RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 MRPL43Q8N983 215 aaKnown RBP12.9□□□□□ -0.34
CCDC18-208ENST00000479653 GLG1Q92896 1179 aa12.9□□□□□ -0.34
CCDC18-208ENST00000479653 TMX1Q9H3N1 280 aa12.9□□□□□ -0.34
CCDC18-208ENST00000479653 CWH43Q9H720 699 aa12.9□□□□□ -0.34
CCDC18-208ENST00000479653 KCNK12Q9HB15 430 aa12.9□□□□□ -0.34
CCDC18-208ENST00000479653 CDV3Q9UKY7 258 aaKnown RBP12.9□□□□□ -0.34
CCDC18-208ENST00000479653 DDX19BQ9UMR2 479 aa12.9□□□□□ -0.34
CCDC18-208ENST00000479653 GINS2Q9Y248 185 aa12.9□□□□□ -0.34
CCDC18-208ENST00000479653 ANKRD11Q6UB99 2663 aaPredicted RBP12.89□□□□□ -0.35
CCDC18-208ENST00000479653 MBLAC1A4D2B0 266 aaPredicted RBP12.89□□□□□ -0.35
CCDC18-208ENST00000479653 C2orf71A6NGG8 1288 aa12.89□□□□□ -0.35
CCDC18-208ENST00000479653 FIBPO43427 364 aa12.89□□□□□ -0.35
CCDC18-208ENST00000479653 NARSO43776 548 aaKnown RBP12.89□□□□□ -0.35
CCDC18-208ENST00000479653 KINO60870 393 aaKnown RBP12.89□□□□□ -0.35
CCDC18-208ENST00000479653 CLASP2O75122 1294 aaKnown RBP12.89□□□□□ -0.35
CCDC18-208ENST00000479653 RPLP2P05387 115 aaKnown RBP12.89□□□□□ -0.35
CCDC18-208ENST00000479653 PARP1P09874 1014 aaKnown RBP12.89□□□□□ -0.35
CCDC18-208ENST00000479653 FGFR1P11362 822 aa12.89□□□□□ -0.35
CCDC18-208ENST00000479653 PDE4AP27815 886 aa12.89□□□□□ -0.35
CCDC18-208ENST00000479653 PBX3P40426 434 aa12.89□□□□□ -0.35
CCDC18-208ENST00000479653 MRPS9P82933 396 aaKnown RBP12.89□□□□□ -0.35
CCDC18-208ENST00000479653 TBC1D8BQ0IIM8 1120 aa12.89□□□□□ -0.35
CCDC18-208ENST00000479653 SMC1AQ14683 1233 aaKnown RBP12.89□□□□□ -0.35
CCDC18-208ENST00000479653 ASPRV1Q53RT3 343 aa12.89□□□□□ -0.35
CCDC18-208ENST00000479653 VARS2Q5ST30 1063 aaKnown RBP12.89□□□□□ -0.35
CCDC18-208ENST00000479653 OTOP3Q7RTS5 596 aa12.89□□□□□ -0.35
CCDC18-208ENST00000479653 DGKHQ86XP1 1220 aa12.89□□□□□ -0.35
CCDC18-208ENST00000479653 ADAM2Q99965 735 aa12.89□□□□□ -0.35
CCDC18-208ENST00000479653 CELF4Q9BZC1 486 aaKnown RBP12.89□□□□□ -0.35
CCDC18-208ENST00000479653 ATP6V0A4Q9HBG4 840 aa12.89□□□□□ -0.35
CCDC18-208ENST00000479653 ERAP1Q9NZ08 941 aa12.89□□□□□ -0.35
CCDC18-208ENST00000479653 IGSF9BQ9UPX0 1349 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 GPR179Q6PRD1 2367 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 SPDYE4A6NLX3 237 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 MGEA5O60502 916 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 CXCL14O95715 111 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 ADRB1P08588 477 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 GHRHRQ02643 423 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 SEMA3FQ13275 785 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 COL9A3Q14050 684 aaPredicted RBP12.88□□□□□ -0.35
CCDC18-208ENST00000479653 ALX1Q15699 326 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 ERICH6BQ5W0A0 696 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 KCNT2Q6UVM3 1135 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 TMC5Q6UXY8 1006 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 SLC24A5Q71RS6 500 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 C1orf210Q8IVY1 113 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 SAMD3Q8N6K7 520 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 GPR161Q8N6U8 529 aaKnown RBP12.88□□□□□ -0.35
CCDC18-208ENST00000479653 SUMF1Q8NBK3 374 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 ESR2Q92731 530 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 ZNF558Q96NG5 402 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 INPP4AQ96PE3 977 aaPredicted RBP12.88□□□□□ -0.35
CCDC18-208ENST00000479653 WNT16Q9UBV4 365 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 CA14Q9ULX7 337 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 PLXNA4Q9HCM2 1894 aa12.88□□□□□ -0.35
CCDC18-208ENST00000479653 PKD1L2Q7Z442 2459 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 KRBA1A5PL33 1030 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 RRN3P2A6NIE6 340 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 PRR5-ARHGAP8B1AHC4 643 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 PPP1R11O60927 126 aaPredicted RBP12.87□□□□□ -0.35
CCDC18-208ENST00000479653 STAM2O75886 525 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 INSRRP14616 1297 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 PPM1AP35813 382 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 ARHGAP8P85298 464 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 KRT76Q01546 638 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 BMS1Q14692 1282 aaKnown RBP12.87□□□□□ -0.35
CCDC18-208ENST00000479653 CCDC149Q6ZUS6 474 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 CABP7Q86V35 215 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 SEPT1Q8WYJ6 367 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 TBC1D17Q9HA65 648 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 RGS18Q9NS28 235 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 C1orf112Q9NSG2 853 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 DZANK1Q9NVP4 752 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 SPG21Q9NZD8 308 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 SIT1Q9Y3P8 196 aa12.87□□□□□ -0.35
CCDC18-208ENST00000479653 ZBTB5O15062 677 aa12.86□□□□□ -0.35
CCDC18-208ENST00000479653 RPS6KA5O75582 802 aa12.86□□□□□ -0.35
CCDC18-208ENST00000479653 EPCAMP16422 314 aa12.86□□□□□ -0.35
CCDC18-208ENST00000479653 LMNB2Q03252 620 aa12.86□□□□□ -0.35
CCDC18-208ENST00000479653 LRRC55Q6ZSA7 311 aa12.86□□□□□ -0.35
CCDC18-208ENST00000479653 IQCA1Q86XH1 822 aa12.86□□□□□ -0.35
CCDC18-208ENST00000479653 HOMER1Q86YM7 354 aa12.86□□□□□ -0.35
CCDC18-208ENST00000479653 GIMAP8Q8ND71 665 aaPredicted RBP12.86□□□□□ -0.35
CCDC18-208ENST00000479653 FEZF2Q8TBJ5 459 aa12.86□□□□□ -0.35
CCDC18-208ENST00000479653 SECISBP2LQ93073 1101 aaKnown RBP12.86□□□□□ -0.35
CCDC18-208ENST00000479653 SENP7Q9BQF6 1050 aa12.86□□□□□ -0.35
CCDC18-208ENST00000479653 RTKNQ9BST9 563 aa12.86□□□□□ -0.35
CCDC18-208ENST00000479653 SMARCAD1Q9H4L7 1026 aa12.86□□□□□ -0.35
CCDC18-208ENST00000479653 USP18Q9UMW8 372 aa12.86□□□□□ -0.35
CCDC18-208ENST00000479653 KIAA1671Q9BY89 1806 aa12.85□□□□□ -0.35
CCDC18-208ENST00000479653 C9IYK1 514 aa12.85□□□□□ -0.35
CCDC18-208ENST00000479653 CCDC178Q5BJE1 867 aa12.85□□□□□ -0.35
CCDC18-208ENST00000479653 NLRX1Q86UT6 975 aa12.85□□□□□ -0.35
CCDC18-208ENST00000479653 ABI1Q8IZP0 508 aa12.85□□□□□ -0.35
CCDC18-208ENST00000479653 STAG2Q8N3U4 1231 aa12.85□□□□□ -0.35
CCDC18-208ENST00000479653 RSAD2Q8WXG1 361 aa12.85□□□□□ -0.35
CCDC18-208ENST00000479653 CHMP4BQ9H444 224 aaKnown RBP12.85□□□□□ -0.35
CCDC18-208ENST00000479653 RNF41Q9H4P4 317 aaPredicted RBP12.85□□□□□ -0.35
CCDC18-208ENST00000479653 SH2B1Q9NRF2 756 aaPredicted RBP12.85□□□□□ -0.35
CCDC18-208ENST00000479653 TMEM161AQ9NX61 479 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms