RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	KCND2	Q9NZV8	630 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	GABRQ	Q9UN88	632 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	PCDHA2	Q9Y5H9	948 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	USO1	O60763	962 aa	Known RBP	12.44	□□□□□ -0.42
APTX-223	ENST00000479656	TBCA	O75347	108 aa	Known RBP	12.44	□□□□□ -0.42
APTX-223	ENST00000479656	FAM13A	O94988	1023 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	GH1	P01241	217 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	GUCY2C	P25092	1073 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	CAP1	Q01518	475 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	PAK1	Q13153	545 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	STIM1	Q13586	685 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	FAM160B1	Q5W0V3	765 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	OLFML2B	Q68BL8	750 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	SFR1	Q86XK3	245 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.44	□□□□□ -0.42
APTX-223	ENST00000479656	RWDD2A	Q9UIY3	292 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	NFE2L3	Q9Y4A8	694 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	COL4A3BP	Q9Y5P4	624 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	HIP1R	O75146	1068 aa		12.43	□□□□□ -0.42
APTX-223	ENST00000479656	ADCY5	O95622	1261 aa		12.43	□□□□□ -0.42
APTX-223	ENST00000479656	PMS1	P54277	932 aa	Known RBP	12.43	□□□□□ -0.42
APTX-223	ENST00000479656	TPM4	P67936	248 aa		12.43	□□□□□ -0.42
APTX-223	ENST00000479656	DUSP28	Q4G0W2	176 aa		12.43	□□□□□ -0.42
APTX-223	ENST00000479656	COBLL1	Q53SF7	1204 aa		12.43	□□□□□ -0.42
APTX-223	ENST00000479656	HSP90AA4P	Q58FG1	418 aa		12.43	□□□□□ -0.42
APTX-223	ENST00000479656	SPATA1	Q5VX52	437 aa		12.43	□□□□□ -0.42
APTX-223	ENST00000479656	MYCT1	Q8N699	235 aa		12.43	□□□□□ -0.42
APTX-223	ENST00000479656	AFAP1L1	Q8TED9	768 aa		12.43	□□□□□ -0.42
APTX-223	ENST00000479656	GLG1	Q92896	1179 aa		12.43	□□□□□ -0.42
APTX-223	ENST00000479656	DHTKD1	Q96HY7	919 aa	Predicted RBP	12.43	□□□□□ -0.42
APTX-223	ENST00000479656	CFHR5	Q9BXR6	569 aa		12.43	□□□□□ -0.42
APTX-223	ENST00000479656	AZI2	Q9H6S1	392 aa		12.43	□□□□□ -0.42
APTX-223	ENST00000479656	SAMSN1	Q9NSI8	373 aa	Known RBP	12.43	□□□□□ -0.42
APTX-223	ENST00000479656	ODF2L	Q9ULJ1	636 aa		12.43	□□□□□ -0.42
APTX-223	ENST00000479656	SYNRG	Q9UMZ2	1314 aa		12.43	□□□□□ -0.42
APTX-223	ENST00000479656	TRIM49B	A6NDI0	452 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	PSMA7	O14818	248 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	ADCY6	O43306	1168 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	LGR5	O75473	907 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	IGHA2	P01877	340 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	OAT	P04181	439 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	ZNF865	P0CJ78	1059 aa	Predicted RBP	12.42	□□□□□ -0.42
APTX-223	ENST00000479656	FLT3LG	P49771	235 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	TNFAIP2	Q03169	654 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	MAPK7	Q13164	816 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	KIF22	Q14807	665 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	MTERF2	Q49AM1	385 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	TRIM50	Q86XT4	487 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	DAW1	Q8N136	415 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	AFG1L	Q8WV93	481 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	PARVG	Q9HBI0	331 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	CYP26B1	Q9NR63	512 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	NRBP2	Q9NSY0	501 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	ZSWIM8	A7E2V4	1837 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	WDR81	Q562E7	1941 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	ATP1A3	P13637	1013 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	GAP43	P17677	238 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	CCNE1	P24864	410 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	MARK3	P27448	753 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	PPP1R2	P41236	205 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	CASP5	P51878	434 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	PRKCZ	Q05513	592 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	TPD52L1	Q16890	204 aa	Predicted RBP	12.42	□□□□□ -0.42
APTX-223	ENST00000479656	ANKRD40	Q6AI12	368 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	PLPPR4	Q7Z2D5	763 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	MYOCD	Q8IZQ8	938 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	GUF1	Q8N442	669 aa	Known RBP	12.42	□□□□□ -0.42
APTX-223	ENST00000479656	P2RX5	Q93086	422 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	NIFK	Q9BYG3	293 aa	Known RBP	12.42	□□□□□ -0.42
APTX-223	ENST00000479656	SEMA6B	Q9H3T3	888 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	MRPL44	Q9H9J2	332 aa	Known RBP	12.42	□□□□□ -0.42
APTX-223	ENST00000479656	GPRC5C	Q9NQ84	441 aa		12.42	□□□□□ -0.42
APTX-223	ENST00000479656	MGAM	O43451	1857 aa		12.41	□□□□□ -0.42
APTX-223	ENST00000479656	NKRF	O15226	690 aa	Known RBP eCLIP	12.41	□□□□□ -0.42
APTX-223	ENST00000479656	DYNC1LI2	O43237	492 aa	Predicted RBP	12.41	□□□□□ -0.42
APTX-223	ENST00000479656	XRCC5	P13010	732 aa	Known RBP	12.41	□□□□□ -0.42
APTX-223	ENST00000479656	ZNF131	P52739	623 aa		12.41	□□□□□ -0.42
APTX-223	ENST00000479656	ODR4	Q5SWX8	454 aa		12.41	□□□□□ -0.42
APTX-223	ENST00000479656	FAM102B	Q5T8I3	360 aa		12.41	□□□□□ -0.42
APTX-223	ENST00000479656	CENPP	Q6IPU0	288 aa		12.41	□□□□□ -0.42
APTX-223	ENST00000479656	OR6J1	Q8NGC5	347 aa		12.41	□□□□□ -0.42
APTX-223	ENST00000479656	PPTC7	Q8NI37	304 aa		12.41	□□□□□ -0.42
APTX-223	ENST00000479656	SCFD1	Q8WVM8	642 aa		12.41	□□□□□ -0.42
APTX-223	ENST00000479656	EMID1	Q96A84	441 aa	Predicted RBP	12.41	□□□□□ -0.42
APTX-223	ENST00000479656	TRIM5	Q9C035	493 aa		12.41	□□□□□ -0.42
APTX-223	ENST00000479656	SMARCAD1	Q9H4L7	1026 aa		12.41	□□□□□ -0.42
APTX-223	ENST00000479656	PDLIM7	Q9NR12	457 aa		12.41	□□□□□ -0.42
APTX-223	ENST00000479656	MYB	P10242	640 aa		12.4	□□□□□ -0.42
APTX-223	ENST00000479656	CDK11B	P21127	795 aa	Known RBP	12.4	□□□□□ -0.42
APTX-223	ENST00000479656	NMT1	P30419	496 aa	Known RBP	12.4	□□□□□ -0.42
APTX-223	ENST00000479656	TTI2	Q6NXR4	508 aa		12.4	□□□□□ -0.42
APTX-223	ENST00000479656	SARM1	Q6SZW1	724 aa		12.4	□□□□□ -0.42
APTX-223	ENST00000479656	NELFCD	Q8IXH7	590 aa		12.4	□□□□□ -0.42
APTX-223	ENST00000479656	CD99L2	Q8TCZ2	262 aa		12.4	□□□□□ -0.42
APTX-223	ENST00000479656	OLFML3	Q9NRN5	406 aa		12.4	□□□□□ -0.42
APTX-223	ENST00000479656	GNE	Q9Y223	722 aa	Known RBP	12.4	□□□□□ -0.42
APTX-223	ENST00000479656	EMSY	Q7Z589	1322 aa		12.4	□□□□□ -0.42
APTX-223	ENST00000479656	LOXHD1	Q8IVV2	1947 aa		12.4	□□□□□ -0.42
APTX-223	ENST00000479656	BICDL2	A1A5D9	508 aa		12.4	□□□□□ -0.42
APTX-223	ENST00000479656	GPR25	O00155	361 aa		12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms