RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 PARP14Q460N5 1801 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 MYH6P13533 1939 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 KLRF2D3W0D1 207 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 CPLX1O14810 134 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 SCAMP3O14828 347 aaKnown RBP7.12□□□□□ -1.27
SF3B1-209ENST00000479532 TLR2O60603 784 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 SNHG28P0DPA3 235 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 CYP2C8P10632 490 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 TARSP26639 723 aaKnown RBP7.12□□□□□ -1.27
SF3B1-209ENST00000479532 COPB2P35606 906 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 AKAP17AQ02040 695 aaKnown RBP7.12□□□□□ -1.27
SF3B1-209ENST00000479532 APOBRQ0VD83 1088 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 CRHR2Q13324 411 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 KIAA1755Q5JYT7 1200 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 SYDE2Q5VT97 1194 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 APOA5Q6Q788 366 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 LBX2Q6XYB7 198 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 JMYQ8N9B5 988 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 IPO4Q8TEX9 1081 aaKnown RBP7.12□□□□□ -1.27
SF3B1-209ENST00000479532 TNFRSF25Q93038 417 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 ZNF274Q96GC6 653 aaPredicted RBP7.12□□□□□ -1.27
SF3B1-209ENST00000479532 ZSCAN31Q96LW9 406 aaPredicted RBP7.12□□□□□ -1.27
SF3B1-209ENST00000479532 PAGR1Q9BTK6 254 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 AGXT2Q9BYV1 514 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 SLKQ9H2G2 1235 aaPredicted RBP7.12□□□□□ -1.27
SF3B1-209ENST00000479532 SEC63Q9UGP8 760 aaKnown RBP7.12□□□□□ -1.27
SF3B1-209ENST00000479532 RABGAP1Q9Y3P9 1069 aa7.12□□□□□ -1.27
SF3B1-209ENST00000479532 COL11A1P12107 1806 aaPredicted RBP7.11□□□□□ -1.27
SF3B1-209ENST00000479532 A0A0G2JMZ2 1700 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 MMP20O60882 483 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 CDKL5O76039 1030 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 KIF20AO95235 890 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 TBC1D8O95759 1140 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 SLC25A27O95847 323 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 GOLGA8HP0CJ92 632 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 RARAP10276 462 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 CES1P23141 567 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 EIF4BP23588 611 aaKnown RBP7.11□□□□□ -1.27
SF3B1-209ENST00000479532 SMARCA1P28370 1054 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 OAZ1P54368 228 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 AK2P54819 239 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 GP2P55259 537 aaKnown RBP7.11□□□□□ -1.27
SF3B1-209ENST00000479532 TROAPQ12815 778 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 TOB2Q14106 344 aaPredicted RBP7.11□□□□□ -1.27
SF3B1-209ENST00000479532 PLS1Q14651 629 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 FAM110CQ1W6H9 321 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 BTNL9Q6UXG8 535 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 NOL8Q76FK4 1167 aaKnown RBP7.11□□□□□ -1.27
SF3B1-209ENST00000479532 GALNT12Q8IXK2 581 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 CCDC144CPQ8IYA2 1237 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 ANKRD13CQ8N6S4 541 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 FANCBQ8NB91 859 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 GPRC5AQ8NFJ5 357 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 ATG4CQ96DT6 458 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 RRP36Q96EU6 259 aaKnown RBP7.11□□□□□ -1.27
SF3B1-209ENST00000479532 PNMA5Q96PV4 448 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 P2RX7Q99572 595 aaKnown RBP7.11□□□□□ -1.27
SF3B1-209ENST00000479532 MYL10Q9BUA6 226 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 SH2B1Q9NRF2 756 aaPredicted RBP7.11□□□□□ -1.27
SF3B1-209ENST00000479532 ZFATQ9P243 1243 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 KANSL3Q9P2N6 904 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 CPA4Q9UI42 421 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 MAD2L2Q9UI95 211 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 LIMCH1Q9UPQ0 1083 aa7.11□□□□□ -1.27
SF3B1-209ENST00000479532 NID2Q14112 1375 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 VWA5AO00534 786 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 FKTNO75072 461 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 HSPA1AP0DMV8 641 aaKnown RBP7.1□□□□□ -1.27
SF3B1-209ENST00000479532 HSPA1BP0DMV9 641 aaKnown RBP7.1□□□□□ -1.27
SF3B1-209ENST00000479532 RXRAP19793 462 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 NFKB1P19838 968 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 HOXD10P28358 340 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 PDIA3P30101 505 aaKnown RBP7.1□□□□□ -1.27
SF3B1-209ENST00000479532 SLC16A2P36021 539 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 CTCFP49711 727 aaPredicted RBP7.1□□□□□ -1.27
SF3B1-209ENST00000479532 EVCP57679 992 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 ERVK-24P63145 666 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 SP3Q02447 781 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 SPEM2Q0P670 501 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 STK3Q13188 491 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 CDC37Q16543 378 aaPredicted RBP7.1□□□□□ -1.27
SF3B1-209ENST00000479532 TKFCQ3LXA3 575 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 WDR78Q5VTH9 848 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 TTBK2Q6IQ55 1244 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 CCDC174Q6PII3 467 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 C20orf204Q6ZNR8 217 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 RAB11FIP4Q86YS3 637 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 ADGRF4Q8IZF3 695 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 WFDC12Q8WWY7 111 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 ANP32BQ92688 251 aaKnown RBP7.1□□□□□ -1.27
SF3B1-209ENST00000479532 PMEPA1Q969W9 287 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 CRELD1Q96HD1 420 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 ERO1AQ96HE7 468 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 SPZ1Q9BXG8 430 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 TEX13BQ9BXU2 312 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 OSBPL7Q9BZF2 842 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 UBA5Q9GZZ9 404 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 RANBP17Q9H2T7 1088 aaKnown RBP7.1□□□□□ -1.27
SF3B1-209ENST00000479532 C12orf49Q9H741 205 aa7.1□□□□□ -1.27
SF3B1-209ENST00000479532 SLC38A10Q9HBR0 1119 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms