST00000480362 TIPINQ9BVW5 301 aa19.49■□□□□ 0.71
UPF3A-206ENST00000480362 GTPBP4Q9BZE4 634 aaKnown RBP19.49■□□□□ 0.71
UPF3A-206ENST00000480362 NAT10Q9H0A0 1025 aaKnown RBP19.49■□□□□ 0.71
UPF3A-206ENST00000480362 UPF3AQ9H1J1 476 aaKnown RBP19.49■□□□□ 0.71
UPF3A-206ENST00000480362 SLC39A2Q9NP94 309 aa19.49■□□□□ 0.71
UPF3A-206ENST00000480362 PDLIM7Q9NR12 457 aa19.49■□□□□ 0.71
UPF3A-206ENST00000480362 DACH1Q9UI36 760 aa19.49■□□□□ 0.71
UPF3A-206ENST00000480362 ZNF215Q9UL58 517 aaPredicted RBP19.49■□□□□ 0.71
UPF3A-206ENST00000480362 TRPC6Q9Y210 931 aa19.49■□□□□ 0.71
UPF3A-206ENST00000480362 GOLGA6L3A6NEY3 463 aa19.48■□□□□ 0.71
UPF3A-206ENST00000480362 PPP1R3GB7ZBB8 358 aa19.48■□□□□ 0.71
UPF3A-206ENST00000480362 MYL3P08590 195 aa19.48■□□□□ 0.71
UPF3A-206ENST00000480362 C6orf222P0C671 652 aaPredicted RBP19.48■□□□□ 0.71
UPF3A-206ENST00000480362 CD44P16070 742 aaKnown RBP19.48■□□□□ 0.71
UPF3A-206ENST00000480362 GAP43P17677 238 aa19.48■□□□□ 0.71
UPF3A-206ENST00000480362 MAPK7Q13164 816 aa19.48■□□□□ 0.71
UPF3A-206ENST00000480362 FAM26FQ5R3K3 315 aa19.48■□□□□ 0.71
UPF3A-206ENST00000480362 SFR1Q86XK3 245 aa19.48■□□□□ 0.71
UPF3A-206ENST00000480362 DAW1Q8N136 415 aa19.48■□□□□ 0.71
UPF3A-206ENST00000480362 MYCT1Q8N699 235 aa19.48■□□□□ 0.71
UPF3A-206ENST00000480362 SPC25Q9HBM1 224 aa19.48■□□□□ 0.71
UPF3A-206ENST00000480362 CBX8Q9HC52 389 aa19.48■□□□□ 0.71
UPF3A-206ENST00000480362 TBC1D7Q9P0N9 293 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms