RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 KDM3AQ9Y4C1 1321 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 DENND3A2RUS2 1198 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 FAM86C2PA6NEL3 165 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 ZBTB42B2RXF5 422 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 CHMP2AO43633 222 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 MGEA5O60502 916 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 C22orf31O95567 290 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 MMP1P03956 469 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 VTNP04004 478 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 RB1P06400 928 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 PSAPP07602 524 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 STAG3L1P0CL83 205 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 ATP4AP20648 1035 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 PSMA5P28066 241 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 GNA11P29992 359 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 CLCN3P51790 818 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 HYAL1Q12794 435 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 NFX1Q12986 1120 aaKnown RBP7.57□□□□□ -1.2
FN1-220ENST00000480024 CLUL1Q15846 466 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 KIZQ2M2Z5 673 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 ZNF484Q5JVG2 852 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 MCTP2Q6DN12 878 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 ZNF746Q6NUN9 644 aaPredicted RBP7.57□□□□□ -1.2
FN1-220ENST00000480024 RTN4RL1Q86UN2 441 aaPredicted RBP7.57□□□□□ -1.2
FN1-220ENST00000480024 FAM178BQ8IXR5 827 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 CMTR2Q8IYT2 770 aaKnown RBP7.57□□□□□ -1.2
FN1-220ENST00000480024 KIAA0319LQ8IZA0 1049 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 GJD3Q8N144 294 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 METTL13Q8N6R0 699 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 BICD2Q8TD16 824 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 NEK9Q8TD19 979 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 TMEM40Q8WWA1 233 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 PABPC5Q96DU9 382 aaKnown RBP7.57□□□□□ -1.2
FN1-220ENST00000480024 OSMRQ99650 979 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 RNF26Q9BY78 433 aaPredicted RBP7.57□□□□□ -1.2
FN1-220ENST00000480024 AGXT2Q9BYV1 514 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 CDHR5Q9HBB8 845 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 ERVK-5Q9HDB9 667 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 ALG13Q9NP73 1137 aaKnown RBP7.57□□□□□ -1.2
FN1-220ENST00000480024 TBC1D22BQ9NU19 505 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 GABBR1Q9UBS5 961 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 LRFN2Q9ULH4 789 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 NOC2LQ9Y3T9 749 aaKnown RBP7.57□□□□□ -1.2
FN1-220ENST00000480024 SAMM50Q9Y512 469 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 SQORQ9Y6N5 450 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 C5orf42Q9H799 3197 aa7.57□□□□□ -1.2
FN1-220ENST00000480024 GRXCR2A6NFK2 248 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 WDR64B1ANS9 1081 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 MSH4O15457 936 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 LINC01565O15544 149 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 RPS6KA5O75582 802 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 ITGB1P05556 798 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 IFNAR1P17181 557 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 PDIA3P30101 505 aaKnown RBP7.56□□□□□ -1.2
FN1-220ENST00000480024 GTF2F1P35269 517 aaKnown RBP eCLIP7.56□□□□□ -1.2
FN1-220ENST00000480024 SARSP49591 514 aaKnown RBP7.56□□□□□ -1.2
FN1-220ENST00000480024 NLRP5P59047 1200 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 PRKCEQ02156 737 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 STK3Q13188 491 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 TOB2Q14106 344 aaPredicted RBP7.56□□□□□ -1.2
FN1-220ENST00000480024 COL19A1Q14993 1142 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 NTRK3Q16288 839 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 UGCGQ16739 394 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 TMEM31Q5JXX7 168 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 SMAP1Q8IYB5 467 aaPredicted RBP7.56□□□□□ -1.2
FN1-220ENST00000480024 TRIM22Q8IYM9 498 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 CRIPAKQ8N1N5 446 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 NME8Q8N427 588 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 FBXL16Q8N461 479 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 KLHL23Q8NBE8 558 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 BBXQ8WY36 941 aaPredicted RBP7.56□□□□□ -1.2
FN1-220ENST00000480024 GJA10Q969M2 543 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 LENG9Q96B70 501 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 ADAM2Q99965 735 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 LARP6Q9BRS8 491 aaKnown RBP7.56□□□□□ -1.2
FN1-220ENST00000480024 PLVAPQ9BX97 442 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 UPF3BQ9BZI7 483 aaKnown RBP7.56□□□□□ -1.2
FN1-220ENST00000480024 LMAN2LQ9H0V9 348 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 IGFLR1Q9H665 355 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 HCSTQ9UBK5 93 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 ST3GAL5Q9UNP4 418 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 PLAGL2Q9UPG8 496 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 AKT3Q9Y243 479 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 PCDHA10Q9Y5I2 948 aa7.56□□□□□ -1.2
FN1-220ENST00000480024 MAFBQ9Y5Q3 323 aaPredicted RBP7.56□□□□□ -1.2
FN1-220ENST00000480024 TBKBP1A7MCY6 615 aa7.55□□□□□ -1.2
FN1-220ENST00000480024 CPLX1O14810 134 aa7.55□□□□□ -1.2
FN1-220ENST00000480024 GPR182O15218 404 aa7.55□□□□□ -1.2
FN1-220ENST00000480024 GAS7O60861 476 aa7.55□□□□□ -1.2
FN1-220ENST00000480024 TBX10O75333 385 aa7.55□□□□□ -1.2
FN1-220ENST00000480024 OATP04181 439 aa7.55□□□□□ -1.2
FN1-220ENST00000480024 FGFR1P11362 822 aa7.55□□□□□ -1.2
FN1-220ENST00000480024 DNAJB1P25685 340 aa7.55□□□□□ -1.2
FN1-220ENST00000480024 CIITAP33076 1130 aa7.55□□□□□ -1.2
FN1-220ENST00000480024 IRS1P35568 1242 aa7.55□□□□□ -1.2
FN1-220ENST00000480024 LTBRP36941 435 aa7.55□□□□□ -1.2
FN1-220ENST00000480024 NDUFV1P49821 464 aa7.55□□□□□ -1.2
FN1-220ENST00000480024 ZP2Q05996 745 aa7.55□□□□□ -1.2
FN1-220ENST00000480024 DLX2Q07687 328 aaPredicted RBP7.55□□□□□ -1.2
FN1-220ENST00000480024 SSRP1Q08945 709 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms